RNA–Protein interactions for RNA: ENST00000602604.1

TMEM52-206, Transcript of transmembrane protein 52, humanhuman

TSL 3

Gene TMEM52, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM52-206ENST00000602604 NISCHQ9Y2I1 1504 aa52.97■■■■■ 6.07
TMEM52-206ENST00000602604 CCDC180Q9P1Z9 1646 aa47.31■■■■■ 5.16
TMEM52-206ENST00000602604 ABCC9O60706 1549 aa46.96■■■■■ 5.11
TMEM52-206ENST00000602604 RB1CC1Q8TDY2 1594 aa44.86■■■■■ 4.77
TMEM52-206ENST00000602604 DCAF8L2P0C7V8 631 aa44.65■■■■■ 4.74
TMEM52-206ENST00000602604 NACADO15069 1562 aa44.65■■■■■ 4.74
TMEM52-206ENST00000602604 MYO15BQ96JP2 1530 aa44.13■■■■■ 4.65
TMEM52-206ENST00000602604 ZCCHC6Q5VYS8 1495 aaKnown RBP43.98■■■■■ 4.63
TMEM52-206ENST00000602604 UNC13AQ9UPW8 1703 aa43.87■■■■■ 4.61
TMEM52-206ENST00000602604 PABPN1Q86U42 306 aaKnown RBP eCLIP43.83■■■■■ 4.61
TMEM52-206ENST00000602604 DCAF1Q9Y4B6 1507 aa43.74■■■■■ 4.59
TMEM52-206ENST00000602604 DNAJC5BQ9UF47 199 aa43.67■■■■■ 4.58
TMEM52-206ENST00000602604 BICRAQ9NZM4 1560 aa43.53■■■■■ 4.56
TMEM52-206ENST00000602604 SCRIBQ14160 1630 aa43.2■■■■■ 4.51
TMEM52-206ENST00000602604 SHROOM4Q9ULL8 1493 aa42.92■■■■■ 4.46
TMEM52-206ENST00000602604 EIF4G1Q04637 1599 aaKnown RBP42.43■■■■■ 4.38
TMEM52-206ENST00000602604 CC2D2AQ9P2K1 1620 aa42.42■■■■■ 4.38
TMEM52-206ENST00000602604 CECR2Q9BXF3 1484 aa42.23■■■■■ 4.35
TMEM52-206ENST00000602604 SMARCA4P51532 1647 aa41.23■■■■■ 4.19
TMEM52-206ENST00000602604 NCAPD3P42695 1498 aa41.21■■■■■ 4.19
TMEM52-206ENST00000602604 ATAD2BQ9ULI0 1458 aa41.16■■■■■ 4.18
TMEM52-206ENST00000602604 BAZ1AQ9NRL2 1556 aaPredicted RBP41.08■■■■■ 4.17
TMEM52-206ENST00000602604 SMARCA2P51531 1590 aa41.06■■■■■ 4.16
TMEM52-206ENST00000602604 HMGXB3Q12766 1538 aa40.93■■■■■ 4.14
TMEM52-206ENST00000602604 MROH2BQ7Z745 1585 aa40.84■■■■■ 4.13
TMEM52-206ENST00000602604 BAZ1BQ9UIG0 1483 aaKnown RBP40.8■■■■■ 4.12
TMEM52-206ENST00000602604 PEG3Q9GZU2 1588 aa40.79■■■■■ 4.12
TMEM52-206ENST00000602604 ERCC6Q03468 1493 aa40.51■■■■■ 4.08
TMEM52-206ENST00000602604 NESP48681 1621 aa40.46■■■■■ 4.07
TMEM52-206ENST00000602604 WIZO95785 1651 aa40.4■■■■■ 4.06
TMEM52-206ENST00000602604 CUX2O14529 1486 aa40.23■■■■■ 4.03
TMEM52-206ENST00000602604 LAMC3Q9Y6N6 1575 aa40.22■■■■■ 4.03
TMEM52-206ENST00000602604 RSF1Q96T23 1441 aaPredicted RBP40.16■■■■■ 4.02
TMEM52-206ENST00000602604 CADPSQ9ULU8 1353 aa40■■■■□ 3.99
TMEM52-206ENST00000602604 PDS5BQ9NTI5 1447 aa39.98■■■■□ 3.99
TMEM52-206ENST00000602604 KIF21AQ7Z4S6 1674 aa39.96■■■■□ 3.99
TMEM52-206ENST00000602604 THOC2Q8NI27 1593 aaKnown RBP39.92■■■■□ 3.98
TMEM52-206ENST00000602604 TOP2AP11388 1531 aaKnown RBP39.87■■■■□ 3.97
TMEM52-206ENST00000602604 DNAJC5Q9H3Z4 198 aa39.75■■■■□ 3.95
TMEM52-206ENST00000602604 CFTRP13569 1480 aa39.62■■■■□ 3.93
TMEM52-206ENST00000602604 MRC2Q9UBG0 1479 aa39.6■■■■□ 3.93
TMEM52-206ENST00000602604 FANCD2Q9BXW9 1451 aa39.55■■■■□ 3.92
TMEM52-206ENST00000602604 CEP164Q9UPV0 1460 aa39.55■■■■□ 3.92
TMEM52-206ENST00000602604 WDR62O43379 1518 aa39.48■■■■□ 3.91
TMEM52-206ENST00000602604 CCDC88BA6NC98 1476 aa39.45■■■■□ 3.91
TMEM52-206ENST00000602604 PRDM2Q13029 1718 aa39.28■■■■□ 3.88
TMEM52-206ENST00000602604 URB2Q14146 1524 aaKnown RBP39.19■■■■□ 3.86
TMEM52-206ENST00000602604 TOPBP1Q92547 1522 aa38.85■■■■□ 3.81
TMEM52-206ENST00000602604 SUPT5HO00267 1087 aaKnown RBP38.8■■■■□ 3.8
TMEM52-206ENST00000602604 ABCC8Q09428 1581 aa38.78■■■■□ 3.8
TMEM52-206ENST00000602604 DNMBPQ6XZF7 1577 aa38.74■■■■□ 3.79
TMEM52-206ENST00000602604 IFT140Q96RY7 1462 aa38.73■■■■□ 3.79
TMEM52-206ENST00000602604 ZNF608Q9ULD9 1512 aaPredicted RBP38.65■■■■□ 3.78
TMEM52-206ENST00000602604 OSCARQ8IYS5 282 aa38.54■■■■□ 3.76
TMEM52-206ENST00000602604 POLA1P09884 1462 aaPredicted RBP38.47■■■■□ 3.75
TMEM52-206ENST00000602604 TARBP1Q13395 1621 aaKnown RBP38.46■■■■□ 3.75
TMEM52-206ENST00000602604 EIF4G3O43432 1585 aaKnown RBP38.44■■■■□ 3.74
TMEM52-206ENST00000602604 AQRO60306 1485 aaKnown RBP eCLIP38.37■■■■□ 3.73
TMEM52-206ENST00000602604 RAD54L2Q9Y4B4 1467 aa38.36■■■■□ 3.73
TMEM52-206ENST00000602604 CUX1P39880 1505 aa38.34■■■■□ 3.73
TMEM52-206ENST00000602604 SOGA1O94964 1423 aa38.33■■■■□ 3.73
TMEM52-206ENST00000602604 FGD5Q6ZNL6 1462 aa38.31■■■■□ 3.72
TMEM52-206ENST00000602604 TRIM41Q8WV44 630 aa38.26■■■■□ 3.72
TMEM52-206ENST00000602604 TDRD9Q8NDG6 1382 aaKnown RBP38.21■■■■□ 3.71
TMEM52-206ENST00000602604 CHD1O14646 1710 aa38.1■■■■□ 3.69
TMEM52-206ENST00000602604 FBLN2P98095 1184 aa38.08■■■■□ 3.69
TMEM52-206ENST00000602604 WDR97A6NE52 1622 aa38.06■■■■□ 3.68
TMEM52-206ENST00000602604 SNAPC4Q5SXM2 1469 aa37.97■■■■□ 3.67
TMEM52-206ENST00000602604 RIMBP3CA6NJZ7 1639 aa37.96■■■■□ 3.67
TMEM52-206ENST00000602604 RIMBP3BA6NNM3 1639 aa37.96■■■■□ 3.67
TMEM52-206ENST00000602604 RIMBP3Q9UFD9 1639 aa37.96■■■■□ 3.67
TMEM52-206ENST00000602604 GRIN2BQ13224 1484 aa37.93■■■■□ 3.66
TMEM52-206ENST00000602604 WRNQ14191 1432 aaPredicted RBP eCLIP37.88■■■■□ 3.66
TMEM52-206ENST00000602604 ARHGEF11O15085 1522 aa37.88■■■■□ 3.65
TMEM52-206ENST00000602604 ABCA10Q8WWZ4 1543 aa37.87■■■■□ 3.65
TMEM52-206ENST00000602604 GAPVD1Q14C86 1478 aa37.87■■■■□ 3.65
TMEM52-206ENST00000602604 MAGI1Q96QZ7 1491 aaPredicted RBP37.87■■■■□ 3.65
TMEM52-206ENST00000602604 CHMP7Q8WUX9 453 aaPredicted RBP37.85■■■■□ 3.65
TMEM52-206ENST00000602604 TOP2BQ02880 1626 aa37.83■■■■□ 3.65
TMEM52-206ENST00000602604 BIVM-ERCC5R4GMW8 1640 aa37.83■■■■□ 3.65
TMEM52-206ENST00000602604 PBRM1Q86U86 1689 aa37.82■■■■□ 3.65
TMEM52-206ENST00000602604 SYNJ1O43426 1573 aa37.82■■■■□ 3.65
TMEM52-206ENST00000602604 ABCA5Q8WWZ7 1642 aa37.78■■■■□ 3.64
TMEM52-206ENST00000602604 SYNJ2O15056 1496 aa37.74■■■■□ 3.63
TMEM52-206ENST00000602604 CYB5RLQ6IPT4 315 aa37.64■■■■□ 3.62
TMEM52-206ENST00000602604 CLASP1Q7Z460 1538 aa37.63■■■■□ 3.61
TMEM52-206ENST00000602604 ARAP1Q96P48 1450 aa37.53■■■■□ 3.6
TMEM52-206ENST00000602604 ADAMTS12P58397 1594 aa37.46■■■■□ 3.59
TMEM52-206ENST00000602604 GRIN2AQ12879 1464 aa37.44■■■■□ 3.58
TMEM52-206ENST00000602604 ERICH3Q5RHP9 1530 aa37.41■■■■□ 3.58
TMEM52-206ENST00000602604 FHAD1B1AJZ9 1412 aa37.39■■■■□ 3.58
TMEM52-206ENST00000602604 CEP170Q5SW79 1584 aa37.29■■■■□ 3.56
TMEM52-206ENST00000602604 NUP160Q12769 1436 aa37.28■■■■□ 3.56
TMEM52-206ENST00000602604 KIF27Q86VH2 1401 aa37.13■■■■□ 3.53
TMEM52-206ENST00000602604 ERCC6L2Q5T890 1561 aa37.12■■■■□ 3.53
TMEM52-206ENST00000602604 TRHP20396 242 aaPredicted RBP37.09■■■■□ 3.53
TMEM52-206ENST00000602604 IGF1RP08069 1367 aa37.07■■■■□ 3.53
TMEM52-206ENST00000602604 SHROOM2Q13796 1616 aa37.07■■■■□ 3.52
TMEM52-206ENST00000602604 JPH4Q96JJ6 628 aa36.96■■■■□ 3.51
TMEM52-206ENST00000602604 CUL7Q14999 1698 aa36.96■■■■□ 3.51
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms