RNA–Protein interactions for RNA: ENST00000602439.5

SFXN2-205, Transcript of sideroflexin 2, humanhuman

TSL 4

Gene SFXN2, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-205ENST00000602439 NISCHQ9Y2I1 1504 aa35.87■■■■□ 3.33
SFXN2-205ENST00000602439 CCDC180Q9P1Z9 1646 aa32.06■■■□□ 2.72
SFXN2-205ENST00000602439 ABCC9O60706 1549 aa31.53■■■□□ 2.64
SFXN2-205ENST00000602439 RB1CC1Q8TDY2 1594 aa30.31■■■□□ 2.44
SFXN2-205ENST00000602439 NACADO15069 1562 aa30.2■■■□□ 2.43
SFXN2-205ENST00000602439 DCAF8L2P0C7V8 631 aa30.13■■■□□ 2.41
SFXN2-205ENST00000602439 MYO15BQ96JP2 1530 aa29.94■■■□□ 2.38
SFXN2-205ENST00000602439 ZCCHC6Q5VYS8 1495 aaKnown RBP29.8■■■□□ 2.36
SFXN2-205ENST00000602439 DCAF1Q9Y4B6 1507 aa29.7■■■□□ 2.34
SFXN2-205ENST00000602439 UNC13AQ9UPW8 1703 aa29.55■■■□□ 2.32
SFXN2-205ENST00000602439 PABPN1Q86U42 306 aaKnown RBP eCLIP29.41■■■□□ 2.3
SFXN2-205ENST00000602439 BICRAQ9NZM4 1560 aa29.27■■■□□ 2.28
SFXN2-205ENST00000602439 SCRIBQ14160 1630 aa29.16■■■□□ 2.26
SFXN2-205ENST00000602439 SHROOM4Q9ULL8 1493 aa29.09■■■□□ 2.25
SFXN2-205ENST00000602439 DNAJC5BQ9UF47 199 aa29.08■■■□□ 2.25
SFXN2-205ENST00000602439 EIF4G1Q04637 1599 aaKnown RBP28.58■■■□□ 2.17
SFXN2-205ENST00000602439 CC2D2AQ9P2K1 1620 aa28.52■■■□□ 2.16
SFXN2-205ENST00000602439 CECR2Q9BXF3 1484 aa28.39■■■□□ 2.13
SFXN2-205ENST00000602439 SMARCA4P51532 1647 aa27.89■■■□□ 2.05
SFXN2-205ENST00000602439 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
SFXN2-205ENST00000602439 NCAPD3P42695 1498 aa27.83■■■□□ 2.05
SFXN2-205ENST00000602439 SMARCA2P51531 1590 aa27.82■■■□□ 2.04
SFXN2-205ENST00000602439 ATAD2BQ9ULI0 1458 aa27.78■■■□□ 2.04
SFXN2-205ENST00000602439 HMGXB3Q12766 1538 aa27.68■■■□□ 2.02
SFXN2-205ENST00000602439 PEG3Q9GZU2 1588 aa27.62■■■□□ 2.01
SFXN2-205ENST00000602439 BAZ1BQ9UIG0 1483 aaKnown RBP27.59■■■□□ 2.01
SFXN2-205ENST00000602439 MROH2BQ7Z745 1585 aa27.59■■■□□ 2.01
SFXN2-205ENST00000602439 WIZO95785 1651 aa27.3■■□□□ 1.96
SFXN2-205ENST00000602439 ERCC6Q03468 1493 aa27.28■■□□□ 1.96
SFXN2-205ENST00000602439 RSF1Q96T23 1441 aaPredicted RBP27.2■■□□□ 1.94
SFXN2-205ENST00000602439 LAMC3Q9Y6N6 1575 aa27.18■■□□□ 1.94
SFXN2-205ENST00000602439 NESP48681 1621 aa27.17■■□□□ 1.94
SFXN2-205ENST00000602439 CUX2O14529 1486 aa27.07■■□□□ 1.92
SFXN2-205ENST00000602439 TOP2AP11388 1531 aaKnown RBP27.03■■□□□ 1.92
SFXN2-205ENST00000602439 PDS5BQ9NTI5 1447 aa27.03■■□□□ 1.92
SFXN2-205ENST00000602439 CADPSQ9ULU8 1353 aa27.02■■□□□ 1.92
SFXN2-205ENST00000602439 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.9
SFXN2-205ENST00000602439 THOC2Q8NI27 1593 aaKnown RBP26.84■■□□□ 1.89
SFXN2-205ENST00000602439 CFTRP13569 1480 aa26.79■■□□□ 1.88
SFXN2-205ENST00000602439 CEP164Q9UPV0 1460 aa26.72■■□□□ 1.87
SFXN2-205ENST00000602439 MRC2Q9UBG0 1479 aa26.71■■□□□ 1.87
SFXN2-205ENST00000602439 FANCD2Q9BXW9 1451 aa26.7■■□□□ 1.87
SFXN2-205ENST00000602439 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
SFXN2-205ENST00000602439 PRDM2Q13029 1718 aa26.63■■□□□ 1.85
SFXN2-205ENST00000602439 WDR62O43379 1518 aa26.61■■□□□ 1.85
SFXN2-205ENST00000602439 DNAJC5Q9H3Z4 198 aa26.51■■□□□ 1.83
SFXN2-205ENST00000602439 URB2Q14146 1524 aaKnown RBP26.4■■□□□ 1.82
SFXN2-205ENST00000602439 SUPT5HO00267 1087 aaKnown RBP26.38■■□□□ 1.81
SFXN2-205ENST00000602439 ABCC8Q09428 1581 aa26.33■■□□□ 1.8
SFXN2-205ENST00000602439 TOPBP1Q92547 1522 aa26.24■■□□□ 1.79
SFXN2-205ENST00000602439 DNMBPQ6XZF7 1577 aa26.2■■□□□ 1.79
SFXN2-205ENST00000602439 IFT140Q96RY7 1462 aa26.17■■□□□ 1.78
SFXN2-205ENST00000602439 POLA1P09884 1462 aaPredicted RBP25.98■■□□□ 1.75
SFXN2-205ENST00000602439 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
SFXN2-205ENST00000602439 TARBP1Q13395 1621 aaKnown RBP25.95■■□□□ 1.74
SFXN2-205ENST00000602439 OSCARQ8IYS5 282 aa25.94■■□□□ 1.74
SFXN2-205ENST00000602439 SOGA1O94964 1423 aa25.92■■□□□ 1.74
SFXN2-205ENST00000602439 EIF4G3O43432 1585 aaKnown RBP25.91■■□□□ 1.74
SFXN2-205ENST00000602439 CUX1P39880 1505 aa25.9■■□□□ 1.74
SFXN2-205ENST00000602439 FGD5Q6ZNL6 1462 aa25.89■■□□□ 1.73
SFXN2-205ENST00000602439 RAD54L2Q9Y4B4 1467 aa25.85■■□□□ 1.73
SFXN2-205ENST00000602439 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
SFXN2-205ENST00000602439 AQRO60306 1485 aaKnown RBP eCLIP25.83■■□□□ 1.734e-7■■■■■ 31.4
SFXN2-205ENST00000602439 TDRD9Q8NDG6 1382 aaKnown RBP25.76■■□□□ 1.71
SFXN2-205ENST00000602439 WRNQ14191 1432 aaPredicted RBP eCLIP25.71■■□□□ 1.71
SFXN2-205ENST00000602439 TOP2BQ02880 1626 aa25.66■■□□□ 1.7
SFXN2-205ENST00000602439 BIVM-ERCC5R4GMW8 1640 aa25.66■■□□□ 1.7
SFXN2-205ENST00000602439 FBLN2P98095 1184 aa25.66■■□□□ 1.7
SFXN2-205ENST00000602439 CHD1O14646 1710 aa25.66■■□□□ 1.7
SFXN2-205ENST00000602439 GRIN2BQ13224 1484 aa25.65■■□□□ 1.7
SFXN2-205ENST00000602439 ABCA10Q8WWZ4 1543 aa25.64■■□□□ 1.7
SFXN2-205ENST00000602439 MAGI1Q96QZ7 1491 aaPredicted RBP25.62■■□□□ 1.69
SFXN2-205ENST00000602439 GAPVD1Q14C86 1478 aa25.61■■□□□ 1.69
SFXN2-205ENST00000602439 SNAPC4Q5SXM2 1469 aa25.6■■□□□ 1.69
SFXN2-205ENST00000602439 SYNJ1O43426 1573 aa25.59■■□□□ 1.69
SFXN2-205ENST00000602439 CHMP7Q8WUX9 453 aaPredicted RBP25.57■■□□□ 1.68
SFXN2-205ENST00000602439 PBRM1Q86U86 1689 aa25.57■■□□□ 1.68
SFXN2-205ENST00000602439 ABCA5Q8WWZ7 1642 aa25.54■■□□□ 1.68
SFXN2-205ENST00000602439 TRIM41Q8WV44 630 aa25.53■■□□□ 1.68
SFXN2-205ENST00000602439 SYNJ2O15056 1496 aa25.51■■□□□ 1.67
SFXN2-205ENST00000602439 RIMBP3CA6NJZ7 1639 aa25.47■■□□□ 1.67
SFXN2-205ENST00000602439 RIMBP3BA6NNM3 1639 aa25.47■■□□□ 1.67
SFXN2-205ENST00000602439 RIMBP3Q9UFD9 1639 aa25.47■■□□□ 1.67
SFXN2-205ENST00000602439 ARHGEF11O15085 1522 aa25.43■■□□□ 1.66
SFXN2-205ENST00000602439 ERICH3Q5RHP9 1530 aa25.37■■□□□ 1.65
SFXN2-205ENST00000602439 CLASP1Q7Z460 1538 aa25.34■■□□□ 1.65
SFXN2-205ENST00000602439 ADAMTS12P58397 1594 aa25.32■■□□□ 1.64
SFXN2-205ENST00000602439 FHAD1B1AJZ9 1412 aa25.32■■□□□ 1.64
SFXN2-205ENST00000602439 GRIN2AQ12879 1464 aa25.29■■□□□ 1.64
SFXN2-205ENST00000602439 CYB5RLQ6IPT4 315 aa25.25■■□□□ 1.63
SFXN2-205ENST00000602439 KIF27Q86VH2 1401 aa25.23■■□□□ 1.63
SFXN2-205ENST00000602439 ARAP1Q96P48 1450 aa25.19■■□□□ 1.62
SFXN2-205ENST00000602439 NUP160Q12769 1436 aa25.18■■□□□ 1.62
SFXN2-205ENST00000602439 CEP170Q5SW79 1584 aa25.14■■□□□ 1.62
SFXN2-205ENST00000602439 CUL7Q14999 1698 aa25.1■■□□□ 1.61
SFXN2-205ENST00000602439 IGF1RP08069 1367 aa25.09■■□□□ 1.61
SFXN2-205ENST00000602439 SHROOM2Q13796 1616 aa25.02■■□□□ 1.6
SFXN2-205ENST00000602439 CARMIL1Q5VZK9 1371 aa24.98■■□□□ 1.59
SFXN2-205ENST00000602439 JPH4Q96JJ6 628 aa24.97■■□□□ 1.59
SFXN2-205ENST00000602439 RUSC2Q8N2Y8 1516 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms