RNA–Protein interactions for RNA: ENST00000602260.5

ZNF544-219, Transcript of zinc finger protein 544, humanhuman

TSL 4

Gene ZNF544, Length 552 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544-219ENST00000602260 NISCHQ9Y2I1 1504 aa28.51■■■□□ 2.15
ZNF544-219ENST00000602260 CCDC180Q9P1Z9 1646 aa25.72■■□□□ 1.71
ZNF544-219ENST00000602260 ABCC9O60706 1549 aa25.55■■□□□ 1.68
ZNF544-219ENST00000602260 RB1CC1Q8TDY2 1594 aa24.44■■□□□ 1.5
ZNF544-219ENST00000602260 NACADO15069 1562 aa24.27■■□□□ 1.48
ZNF544-219ENST00000602260 MYO15BQ96JP2 1530 aa23.97■■□□□ 1.43
ZNF544-219ENST00000602260 DCAF8L2P0C7V8 631 aa23.89■■□□□ 1.41
ZNF544-219ENST00000602260 DNAJC5BQ9UF47 199 aa23.86■■□□□ 1.41
ZNF544-219ENST00000602260 UNC13AQ9UPW8 1703 aa23.86■■□□□ 1.41
ZNF544-219ENST00000602260 PABPN1Q86U42 306 aaKnown RBP eCLIP23.69■■□□□ 1.38
ZNF544-219ENST00000602260 ZCCHC6Q5VYS8 1495 aaKnown RBP23.66■■□□□ 1.38
ZNF544-219ENST00000602260 BICRAQ9NZM4 1560 aa23.65■■□□□ 1.38
ZNF544-219ENST00000602260 DCAF1Q9Y4B6 1507 aa23.64■■□□□ 1.38
ZNF544-219ENST00000602260 SHROOM4Q9ULL8 1493 aa23.51■■□□□ 1.35
ZNF544-219ENST00000602260 SCRIBQ14160 1630 aa23.3■■□□□ 1.32
ZNF544-219ENST00000602260 CC2D2AQ9P2K1 1620 aa23.15■■□□□ 1.3
ZNF544-219ENST00000602260 EIF4G1Q04637 1599 aaKnown RBP23.11■■□□□ 1.29
ZNF544-219ENST00000602260 CECR2Q9BXF3 1484 aa23.06■■□□□ 1.28
ZNF544-219ENST00000602260 NCAPD3P42695 1498 aa22.35■■□□□ 1.17
ZNF544-219ENST00000602260 SMARCA2P51531 1590 aa22.28■■□□□ 1.16
ZNF544-219ENST00000602260 SMARCA4P51532 1647 aa22.28■■□□□ 1.16
ZNF544-219ENST00000602260 ATAD2BQ9ULI0 1458 aa22.26■■□□□ 1.15
ZNF544-219ENST00000602260 HMGXB3Q12766 1538 aa22.26■■□□□ 1.15
ZNF544-219ENST00000602260 BAZ1AQ9NRL2 1556 aaPredicted RBP22.19■■□□□ 1.14
ZNF544-219ENST00000602260 CUX2O14529 1486 aa22.15■■□□□ 1.14
ZNF544-219ENST00000602260 ERCC6Q03468 1493 aa22.13■■□□□ 1.13
ZNF544-219ENST00000602260 PEG3Q9GZU2 1588 aa22.11■■□□□ 1.13
ZNF544-219ENST00000602260 BAZ1BQ9UIG0 1483 aaKnown RBP22.08■■□□□ 1.12
ZNF544-219ENST00000602260 DNAJC5Q9H3Z4 198 aa22.02■■□□□ 1.12
ZNF544-219ENST00000602260 NESP48681 1621 aa21.92■■□□□ 1.1
ZNF544-219ENST00000602260 MROH2BQ7Z745 1585 aa21.92■■□□□ 1.1
ZNF544-219ENST00000602260 LAMC3Q9Y6N6 1575 aa21.91■■□□□ 1.1
ZNF544-219ENST00000602260 THOC2Q8NI27 1593 aaKnown RBP21.82■■□□□ 1.08
ZNF544-219ENST00000602260 PDS5BQ9NTI5 1447 aa21.74■■□□□ 1.07
ZNF544-219ENST00000602260 KIF21AQ7Z4S6 1674 aa21.74■■□□□ 1.07
ZNF544-219ENST00000602260 WIZO95785 1651 aa21.66■■□□□ 1.06
ZNF544-219ENST00000602260 CADPSQ9ULU8 1353 aa21.64■■□□□ 1.06
ZNF544-219ENST00000602260 MRC2Q9UBG0 1479 aa21.56■■□□□ 1.04
ZNF544-219ENST00000602260 WDR62O43379 1518 aa21.53■■□□□ 1.04
ZNF544-219ENST00000602260 RSF1Q96T23 1441 aaPredicted RBP21.51■■□□□ 1.03
ZNF544-219ENST00000602260 CEP164Q9UPV0 1460 aa21.48■■□□□ 1.03
ZNF544-219ENST00000602260 TOP2AP11388 1531 aaKnown RBP21.47■■□□□ 1.03
ZNF544-219ENST00000602260 CFTRP13569 1480 aa21.42■■□□□ 1.02
ZNF544-219ENST00000602260 FANCD2Q9BXW9 1451 aa21.41■■□□□ 1.02
ZNF544-219ENST00000602260 PRDM2Q13029 1718 aa21.32■■□□□ 1
ZNF544-219ENST00000602260 URB2Q14146 1524 aaKnown RBP21.22■□□□□ 0.99
ZNF544-219ENST00000602260 CCDC88BA6NC98 1476 aa21.13■□□□□ 0.97
ZNF544-219ENST00000602260 IFT140Q96RY7 1462 aa21.05■□□□□ 0.96
ZNF544-219ENST00000602260 ABCC8Q09428 1581 aa21.04■□□□□ 0.96
ZNF544-219ENST00000602260 OSCARQ8IYS5 282 aa21.02■□□□□ 0.96
ZNF544-219ENST00000602260 TOPBP1Q92547 1522 aa21.01■□□□□ 0.95
ZNF544-219ENST00000602260 TRIM41Q8WV44 630 aa21■□□□□ 0.95
ZNF544-219ENST00000602260 DNMBPQ6XZF7 1577 aa20.97■□□□□ 0.95
ZNF544-219ENST00000602260 ZNF608Q9ULD9 1512 aaPredicted RBP20.93■□□□□ 0.94
ZNF544-219ENST00000602260 EIF4G3O43432 1585 aaKnown RBP20.91■□□□□ 0.94
ZNF544-219ENST00000602260 SUPT5HO00267 1087 aaKnown RBP20.85■□□□□ 0.93
ZNF544-219ENST00000602260 TARBP1Q13395 1621 aaKnown RBP20.85■□□□□ 0.93
ZNF544-219ENST00000602260 RIMBP3CA6NJZ7 1639 aa20.81■□□□□ 0.92
ZNF544-219ENST00000602260 RIMBP3BA6NNM3 1639 aa20.81■□□□□ 0.92
ZNF544-219ENST00000602260 RIMBP3Q9UFD9 1639 aa20.81■□□□□ 0.92
ZNF544-219ENST00000602260 POLA1P09884 1462 aaPredicted RBP20.79■□□□□ 0.92
ZNF544-219ENST00000602260 WDR97A6NE52 1622 aa20.75■□□□□ 0.91
ZNF544-219ENST00000602260 CHD1O14646 1710 aa20.75■□□□□ 0.91
ZNF544-219ENST00000602260 ARHGEF11O15085 1522 aa20.74■□□□□ 0.91
ZNF544-219ENST00000602260 AQRO60306 1485 aaKnown RBP eCLIP20.72■□□□□ 0.911e-7■■■■■ 32.3
ZNF544-219ENST00000602260 SOGA1O94964 1423 aa20.66■□□□□ 0.9
ZNF544-219ENST00000602260 FGD5Q6ZNL6 1462 aa20.65■□□□□ 0.9
ZNF544-219ENST00000602260 RAD54L2Q9Y4B4 1467 aa20.64■□□□□ 0.89
ZNF544-219ENST00000602260 CUX1P39880 1505 aa20.62■□□□□ 0.89
ZNF544-219ENST00000602260 MAGI1Q96QZ7 1491 aaPredicted RBP20.58■□□□□ 0.89
ZNF544-219ENST00000602260 SNAPC4Q5SXM2 1469 aa20.57■□□□□ 0.88
ZNF544-219ENST00000602260 TDRD9Q8NDG6 1382 aaKnown RBP20.57■□□□□ 0.88
ZNF544-219ENST00000602260 FBLN2P98095 1184 aa20.55■□□□□ 0.88
ZNF544-219ENST00000602260 GRIN2BQ13224 1484 aa20.54■□□□□ 0.88
ZNF544-219ENST00000602260 SYNJ1O43426 1573 aa20.53■□□□□ 0.88
ZNF544-219ENST00000602260 CLASP1Q7Z460 1538 aa20.52■□□□□ 0.87
ZNF544-219ENST00000602260 ARAP1Q96P48 1450 aa20.51■□□□□ 0.87
ZNF544-219ENST00000602260 PBRM1Q86U86 1689 aa20.5■□□□□ 0.87
ZNF544-219ENST00000602260 SYNJ2O15056 1496 aa20.49■□□□□ 0.87
ZNF544-219ENST00000602260 CYB5RLQ6IPT4 315 aa20.47■□□□□ 0.87
ZNF544-219ENST00000602260 ABCA10Q8WWZ4 1543 aa20.45■□□□□ 0.86
ZNF544-219ENST00000602260 CHMP7Q8WUX9 453 aaPredicted RBP20.45■□□□□ 0.86
ZNF544-219ENST00000602260 ABCA5Q8WWZ7 1642 aa20.45■□□□□ 0.86
ZNF544-219ENST00000602260 GAPVD1Q14C86 1478 aa20.44■□□□□ 0.86
ZNF544-219ENST00000602260 BIVM-ERCC5R4GMW8 1640 aa20.36■□□□□ 0.85
ZNF544-219ENST00000602260 WRNQ14191 1432 aaPredicted RBP eCLIP20.35■□□□□ 0.85
ZNF544-219ENST00000602260 TOP2BQ02880 1626 aa20.34■□□□□ 0.85
ZNF544-219ENST00000602260 ADAMTS12P58397 1594 aa20.29■□□□□ 0.84
ZNF544-219ENST00000602260 GRIN2AQ12879 1464 aa20.28■□□□□ 0.84
ZNF544-219ENST00000602260 TRHP20396 242 aaPredicted RBP20.27■□□□□ 0.84
ZNF544-219ENST00000602260 ERICH3Q5RHP9 1530 aa20.22■□□□□ 0.83
ZNF544-219ENST00000602260 NUP160Q12769 1436 aa20.2■□□□□ 0.82
ZNF544-219ENST00000602260 FHAD1B1AJZ9 1412 aa20.19■□□□□ 0.82
ZNF544-219ENST00000602260 CEP170Q5SW79 1584 aa20.19■□□□□ 0.82
ZNF544-219ENST00000602260 SHROOM2Q13796 1616 aa20.16■□□□□ 0.82
ZNF544-219ENST00000602260 ERCC6L2Q5T890 1561 aa20.09■□□□□ 0.81
ZNF544-219ENST00000602260 RUSC2Q8N2Y8 1516 aa20.02■□□□□ 0.79
ZNF544-219ENST00000602260 PRG4Q92954 1404 aaPredicted RBP19.97■□□□□ 0.79
ZNF544-219ENST00000602260 CUL7Q14999 1698 aa19.96■□□□□ 0.79
ZNF544-219ENST00000602260 KIF27Q86VH2 1401 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms