RNA–Protein interactions for RNA: ENST00000602223.5

STRN4-223, Transcript of striatin 4, humanhuman

TSL 4

Gene STRN4, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRN4-223ENST00000602223 NISCHQ9Y2I1 1504 aa30.68■■■□□ 2.5
STRN4-223ENST00000602223 CCDC180Q9P1Z9 1646 aa27.45■■□□□ 1.99
STRN4-223ENST00000602223 ABCC9O60706 1549 aa27■■□□□ 1.91
STRN4-223ENST00000602223 RB1CC1Q8TDY2 1594 aa25.91■■□□□ 1.74
STRN4-223ENST00000602223 NACADO15069 1562 aa25.82■■□□□ 1.72
STRN4-223ENST00000602223 DCAF8L2P0C7V8 631 aa25.62■■□□□ 1.69
STRN4-223ENST00000602223 MYO15BQ96JP2 1530 aa25.6■■□□□ 1.69
STRN4-223ENST00000602223 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
STRN4-223ENST00000602223 UNC13AQ9UPW8 1703 aa25.43■■□□□ 1.66
STRN4-223ENST00000602223 DCAF1Q9Y4B6 1507 aa25.39■■□□□ 1.66
STRN4-223ENST00000602223 BICRAQ9NZM4 1560 aa25.15■■□□□ 1.62
STRN4-223ENST00000602223 PABPN1Q86U42 306 aaKnown RBP eCLIP25.15■■□□□ 1.62
STRN4-223ENST00000602223 DNAJC5BQ9UF47 199 aa25■■□□□ 1.59
STRN4-223ENST00000602223 SCRIBQ14160 1630 aa24.97■■□□□ 1.59
STRN4-223ENST00000602223 SHROOM4Q9ULL8 1493 aa24.85■■□□□ 1.57
STRN4-223ENST00000602223 EIF4G1Q04637 1599 aaKnown RBP24.5■■□□□ 1.51
STRN4-223ENST00000602223 CC2D2AQ9P2K1 1620 aa24.46■■□□□ 1.51
STRN4-223ENST00000602223 CECR2Q9BXF3 1484 aa24.3■■□□□ 1.48
STRN4-223ENST00000602223 SMARCA4P51532 1647 aa23.88■■□□□ 1.41
STRN4-223ENST00000602223 NCAPD3P42695 1498 aa23.81■■□□□ 1.4
STRN4-223ENST00000602223 BAZ1AQ9NRL2 1556 aaPredicted RBP23.8■■□□□ 1.4
STRN4-223ENST00000602223 ATAD2BQ9ULI0 1458 aa23.78■■□□□ 1.4
STRN4-223ENST00000602223 SMARCA2P51531 1590 aa23.75■■□□□ 1.39
STRN4-223ENST00000602223 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
STRN4-223ENST00000602223 PEG3Q9GZU2 1588 aa23.67■■□□□ 1.38
STRN4-223ENST00000602223 MROH2BQ7Z745 1585 aa23.64■■□□□ 1.37
STRN4-223ENST00000602223 BAZ1BQ9UIG0 1483 aaKnown RBP23.56■■□□□ 1.36
STRN4-223ENST00000602223 WIZO95785 1651 aa23.41■■□□□ 1.34
STRN4-223ENST00000602223 NESP48681 1621 aa23.31■■□□□ 1.32
STRN4-223ENST00000602223 ERCC6Q03468 1493 aa23.28■■□□□ 1.32
STRN4-223ENST00000602223 RSF1Q96T23 1441 aaPredicted RBP23.25■■□□□ 1.31
STRN4-223ENST00000602223 LAMC3Q9Y6N6 1575 aa23.25■■□□□ 1.31
STRN4-223ENST00000602223 CUX2O14529 1486 aa23.17■■□□□ 1.3
STRN4-223ENST00000602223 TOP2AP11388 1531 aaKnown RBP23.13■■□□□ 1.29
STRN4-223ENST00000602223 KIF21AQ7Z4S6 1674 aa23.1■■□□□ 1.29
STRN4-223ENST00000602223 CADPSQ9ULU8 1353 aa23.08■■□□□ 1.29
STRN4-223ENST00000602223 THOC2Q8NI27 1593 aaKnown RBP23.06■■□□□ 1.28
STRN4-223ENST00000602223 PDS5BQ9NTI5 1447 aa23.05■■□□□ 1.28
STRN4-223ENST00000602223 CFTRP13569 1480 aa22.91■■□□□ 1.26
STRN4-223ENST00000602223 PRDM2Q13029 1718 aa22.85■■□□□ 1.25
STRN4-223ENST00000602223 MRC2Q9UBG0 1479 aa22.85■■□□□ 1.25
STRN4-223ENST00000602223 FANCD2Q9BXW9 1451 aa22.83■■□□□ 1.25
STRN4-223ENST00000602223 CEP164Q9UPV0 1460 aa22.83■■□□□ 1.25
STRN4-223ENST00000602223 CCDC88BA6NC98 1476 aa22.82■■□□□ 1.24
STRN4-223ENST00000602223 WDR62O43379 1518 aa22.81■■□□□ 1.24
STRN4-223ENST00000602223 DNAJC5Q9H3Z4 198 aa22.7■■□□□ 1.22
STRN4-223ENST00000602223 URB2Q14146 1524 aaKnown RBP22.62■■□□□ 1.21
STRN4-223ENST00000602223 TOPBP1Q92547 1522 aa22.45■■□□□ 1.18
STRN4-223ENST00000602223 ABCC8Q09428 1581 aa22.43■■□□□ 1.18
STRN4-223ENST00000602223 SUPT5HO00267 1087 aaKnown RBP22.42■■□□□ 1.18
STRN4-223ENST00000602223 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
STRN4-223ENST00000602223 IFT140Q96RY7 1462 aa22.36■■□□□ 1.17
STRN4-223ENST00000602223 ZNF608Q9ULD9 1512 aaPredicted RBP22.27■■□□□ 1.16
STRN4-223ENST00000602223 TARBP1Q13395 1621 aaKnown RBP22.25■■□□□ 1.15
STRN4-223ENST00000602223 POLA1P09884 1462 aaPredicted RBP22.24■■□□□ 1.15
STRN4-223ENST00000602223 EIF4G3O43432 1585 aaKnown RBP22.22■■□□□ 1.15
STRN4-223ENST00000602223 CUX1P39880 1505 aa22.19■■□□□ 1.14
STRN4-223ENST00000602223 FGD5Q6ZNL6 1462 aa22.15■■□□□ 1.14
STRN4-223ENST00000602223 RAD54L2Q9Y4B4 1467 aa22.13■■□□□ 1.13
STRN4-223ENST00000602223 SOGA1O94964 1423 aa22.12■■□□□ 1.13
STRN4-223ENST00000602223 AQRO60306 1485 aaKnown RBP eCLIP22.1■■□□□ 1.133e-19■■■■■ 44.2
STRN4-223ENST00000602223 OSCARQ8IYS5 282 aa22.1■■□□□ 1.13
STRN4-223ENST00000602223 WDR97A6NE52 1622 aa22.08■■□□□ 1.13
STRN4-223ENST00000602223 CHD1O14646 1710 aa22.03■■□□□ 1.12
STRN4-223ENST00000602223 TDRD9Q8NDG6 1382 aaKnown RBP22■■□□□ 1.11
STRN4-223ENST00000602223 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
STRN4-223ENST00000602223 TOP2BQ02880 1626 aa21.95■■□□□ 1.1
STRN4-223ENST00000602223 SYNJ1O43426 1573 aa21.93■■□□□ 1.1
STRN4-223ENST00000602223 WRNQ14191 1432 aaPredicted RBP eCLIP21.93■■□□□ 1.1
STRN4-223ENST00000602223 ABCA10Q8WWZ4 1543 aa21.93■■□□□ 1.1
STRN4-223ENST00000602223 PBRM1Q86U86 1689 aa21.92■■□□□ 1.1
STRN4-223ENST00000602223 SNAPC4Q5SXM2 1469 aa21.91■■□□□ 1.1
STRN4-223ENST00000602223 GRIN2BQ13224 1484 aa21.9■■□□□ 1.1
STRN4-223ENST00000602223 ABCA5Q8WWZ7 1642 aa21.9■■□□□ 1.1
STRN4-223ENST00000602223 MAGI1Q96QZ7 1491 aaPredicted RBP21.89■■□□□ 1.09
STRN4-223ENST00000602223 GAPVD1Q14C86 1478 aa21.87■■□□□ 1.09
STRN4-223ENST00000602223 RIMBP3CA6NJZ7 1639 aa21.86■■□□□ 1.09
STRN4-223ENST00000602223 RIMBP3BA6NNM3 1639 aa21.86■■□□□ 1.09
STRN4-223ENST00000602223 RIMBP3Q9UFD9 1639 aa21.86■■□□□ 1.09
STRN4-223ENST00000602223 FBLN2P98095 1184 aa21.83■■□□□ 1.09
STRN4-223ENST00000602223 TRIM41Q8WV44 630 aa21.81■■□□□ 1.08
STRN4-223ENST00000602223 SYNJ2O15056 1496 aa21.8■■□□□ 1.08
STRN4-223ENST00000602223 ARHGEF11O15085 1522 aa21.8■■□□□ 1.08
STRN4-223ENST00000602223 CHMP7Q8WUX9 453 aaPredicted RBP21.76■■□□□ 1.07
STRN4-223ENST00000602223 CLASP1Q7Z460 1538 aa21.75■■□□□ 1.07
STRN4-223ENST00000602223 ADAMTS12P58397 1594 aa21.7■■□□□ 1.06
STRN4-223ENST00000602223 ERICH3Q5RHP9 1530 aa21.67■■□□□ 1.06
STRN4-223ENST00000602223 GRIN2AQ12879 1464 aa21.63■■□□□ 1.05
STRN4-223ENST00000602223 ARAP1Q96P48 1450 aa21.61■■□□□ 1.05
STRN4-223ENST00000602223 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
STRN4-223ENST00000602223 CEP170Q5SW79 1584 aa21.56■■□□□ 1.04
STRN4-223ENST00000602223 CYB5RLQ6IPT4 315 aa21.55■■□□□ 1.04
STRN4-223ENST00000602223 NUP160Q12769 1436 aa21.55■■□□□ 1.04
STRN4-223ENST00000602223 KIF27Q86VH2 1401 aa21.48■■□□□ 1.03
STRN4-223ENST00000602223 SHROOM2Q13796 1616 aa21.46■■□□□ 1.03
STRN4-223ENST00000602223 CUL7Q14999 1698 aa21.45■■□□□ 1.02
STRN4-223ENST00000602223 IGF1RP08069 1367 aa21.43■■□□□ 1.02
STRN4-223ENST00000602223 ERCC6L2Q5T890 1561 aa21.41■■□□□ 1.02
STRN4-223ENST00000602223 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.01
STRN4-223ENST00000602223 CARMIL1Q5VZK9 1371 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 214.5 ms