RNA–Protein interactions for RNA: ENST00000602222.5

SMG9-213, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 650 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-213ENST00000602222 NISCHQ9Y2I1 1504 aa37.85■■■■□ 3.65
SMG9-213ENST00000602222 CCDC180Q9P1Z9 1646 aa33.86■■■■□ 3.01
SMG9-213ENST00000602222 ABCC9O60706 1549 aa33.74■■■□□ 2.99
SMG9-213ENST00000602222 RB1CC1Q8TDY2 1594 aa32.19■■■□□ 2.74
SMG9-213ENST00000602222 NACADO15069 1562 aa32.04■■■□□ 2.72
SMG9-213ENST00000602222 DCAF8L2P0C7V8 631 aa31.84■■■□□ 2.69
SMG9-213ENST00000602222 MYO15BQ96JP2 1530 aa31.7■■■□□ 2.67
SMG9-213ENST00000602222 DNAJC5BQ9UF47 199 aa31.63■■■□□ 2.65
SMG9-213ENST00000602222 PABPN1Q86U42 306 aaKnown RBP eCLIP31.47■■■□□ 2.63
SMG9-213ENST00000602222 ZCCHC6Q5VYS8 1495 aaKnown RBP31.38■■■□□ 2.61
SMG9-213ENST00000602222 UNC13AQ9UPW8 1703 aa31.37■■■□□ 2.61
SMG9-213ENST00000602222 DCAF1Q9Y4B6 1507 aa31.32■■■□□ 2.6
SMG9-213ENST00000602222 BICRAQ9NZM4 1560 aa31.26■■■□□ 2.6
SMG9-213ENST00000602222 SHROOM4Q9ULL8 1493 aa30.93■■■□□ 2.54
SMG9-213ENST00000602222 SCRIBQ14160 1630 aa30.8■■■□□ 2.52
SMG9-213ENST00000602222 CC2D2AQ9P2K1 1620 aa30.48■■■□□ 2.47
SMG9-213ENST00000602222 EIF4G1Q04637 1599 aaKnown RBP30.47■■■□□ 2.47
SMG9-213ENST00000602222 CECR2Q9BXF3 1484 aa30.43■■■□□ 2.46
SMG9-213ENST00000602222 NCAPD3P42695 1498 aa29.62■■■□□ 2.33
SMG9-213ENST00000602222 ATAD2BQ9ULI0 1458 aa29.51■■■□□ 2.31
SMG9-213ENST00000602222 SMARCA4P51532 1647 aa29.45■■■□□ 2.31
SMG9-213ENST00000602222 SMARCA2P51531 1590 aa29.42■■■□□ 2.3
SMG9-213ENST00000602222 HMGXB3Q12766 1538 aa29.36■■■□□ 2.29
SMG9-213ENST00000602222 BAZ1AQ9NRL2 1556 aaPredicted RBP29.35■■■□□ 2.29
SMG9-213ENST00000602222 PEG3Q9GZU2 1588 aa29.22■■■□□ 2.27
SMG9-213ENST00000602222 BAZ1BQ9UIG0 1483 aaKnown RBP29.19■■■□□ 2.26
SMG9-213ENST00000602222 MROH2BQ7Z745 1585 aa29.13■■■□□ 2.25
SMG9-213ENST00000602222 ERCC6Q03468 1493 aa29.13■■■□□ 2.25
SMG9-213ENST00000602222 CUX2O14529 1486 aa29.1■■■□□ 2.25
SMG9-213ENST00000602222 NESP48681 1621 aa29.02■■■□□ 2.24
SMG9-213ENST00000602222 DNAJC5Q9H3Z4 198 aa29■■■□□ 2.23
SMG9-213ENST00000602222 LAMC3Q9Y6N6 1575 aa28.87■■■□□ 2.21
SMG9-213ENST00000602222 WIZO95785 1651 aa28.74■■■□□ 2.19
SMG9-213ENST00000602222 PDS5BQ9NTI5 1447 aa28.74■■■□□ 2.19
SMG9-213ENST00000602222 CADPSQ9ULU8 1353 aa28.72■■■□□ 2.19
SMG9-213ENST00000602222 THOC2Q8NI27 1593 aaKnown RBP28.69■■■□□ 2.18
SMG9-213ENST00000602222 RSF1Q96T23 1441 aaPredicted RBP28.61■■■□□ 2.17
SMG9-213ENST00000602222 KIF21AQ7Z4S6 1674 aa28.58■■■□□ 2.17
SMG9-213ENST00000602222 MRC2Q9UBG0 1479 aa28.45■■■□□ 2.14
SMG9-213ENST00000602222 TOP2AP11388 1531 aaKnown RBP28.43■■■□□ 2.14
SMG9-213ENST00000602222 CFTRP13569 1480 aa28.4■■■□□ 2.14
SMG9-213ENST00000602222 WDR62O43379 1518 aa28.38■■■□□ 2.13
SMG9-213ENST00000602222 CEP164Q9UPV0 1460 aa28.34■■■□□ 2.13
SMG9-213ENST00000602222 FANCD2Q9BXW9 1451 aa28.34■■■□□ 2.13
SMG9-213ENST00000602222 CCDC88BA6NC98 1476 aa28.14■■■□□ 2.09
SMG9-213ENST00000602222 URB2Q14146 1524 aaKnown RBP28.09■■■□□ 2.09
SMG9-213ENST00000602222 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
SMG9-213ENST00000602222 OSCARQ8IYS5 282 aa27.82■■■□□ 2.04
SMG9-213ENST00000602222 TOPBP1Q92547 1522 aa27.82■■■□□ 2.04
SMG9-213ENST00000602222 IFT140Q96RY7 1462 aa27.81■■■□□ 2.04
SMG9-213ENST00000602222 ABCC8Q09428 1581 aa27.81■■■□□ 2.04
SMG9-213ENST00000602222 ZNF608Q9ULD9 1512 aaPredicted RBP27.72■■■□□ 2.03
SMG9-213ENST00000602222 DNMBPQ6XZF7 1577 aa27.71■■■□□ 2.03
SMG9-213ENST00000602222 TRIM41Q8WV44 630 aa27.66■■■□□ 2.02
SMG9-213ENST00000602222 POLA1P09884 1462 aaPredicted RBP27.54■■■□□ 2
SMG9-213ENST00000602222 TARBP1Q13395 1621 aaKnown RBP27.54■■■□□ 2
SMG9-213ENST00000602222 EIF4G3O43432 1585 aaKnown RBP27.52■■■□□ 2
SMG9-213ENST00000602222 AQRO60306 1485 aaKnown RBP eCLIP27.5■■□□□ 1.99
SMG9-213ENST00000602222 SOGA1O94964 1423 aa27.44■■□□□ 1.98
SMG9-213ENST00000602222 RAD54L2Q9Y4B4 1467 aa27.42■■□□□ 1.98
SMG9-213ENST00000602222 SUPT5HO00267 1087 aaKnown RBP27.37■■□□□ 1.97
SMG9-213ENST00000602222 FGD5Q6ZNL6 1462 aa27.37■■□□□ 1.97
SMG9-213ENST00000602222 CUX1P39880 1505 aa27.36■■□□□ 1.97
SMG9-213ENST00000602222 TDRD9Q8NDG6 1382 aaKnown RBP27.35■■□□□ 1.97
SMG9-213ENST00000602222 RIMBP3CA6NJZ7 1639 aa27.34■■□□□ 1.97
SMG9-213ENST00000602222 RIMBP3BA6NNM3 1639 aa27.34■■□□□ 1.97
SMG9-213ENST00000602222 RIMBP3Q9UFD9 1639 aa27.34■■□□□ 1.97
SMG9-213ENST00000602222 ARHGEF11O15085 1522 aa27.31■■□□□ 1.96
SMG9-213ENST00000602222 WDR97A6NE52 1622 aa27.3■■□□□ 1.96
SMG9-213ENST00000602222 FBLN2P98095 1184 aa27.27■■□□□ 1.96
SMG9-213ENST00000602222 CHD1O14646 1710 aa27.26■■□□□ 1.95
SMG9-213ENST00000602222 SNAPC4Q5SXM2 1469 aa27.2■■□□□ 1.95
SMG9-213ENST00000602222 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
SMG9-213ENST00000602222 MAGI1Q96QZ7 1491 aaPredicted RBP27.18■■□□□ 1.94
SMG9-213ENST00000602222 CHMP7Q8WUX9 453 aaPredicted RBP27.14■■□□□ 1.94
SMG9-213ENST00000602222 CYB5RLQ6IPT4 315 aa27.12■■□□□ 1.93
SMG9-213ENST00000602222 ABCA10Q8WWZ4 1543 aa27.11■■□□□ 1.93
SMG9-213ENST00000602222 GAPVD1Q14C86 1478 aa27.1■■□□□ 1.93
SMG9-213ENST00000602222 SYNJ2O15056 1496 aa27.08■■□□□ 1.93
SMG9-213ENST00000602222 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
SMG9-213ENST00000602222 CLASP1Q7Z460 1538 aa27.04■■□□□ 1.92
SMG9-213ENST00000602222 SYNJ1O43426 1573 aa27.02■■□□□ 1.92
SMG9-213ENST00000602222 WRNQ14191 1432 aaPredicted RBP eCLIP27.02■■□□□ 1.92
SMG9-213ENST00000602222 ABCA5Q8WWZ7 1642 aa27■■□□□ 1.91
SMG9-213ENST00000602222 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
SMG9-213ENST00000602222 TOP2BQ02880 1626 aa26.96■■□□□ 1.91
SMG9-213ENST00000602222 BIVM-ERCC5R4GMW8 1640 aa26.94■■□□□ 1.9
SMG9-213ENST00000602222 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
SMG9-213ENST00000602222 FHAD1B1AJZ9 1412 aa26.78■■□□□ 1.88
SMG9-213ENST00000602222 ADAMTS12P58397 1594 aa26.78■■□□□ 1.88
SMG9-213ENST00000602222 NUP160Q12769 1436 aa26.76■■□□□ 1.87
SMG9-213ENST00000602222 ERICH3Q5RHP9 1530 aa26.75■■□□□ 1.87
SMG9-213ENST00000602222 TRHP20396 242 aaPredicted RBP26.74■■□□□ 1.87
SMG9-213ENST00000602222 CEP170Q5SW79 1584 aa26.67■■□□□ 1.86
SMG9-213ENST00000602222 ERCC6L2Q5T890 1561 aa26.59■■□□□ 1.85
SMG9-213ENST00000602222 SHROOM2Q13796 1616 aa26.57■■□□□ 1.84
SMG9-213ENST00000602222 JPH4Q96JJ6 628 aa26.51■■□□□ 1.83
SMG9-213ENST00000602222 IGF1RP08069 1367 aa26.49■■□□□ 1.83
SMG9-213ENST00000602222 KIF27Q86VH2 1401 aa26.48■■□□□ 1.83
SMG9-213ENST00000602222 PRG4Q92954 1404 aaPredicted RBP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms