RNA–Protein interactions for RNA: ENST00000602216.1

RPL18A-207, Transcript of ribosomal protein L18a, humanhuman

TSL 2

Gene RPL18A, Length 907 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL18A-207ENST00000602216 NISCHQ9Y2I1 1504 aa41.33■■■■■ 4.21
RPL18A-207ENST00000602216 CCDC180Q9P1Z9 1646 aa36.62■■■■□ 3.45
RPL18A-207ENST00000602216 ABCC9O60706 1549 aa36.2■■■■□ 3.39
RPL18A-207ENST00000602216 ZCCHC6Q5VYS8 1495 aaKnown RBP34.51■■■■□ 3.11
RPL18A-207ENST00000602216 NACADO15069 1562 aa34.32■■■■□ 3.09
RPL18A-207ENST00000602216 MYO15BQ96JP2 1530 aa34.27■■■■□ 3.08
RPL18A-207ENST00000602216 RB1CC1Q8TDY2 1594 aa34.26■■■■□ 3.07
RPL18A-207ENST00000602216 DNAJC5BQ9UF47 199 aa34.25■■■■□ 3.07
RPL18A-207ENST00000602216 DCAF1Q9Y4B6 1507 aa34.25■■■■□ 3.07
RPL18A-207ENST00000602216 DCAF8L2P0C7V8 631 aa34.24■■■■□ 3.07
RPL18A-207ENST00000602216 PABPN1Q86U42 306 aaKnown RBP eCLIP33.66■■■□□ 2.98
RPL18A-207ENST00000602216 UNC13AQ9UPW8 1703 aa33.58■■■□□ 2.97
RPL18A-207ENST00000602216 SCRIBQ14160 1630 aa33.39■■■□□ 2.93
RPL18A-207ENST00000602216 BICRAQ9NZM4 1560 aa33.28■■■□□ 2.92
RPL18A-207ENST00000602216 SHROOM4Q9ULL8 1493 aa32.93■■■□□ 2.86
RPL18A-207ENST00000602216 CECR2Q9BXF3 1484 aa32.64■■■□□ 2.82
RPL18A-207ENST00000602216 CC2D2AQ9P2K1 1620 aa32.64■■■□□ 2.82
RPL18A-207ENST00000602216 EIF4G1Q04637 1599 aaKnown RBP32.45■■■□□ 2.79
RPL18A-207ENST00000602216 SMARCA4P51532 1647 aa32■■■□□ 2.71
RPL18A-207ENST00000602216 BAZ1AQ9NRL2 1556 aaPredicted RBP31.99■■■□□ 2.71
RPL18A-207ENST00000602216 MROH2BQ7Z745 1585 aa31.85■■■□□ 2.69
RPL18A-207ENST00000602216 DNAJC5Q9H3Z4 198 aa31.82■■■□□ 2.68
RPL18A-207ENST00000602216 ATAD2BQ9ULI0 1458 aa31.74■■■□□ 2.67
RPL18A-207ENST00000602216 PEG3Q9GZU2 1588 aa31.73■■■□□ 2.67
RPL18A-207ENST00000602216 SMARCA2P51531 1590 aa31.69■■■□□ 2.66
RPL18A-207ENST00000602216 NCAPD3P42695 1498 aa31.68■■■□□ 2.66
RPL18A-207ENST00000602216 RSF1Q96T23 1441 aaPredicted RBP31.6■■■□□ 2.65
RPL18A-207ENST00000602216 HMGXB3Q12766 1538 aa31.55■■■□□ 2.64
RPL18A-207ENST00000602216 WIZO95785 1651 aa31.54■■■□□ 2.64
RPL18A-207ENST00000602216 BAZ1BQ9UIG0 1483 aaKnown RBP31.46■■■□□ 2.63
RPL18A-207ENST00000602216 ERCC6Q03468 1493 aa31.35■■■□□ 2.61
RPL18A-207ENST00000602216 CUX2O14529 1486 aa31.33■■■□□ 2.61
RPL18A-207ENST00000602216 TOP2AP11388 1531 aaKnown RBP31.2■■■□□ 2.59
RPL18A-207ENST00000602216 SUPT5HO00267 1087 aaKnown RBP30.94■■■□□ 2.54
RPL18A-207ENST00000602216 NESP48681 1621 aa30.93■■■□□ 2.54
RPL18A-207ENST00000602216 CCDC88BA6NC98 1476 aa30.84■■■□□ 2.53
RPL18A-207ENST00000602216 LAMC3Q9Y6N6 1575 aa30.78■■■□□ 2.52
RPL18A-207ENST00000602216 CADPSQ9ULU8 1353 aa30.75■■■□□ 2.51
RPL18A-207ENST00000602216 THOC2Q8NI27 1593 aaKnown RBP30.66■■■□□ 2.5
RPL18A-207ENST00000602216 CFTRP13569 1480 aa30.66■■■□□ 2.5
RPL18A-207ENST00000602216 PDS5BQ9NTI5 1447 aa30.54■■■□□ 2.48
RPL18A-207ENST00000602216 KIF21AQ7Z4S6 1674 aa30.53■■■□□ 2.48
RPL18A-207ENST00000602216 PRDM2Q13029 1718 aa30.49■■■□□ 2.47
RPL18A-207ENST00000602216 TRIM41Q8WV44 630 aa30.39■■■□□ 2.46
RPL18A-207ENST00000602216 FANCD2Q9BXW9 1451 aa30.38■■■□□ 2.45
RPL18A-207ENST00000602216 CEP164Q9UPV0 1460 aa30.31■■■□□ 2.44
RPL18A-207ENST00000602216 MRC2Q9UBG0 1479 aa30.26■■■□□ 2.44
RPL18A-207ENST00000602216 WDR62O43379 1518 aa30.17■■■□□ 2.42
RPL18A-207ENST00000602216 URB2Q14146 1524 aaKnown RBP30.09■■■□□ 2.41
RPL18A-207ENST00000602216 TOPBP1Q92547 1522 aa29.96■■■□□ 2.39
RPL18A-207ENST00000602216 ABCC8Q09428 1581 aa29.95■■■□□ 2.39
RPL18A-207ENST00000602216 DNMBPQ6XZF7 1577 aa29.95■■■□□ 2.39
RPL18A-207ENST00000602216 OSCARQ8IYS5 282 aa29.91■■■□□ 2.38
RPL18A-207ENST00000602216 CUX1P39880 1505 aa29.86■■■□□ 2.37
RPL18A-207ENST00000602216 WRNQ14191 1432 aaPredicted RBP eCLIP29.75■■■□□ 2.355e-6■■□□□ 12.5
RPL18A-207ENST00000602216 POLA1P09884 1462 aaPredicted RBP29.73■■■□□ 2.35
RPL18A-207ENST00000602216 SYNJ1O43426 1573 aa29.71■■■□□ 2.35
RPL18A-207ENST00000602216 BIVM-ERCC5R4GMW8 1640 aa29.71■■■□□ 2.35
RPL18A-207ENST00000602216 TOP2BQ02880 1626 aa29.7■■■□□ 2.34
RPL18A-207ENST00000602216 FGD5Q6ZNL6 1462 aa29.68■■■□□ 2.34
RPL18A-207ENST00000602216 IFT140Q96RY7 1462 aa29.67■■■□□ 2.34
RPL18A-207ENST00000602216 TARBP1Q13395 1621 aaKnown RBP29.64■■■□□ 2.34
RPL18A-207ENST00000602216 RAD54L2Q9Y4B4 1467 aa29.58■■■□□ 2.33
RPL18A-207ENST00000602216 SOGA1O94964 1423 aa29.57■■■□□ 2.32
RPL18A-207ENST00000602216 ZNF608Q9ULD9 1512 aaPredicted RBP29.52■■■□□ 2.32
RPL18A-207ENST00000602216 RIMBP3CA6NJZ7 1639 aa29.5■■■□□ 2.31
RPL18A-207ENST00000602216 RIMBP3BA6NNM3 1639 aa29.5■■■□□ 2.31
RPL18A-207ENST00000602216 RIMBP3Q9UFD9 1639 aa29.5■■■□□ 2.31
RPL18A-207ENST00000602216 WDR97A6NE52 1622 aa29.49■■■□□ 2.31
RPL18A-207ENST00000602216 ABCA10Q8WWZ4 1543 aa29.44■■■□□ 2.3
RPL18A-207ENST00000602216 EIF4G3O43432 1585 aaKnown RBP29.43■■■□□ 2.3
RPL18A-207ENST00000602216 AQRO60306 1485 aaKnown RBP eCLIP29.38■■■□□ 2.291e-11■■■■■ 44.6
RPL18A-207ENST00000602216 TDRD9Q8NDG6 1382 aaKnown RBP29.37■■■□□ 2.29
RPL18A-207ENST00000602216 ARHGEF11O15085 1522 aa29.36■■■□□ 2.29
RPL18A-207ENST00000602216 ABCA5Q8WWZ7 1642 aa29.31■■■□□ 2.28
RPL18A-207ENST00000602216 CYB5RLQ6IPT4 315 aa29.27■■■□□ 2.28
RPL18A-207ENST00000602216 GAPVD1Q14C86 1478 aa29.25■■■□□ 2.27
RPL18A-207ENST00000602216 PBRM1Q86U86 1689 aa29.21■■■□□ 2.27
RPL18A-207ENST00000602216 FBLN2P98095 1184 aa29.2■■■□□ 2.26
RPL18A-207ENST00000602216 GRIN2BQ13224 1484 aa29.2■■■□□ 2.26
RPL18A-207ENST00000602216 TRHP20396 242 aaPredicted RBP29.17■■■□□ 2.26
RPL18A-207ENST00000602216 CHD1O14646 1710 aa29.16■■■□□ 2.26
RPL18A-207ENST00000602216 CHIC1Q5VXU3 224 aa29.14■■■□□ 2.26
RPL18A-207ENST00000602216 SNAPC4Q5SXM2 1469 aa29.11■■■□□ 2.25
RPL18A-207ENST00000602216 KIF27Q86VH2 1401 aa29.1■■■□□ 2.25
RPL18A-207ENST00000602216 MAGI1Q96QZ7 1491 aaPredicted RBP29.1■■■□□ 2.25
RPL18A-207ENST00000602216 ERICH3Q5RHP9 1530 aa29.09■■■□□ 2.25
RPL18A-207ENST00000602216 ARAP1Q96P48 1450 aa29.02■■■□□ 2.24
RPL18A-207ENST00000602216 ADAMTS12P58397 1594 aa28.99■■■□□ 2.23
RPL18A-207ENST00000602216 SYNJ2O15056 1496 aa28.98■■■□□ 2.23
RPL18A-207ENST00000602216 RUSC2Q8N2Y8 1516 aa28.98■■■□□ 2.23
RPL18A-207ENST00000602216 IGF1RP08069 1367 aa28.98■■■□□ 2.23
RPL18A-207ENST00000602216 FHAD1B1AJZ9 1412 aa28.93■■■□□ 2.22
RPL18A-207ENST00000602216 CHMP7Q8WUX9 453 aaPredicted RBP28.88■■■□□ 2.21
RPL18A-207ENST00000602216 CUL7Q14999 1698 aa28.88■■■□□ 2.21
RPL18A-207ENST00000602216 GRIN2AQ12879 1464 aa28.84■■■□□ 2.21
RPL18A-207ENST00000602216 CARMIL1Q5VZK9 1371 aa28.78■■■□□ 2.2
RPL18A-207ENST00000602216 EEA1Q15075 1411 aa28.77■■■□□ 2.2
RPL18A-207ENST00000602216 CLASP1Q7Z460 1538 aa28.75■■■□□ 2.19
RPL18A-207ENST00000602216 NUP160Q12769 1436 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms