RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 NISCHQ9Y2I1 1504 aa45.87■■■■■ 4.93
SIN3B-212ENST00000602204 CCDC180Q9P1Z9 1646 aa40.42■■■■■ 4.06
SIN3B-212ENST00000602204 ZCCHC6Q5VYS8 1495 aaKnown RBP38.48■■■■□ 3.75
SIN3B-212ENST00000602204 ABCC9O60706 1549 aa38.16■■■■□ 3.7
SIN3B-212ENST00000602204 DCAF1Q9Y4B6 1507 aa38.1■■■■□ 3.69
SIN3B-212ENST00000602204 MYO15BQ96JP2 1530 aa37.83■■■■□ 3.65
SIN3B-212ENST00000602204 NACADO15069 1562 aa37.63■■■■□ 3.62
SIN3B-212ENST00000602204 DCAF8L2P0C7V8 631 aa37.58■■■■□ 3.61
SIN3B-212ENST00000602204 RB1CC1Q8TDY2 1594 aa37.38■■■■□ 3.57
SIN3B-212ENST00000602204 SCRIBQ14160 1630 aa36.81■■■■□ 3.48
SIN3B-212ENST00000602204 SHROOM4Q9ULL8 1493 aa36.75■■■■□ 3.47
SIN3B-212ENST00000602204 UNC13AQ9UPW8 1703 aa36.67■■■■□ 3.46
SIN3B-212ENST00000602204 BICRAQ9NZM4 1560 aa36.18■■■■□ 3.38
SIN3B-212ENST00000602204 PABPN1Q86U42 306 aaKnown RBP eCLIP35.75■■■■□ 3.31
SIN3B-212ENST00000602204 CECR2Q9BXF3 1484 aa35.51■■■■□ 3.28
SIN3B-212ENST00000602204 BAZ1AQ9NRL2 1556 aaPredicted RBP35.51■■■■□ 3.27
SIN3B-212ENST00000602204 SMARCA4P51532 1647 aa35.39■■■■□ 3.26
SIN3B-212ENST00000602204 MROH2BQ7Z745 1585 aa35.33■■■■□ 3.25
SIN3B-212ENST00000602204 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.25
SIN3B-212ENST00000602204 SUPT5HO00267 1087 aaKnown RBP35.18■■■■□ 3.22
SIN3B-212ENST00000602204 EIF4G1Q04637 1599 aaKnown RBP35.12■■■■□ 3.21
SIN3B-212ENST00000602204 PEG3Q9GZU2 1588 aa35.07■■■■□ 3.2
SIN3B-212ENST00000602204 WIZO95785 1651 aa35.06■■■■□ 3.2
SIN3B-212ENST00000602204 SMARCA2P51531 1590 aa34.91■■■■□ 3.18
SIN3B-212ENST00000602204 ATAD2BQ9ULI0 1458 aa34.82■■■■□ 3.16
SIN3B-212ENST00000602204 TOP2AP11388 1531 aaKnown RBP34.78■■■■□ 3.16
SIN3B-212ENST00000602204 CC2D2AQ9P2K1 1620 aa34.68■■■■□ 3.14
SIN3B-212ENST00000602204 HMGXB3Q12766 1538 aa34.65■■■■□ 3.14
SIN3B-212ENST00000602204 NCAPD3P42695 1498 aa34.64■■■■□ 3.14
SIN3B-212ENST00000602204 BAZ1BQ9UIG0 1483 aaKnown RBP34.6■■■■□ 3.13
SIN3B-212ENST00000602204 CCDC88BA6NC98 1476 aa34.28■■■■□ 3.08
SIN3B-212ENST00000602204 PRDM2Q13029 1718 aa33.84■■■■□ 3.01
SIN3B-212ENST00000602204 DNAJC5BQ9UF47 199 aa33.84■■■■□ 3.01
SIN3B-212ENST00000602204 CFTRP13569 1480 aa33.74■■■□□ 2.99
SIN3B-212ENST00000602204 CADPSQ9ULU8 1353 aa33.65■■■□□ 2.98
SIN3B-212ENST00000602204 LAMC3Q9Y6N6 1575 aa33.61■■■□□ 2.97
SIN3B-212ENST00000602204 CHIC1Q5VXU3 224 aa33.59■■■□□ 2.97
SIN3B-212ENST00000602204 ABCC8Q09428 1581 aa33.39■■■□□ 2.94
SIN3B-212ENST00000602204 NESP48681 1621 aa33.37■■■□□ 2.93
SIN3B-212ENST00000602204 WRNQ14191 1432 aaPredicted RBP eCLIP33.29■■■□□ 2.92
SIN3B-212ENST00000602204 FANCD2Q9BXW9 1451 aa33.28■■■□□ 2.92
SIN3B-212ENST00000602204 PDS5BQ9NTI5 1447 aa33.25■■■□□ 2.91
SIN3B-212ENST00000602204 TRIM41Q8WV44 630 aa33.23■■■□□ 2.91
SIN3B-212ENST00000602204 BIVM-ERCC5R4GMW8 1640 aa33.23■■■□□ 2.91
SIN3B-212ENST00000602204 SYNJ1O43426 1573 aa33.2■■■□□ 2.91
SIN3B-212ENST00000602204 TOP2BQ02880 1626 aa33.19■■■□□ 2.9
SIN3B-212ENST00000602204 KIF21AQ7Z4S6 1674 aa33.18■■■□□ 2.9
SIN3B-212ENST00000602204 CEP164Q9UPV0 1460 aa33.15■■■□□ 2.9
SIN3B-212ENST00000602204 CUX1P39880 1505 aa33.09■■■□□ 2.89
SIN3B-212ENST00000602204 DNMBPQ6XZF7 1577 aa33.03■■■□□ 2.88
SIN3B-212ENST00000602204 TOPBP1Q92547 1522 aa32.91■■■□□ 2.86
SIN3B-212ENST00000602204 URB2Q14146 1524 aaKnown RBP32.88■■■□□ 2.85
SIN3B-212ENST00000602204 MRC2Q9UBG0 1479 aa32.86■■■□□ 2.85
SIN3B-212ENST00000602204 ERCC6Q03468 1493 aa32.82■■■□□ 2.84
SIN3B-212ENST00000602204 FGD5Q6ZNL6 1462 aa32.78■■■□□ 2.84
SIN3B-212ENST00000602204 WDR62O43379 1518 aa32.76■■■□□ 2.83
SIN3B-212ENST00000602204 THOC2Q8NI27 1593 aaKnown RBP32.75■■■□□ 2.83
SIN3B-212ENST00000602204 EEA1Q15075 1411 aa32.75■■■□□ 2.83
SIN3B-212ENST00000602204 POLA1P09884 1462 aaPredicted RBP32.69■■■□□ 2.82
SIN3B-212ENST00000602204 SOGA1O94964 1423 aa32.62■■■□□ 2.81
SIN3B-212ENST00000602204 WDR97A6NE52 1622 aa32.62■■■□□ 2.81
SIN3B-212ENST00000602204 ABCA10Q8WWZ4 1543 aa32.56■■■□□ 2.8
SIN3B-212ENST00000602204 KIF27Q86VH2 1401 aa32.51■■■□□ 2.8
SIN3B-212ENST00000602204 RUSC2Q8N2Y8 1516 aa32.51■■■□□ 2.8
SIN3B-212ENST00000602204 TARBP1Q13395 1621 aaKnown RBP32.51■■■□□ 2.8
SIN3B-212ENST00000602204 RAD54L2Q9Y4B4 1467 aa32.48■■■□□ 2.79
SIN3B-212ENST00000602204 CUX2O14529 1486 aa32.46■■■□□ 2.79
SIN3B-212ENST00000602204 FAM9AQ8IZU1 332 aaPredicted RBP32.42■■■□□ 2.78
SIN3B-212ENST00000602204 IFT140Q96RY7 1462 aa32.42■■■□□ 2.78
SIN3B-212ENST00000602204 CSRNP3Q8WYN3 585 aa32.39■■■□□ 2.78
SIN3B-212ENST00000602204 ABCA5Q8WWZ7 1642 aa32.38■■■□□ 2.77
SIN3B-212ENST00000602204 KIF21BO75037 1637 aa32.36■■■□□ 2.77
SIN3B-212ENST00000602204 ERICH3Q5RHP9 1530 aa32.23■■■□□ 2.75
SIN3B-212ENST00000602204 CUL7Q14999 1698 aa32.23■■■□□ 2.75
SIN3B-212ENST00000602204 PBRM1Q86U86 1689 aa32.23■■■□□ 2.75
SIN3B-212ENST00000602204 GAPVD1Q14C86 1478 aa32.22■■■□□ 2.75
SIN3B-212ENST00000602204 PRXQ9BXM0 1461 aa32.21■■■□□ 2.75
SIN3B-212ENST00000602204 IGF1RP08069 1367 aa32.19■■■□□ 2.74
SIN3B-212ENST00000602204 GOLGA3Q08378 1498 aa32.18■■■□□ 2.74
SIN3B-212ENST00000602204 TDRD9Q8NDG6 1382 aaKnown RBP32.15■■■□□ 2.74
SIN3B-212ENST00000602204 EIF4G3O43432 1585 aaKnown RBP32.14■■■□□ 2.74
SIN3B-212ENST00000602204 LOC105371045A0A1W2PR82 267 aa32.13■■■□□ 2.73
SIN3B-212ENST00000602204 ZNF608Q9ULD9 1512 aaPredicted RBP32.1■■■□□ 2.73
SIN3B-212ENST00000602204 GRIN2BQ13224 1484 aa32.06■■■□□ 2.72
SIN3B-212ENST00000602204 AQRO60306 1485 aaKnown RBP eCLIP32.04■■■□□ 2.724e-6■■■□□ 16.1
SIN3B-212ENST00000602204 RAPGEF2Q9Y4G8 1499 aa32.04■■■□□ 2.72
SIN3B-212ENST00000602204 CARMIL1Q5VZK9 1371 aa32.04■■■□□ 2.72
SIN3B-212ENST00000602204 TNIKQ9UKE5 1360 aa31.98■■■□□ 2.71
SIN3B-212ENST00000602204 ADAMTS12P58397 1594 aa31.97■■■□□ 2.71
SIN3B-212ENST00000602204 FHAD1B1AJZ9 1412 aa31.9■■■□□ 2.7
SIN3B-212ENST00000602204 MAGI1Q96QZ7 1491 aaPredicted RBP31.9■■■□□ 2.7
SIN3B-212ENST00000602204 UBTFP17480 764 aaKnown RBP31.85■■■□□ 2.69
SIN3B-212ENST00000602204 EHMT2Q96KQ7 1210 aa31.83■■■□□ 2.69
SIN3B-212ENST00000602204 SNAPC4Q5SXM2 1469 aa31.83■■■□□ 2.69
SIN3B-212ENST00000602204 CTTNBP2Q8WZ74 1663 aa31.83■■■□□ 2.69
SIN3B-212ENST00000602204 CEP162Q5TB80 1403 aa31.73■■■□□ 2.67
SIN3B-212ENST00000602204 SYNJ2O15056 1496 aa31.72■■■□□ 2.67
SIN3B-212ENST00000602204 GRIN2AQ12879 1464 aa31.66■■■□□ 2.66
SIN3B-212ENST00000602204 CLIP1P30622 1438 aa31.58■■■□□ 2.65
SIN3B-212ENST00000602204 CHD1O14646 1710 aa31.57■■■□□ 2.64
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms