RNA–Protein interactions for RNA: ENST00000602173.5

RAB4B-208, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 3

Gene RAB4B, Length 592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-208ENST00000602173 NISCHQ9Y2I1 1504 aa31.25■■■□□ 2.59
RAB4B-208ENST00000602173 CCDC180Q9P1Z9 1646 aa28.03■■■□□ 2.08
RAB4B-208ENST00000602173 ABCC9O60706 1549 aa27.85■■■□□ 2.05
RAB4B-208ENST00000602173 RB1CC1Q8TDY2 1594 aa26.58■■□□□ 1.85
RAB4B-208ENST00000602173 NACADO15069 1562 aa26.44■■□□□ 1.82
RAB4B-208ENST00000602173 DCAF8L2P0C7V8 631 aa26.28■■□□□ 1.8
RAB4B-208ENST00000602173 MYO15BQ96JP2 1530 aa26.12■■□□□ 1.77
RAB4B-208ENST00000602173 UNC13AQ9UPW8 1703 aa26.1■■□□□ 1.77
RAB4B-208ENST00000602173 DNAJC5BQ9UF47 199 aa26.03■■□□□ 1.76
RAB4B-208ENST00000602173 PABPN1Q86U42 306 aaKnown RBP eCLIP25.93■■□□□ 1.74
RAB4B-208ENST00000602173 ZCCHC6Q5VYS8 1495 aaKnown RBP25.92■■□□□ 1.74
RAB4B-208ENST00000602173 BICRAQ9NZM4 1560 aa25.83■■□□□ 1.73
RAB4B-208ENST00000602173 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.72
RAB4B-208ENST00000602173 SCRIBQ14160 1630 aa25.51■■□□□ 1.67
RAB4B-208ENST00000602173 SHROOM4Q9ULL8 1493 aa25.45■■□□□ 1.66
RAB4B-208ENST00000602173 CC2D2AQ9P2K1 1620 aa25.2■■□□□ 1.62
RAB4B-208ENST00000602173 EIF4G1Q04637 1599 aaKnown RBP25.16■■□□□ 1.62
RAB4B-208ENST00000602173 CECR2Q9BXF3 1484 aa25.07■■□□□ 1.6
RAB4B-208ENST00000602173 NCAPD3P42695 1498 aa24.39■■□□□ 1.5
RAB4B-208ENST00000602173 SMARCA4P51532 1647 aa24.37■■□□□ 1.49
RAB4B-208ENST00000602173 ATAD2BQ9ULI0 1458 aa24.33■■□□□ 1.49
RAB4B-208ENST00000602173 SMARCA2P51531 1590 aa24.28■■□□□ 1.48
RAB4B-208ENST00000602173 BAZ1AQ9NRL2 1556 aaPredicted RBP24.24■■□□□ 1.47
RAB4B-208ENST00000602173 HMGXB3Q12766 1538 aa24.23■■□□□ 1.47
RAB4B-208ENST00000602173 PEG3Q9GZU2 1588 aa24.13■■□□□ 1.45
RAB4B-208ENST00000602173 BAZ1BQ9UIG0 1483 aaKnown RBP24.09■■□□□ 1.45
RAB4B-208ENST00000602173 MROH2BQ7Z745 1585 aa24.08■■□□□ 1.45
RAB4B-208ENST00000602173 ERCC6Q03468 1493 aa24■■□□□ 1.43
RAB4B-208ENST00000602173 NESP48681 1621 aa23.97■■□□□ 1.43
RAB4B-208ENST00000602173 CUX2O14529 1486 aa23.94■■□□□ 1.42
RAB4B-208ENST00000602173 LAMC3Q9Y6N6 1575 aa23.84■■□□□ 1.41
RAB4B-208ENST00000602173 WIZO95785 1651 aa23.83■■□□□ 1.4
RAB4B-208ENST00000602173 DNAJC5Q9H3Z4 198 aa23.8■■□□□ 1.4
RAB4B-208ENST00000602173 THOC2Q8NI27 1593 aaKnown RBP23.73■■□□□ 1.39
RAB4B-208ENST00000602173 KIF21AQ7Z4S6 1674 aa23.72■■□□□ 1.39
RAB4B-208ENST00000602173 PDS5BQ9NTI5 1447 aa23.66■■□□□ 1.38
RAB4B-208ENST00000602173 CADPSQ9ULU8 1353 aa23.65■■□□□ 1.38
RAB4B-208ENST00000602173 RSF1Q96T23 1441 aaPredicted RBP23.62■■□□□ 1.37
RAB4B-208ENST00000602173 TOP2AP11388 1531 aaKnown RBP23.5■■□□□ 1.35
RAB4B-208ENST00000602173 MRC2Q9UBG0 1479 aa23.45■■□□□ 1.34
RAB4B-208ENST00000602173 CFTRP13569 1480 aa23.42■■□□□ 1.34
RAB4B-208ENST00000602173 WDR62O43379 1518 aa23.41■■□□□ 1.34
RAB4B-208ENST00000602173 CEP164Q9UPV0 1460 aa23.39■■□□□ 1.34
RAB4B-208ENST00000602173 FANCD2Q9BXW9 1451 aa23.37■■□□□ 1.33
RAB4B-208ENST00000602173 PRDM2Q13029 1718 aa23.3■■□□□ 1.32
RAB4B-208ENST00000602173 CCDC88BA6NC98 1476 aa23.24■■□□□ 1.31
RAB4B-208ENST00000602173 URB2Q14146 1524 aaKnown RBP23.19■■□□□ 1.3
RAB4B-208ENST00000602173 TOPBP1Q92547 1522 aa22.97■■□□□ 1.27
RAB4B-208ENST00000602173 ABCC8Q09428 1581 aa22.93■■□□□ 1.26
RAB4B-208ENST00000602173 IFT140Q96RY7 1462 aa22.92■■□□□ 1.26
RAB4B-208ENST00000602173 DNMBPQ6XZF7 1577 aa22.89■■□□□ 1.26
RAB4B-208ENST00000602173 ZNF608Q9ULD9 1512 aaPredicted RBP22.87■■□□□ 1.25
RAB4B-208ENST00000602173 OSCARQ8IYS5 282 aa22.87■■□□□ 1.25
RAB4B-208ENST00000602173 TARBP1Q13395 1621 aaKnown RBP22.79■■□□□ 1.24
RAB4B-208ENST00000602173 EIF4G3O43432 1585 aaKnown RBP22.77■■□□□ 1.24
RAB4B-208ENST00000602173 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
RAB4B-208ENST00000602173 POLA1P09884 1462 aaPredicted RBP22.73■■□□□ 1.23
RAB4B-208ENST00000602173 AQRO60306 1485 aaKnown RBP eCLIP22.68■■□□□ 1.222e-6■■□□□ 13
RAB4B-208ENST00000602173 SUPT5HO00267 1087 aaKnown RBP22.64■■□□□ 1.21
RAB4B-208ENST00000602173 RAD54L2Q9Y4B4 1467 aa22.64■■□□□ 1.21
RAB4B-208ENST00000602173 CHD1O14646 1710 aa22.63■■□□□ 1.21
RAB4B-208ENST00000602173 CUX1P39880 1505 aa22.62■■□□□ 1.21
RAB4B-208ENST00000602173 SOGA1O94964 1423 aa22.62■■□□□ 1.21
RAB4B-208ENST00000602173 FGD5Q6ZNL6 1462 aa22.6■■□□□ 1.21
RAB4B-208ENST00000602173 RIMBP3CA6NJZ7 1639 aa22.6■■□□□ 1.21
RAB4B-208ENST00000602173 RIMBP3BA6NNM3 1639 aa22.6■■□□□ 1.21
RAB4B-208ENST00000602173 RIMBP3Q9UFD9 1639 aa22.6■■□□□ 1.21
RAB4B-208ENST00000602173 TDRD9Q8NDG6 1382 aaKnown RBP22.55■■□□□ 1.2
RAB4B-208ENST00000602173 WDR97A6NE52 1622 aa22.53■■□□□ 1.2
RAB4B-208ENST00000602173 ARHGEF11O15085 1522 aa22.51■■□□□ 1.19
RAB4B-208ENST00000602173 FBLN2P98095 1184 aa22.48■■□□□ 1.19
RAB4B-208ENST00000602173 SNAPC4Q5SXM2 1469 aa22.45■■□□□ 1.18
RAB4B-208ENST00000602173 GRIN2BQ13224 1484 aa22.41■■□□□ 1.18
RAB4B-208ENST00000602173 MAGI1Q96QZ7 1491 aaPredicted RBP22.41■■□□□ 1.18
RAB4B-208ENST00000602173 PBRM1Q86U86 1689 aa22.39■■□□□ 1.18
RAB4B-208ENST00000602173 ABCA10Q8WWZ4 1543 aa22.36■■□□□ 1.17
RAB4B-208ENST00000602173 GAPVD1Q14C86 1478 aa22.35■■□□□ 1.17
RAB4B-208ENST00000602173 CHMP7Q8WUX9 453 aaPredicted RBP22.34■■□□□ 1.17
RAB4B-208ENST00000602173 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
RAB4B-208ENST00000602173 CLASP1Q7Z460 1538 aa22.32■■□□□ 1.16
RAB4B-208ENST00000602173 BIVM-ERCC5R4GMW8 1640 aa22.32■■□□□ 1.16
RAB4B-208ENST00000602173 CYB5RLQ6IPT4 315 aa22.32■■□□□ 1.16
RAB4B-208ENST00000602173 SYNJ2O15056 1496 aa22.32■■□□□ 1.16
RAB4B-208ENST00000602173 SYNJ1O43426 1573 aa22.31■■□□□ 1.16
RAB4B-208ENST00000602173 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
RAB4B-208ENST00000602173 ARAP1Q96P48 1450 aa22.29■■□□□ 1.16
RAB4B-208ENST00000602173 WRNQ14191 1432 aaPredicted RBP eCLIP22.27■■□□□ 1.16
RAB4B-208ENST00000602173 ADAMTS12P58397 1594 aa22.15■■□□□ 1.14
RAB4B-208ENST00000602173 GRIN2AQ12879 1464 aa22.13■■□□□ 1.13
RAB4B-208ENST00000602173 ERICH3Q5RHP9 1530 aa22.09■■□□□ 1.13
RAB4B-208ENST00000602173 FHAD1B1AJZ9 1412 aa22.06■■□□□ 1.12
RAB4B-208ENST00000602173 CEP170Q5SW79 1584 aa22.06■■□□□ 1.12
RAB4B-208ENST00000602173 NUP160Q12769 1436 aa22.06■■□□□ 1.12
RAB4B-208ENST00000602173 TRHP20396 242 aaPredicted RBP22.01■■□□□ 1.11
RAB4B-208ENST00000602173 ERCC6L2Q5T890 1561 aa21.99■■□□□ 1.11
RAB4B-208ENST00000602173 SHROOM2Q13796 1616 aa21.98■■□□□ 1.11
RAB4B-208ENST00000602173 KIF27Q86VH2 1401 aa21.83■■□□□ 1.09
RAB4B-208ENST00000602173 JPH4Q96JJ6 628 aa21.83■■□□□ 1.09
RAB4B-208ENST00000602173 RUSC2Q8N2Y8 1516 aa21.83■■□□□ 1.09
RAB4B-208ENST00000602173 IGF1RP08069 1367 aa21.83■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms