RNA–Protein interactions for RNA: ENST00000602165.1

GTPBP3-228, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 617 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-228ENST00000602165 NISCHQ9Y2I1 1504 aa45.19■■■■■ 4.82
GTPBP3-228ENST00000602165 CCDC180Q9P1Z9 1646 aa40.41■■■■■ 4.06
GTPBP3-228ENST00000602165 ABCC9O60706 1549 aa39.91■■■■□ 3.98
GTPBP3-228ENST00000602165 RB1CC1Q8TDY2 1594 aa38.2■■■■□ 3.71
GTPBP3-228ENST00000602165 NACADO15069 1562 aa38.03■■■■□ 3.68
GTPBP3-228ENST00000602165 DCAF8L2P0C7V8 631 aa37.93■■■■□ 3.66
GTPBP3-228ENST00000602165 MYO15BQ96JP2 1530 aa37.62■■■■□ 3.61
GTPBP3-228ENST00000602165 ZCCHC6Q5VYS8 1495 aaKnown RBP37.57■■■■□ 3.6
GTPBP3-228ENST00000602165 UNC13AQ9UPW8 1703 aa37.47■■■■□ 3.59
GTPBP3-228ENST00000602165 DCAF1Q9Y4B6 1507 aa37.33■■■■□ 3.57
GTPBP3-228ENST00000602165 PABPN1Q86U42 306 aaKnown RBP eCLIP37.2■■■■□ 3.55
GTPBP3-228ENST00000602165 BICRAQ9NZM4 1560 aa37.09■■■■□ 3.53
GTPBP3-228ENST00000602165 DNAJC5BQ9UF47 199 aa36.97■■■■□ 3.51
GTPBP3-228ENST00000602165 SCRIBQ14160 1630 aa36.88■■■■□ 3.49
GTPBP3-228ENST00000602165 SHROOM4Q9ULL8 1493 aa36.56■■■■□ 3.44
GTPBP3-228ENST00000602165 EIF4G1Q04637 1599 aaKnown RBP36.13■■■■□ 3.37
GTPBP3-228ENST00000602165 CC2D2AQ9P2K1 1620 aa36.11■■■■□ 3.37
GTPBP3-228ENST00000602165 CECR2Q9BXF3 1484 aa35.88■■■■□ 3.33
GTPBP3-228ENST00000602165 SMARCA4P51532 1647 aa35.21■■■■□ 3.23
GTPBP3-228ENST00000602165 NCAPD3P42695 1498 aa35.06■■■■□ 3.2
GTPBP3-228ENST00000602165 BAZ1AQ9NRL2 1556 aaPredicted RBP35.05■■■■□ 3.2
GTPBP3-228ENST00000602165 ATAD2BQ9ULI0 1458 aa35.05■■■■□ 3.2
GTPBP3-228ENST00000602165 SMARCA2P51531 1590 aa35■■■■□ 3.19
GTPBP3-228ENST00000602165 HMGXB3Q12766 1538 aa34.9■■■■□ 3.18
GTPBP3-228ENST00000602165 MROH2BQ7Z745 1585 aa34.85■■■■□ 3.17
GTPBP3-228ENST00000602165 PEG3Q9GZU2 1588 aa34.82■■■■□ 3.16
GTPBP3-228ENST00000602165 BAZ1BQ9UIG0 1483 aaKnown RBP34.77■■■■□ 3.16
GTPBP3-228ENST00000602165 WIZO95785 1651 aa34.51■■■■□ 3.12
GTPBP3-228ENST00000602165 NESP48681 1621 aa34.44■■■■□ 3.1
GTPBP3-228ENST00000602165 ERCC6Q03468 1493 aa34.42■■■■□ 3.1
GTPBP3-228ENST00000602165 RSF1Q96T23 1441 aaPredicted RBP34.27■■■■□ 3.08
GTPBP3-228ENST00000602165 LAMC3Q9Y6N6 1575 aa34.26■■■■□ 3.07
GTPBP3-228ENST00000602165 CUX2O14529 1486 aa34.17■■■■□ 3.06
GTPBP3-228ENST00000602165 KIF21AQ7Z4S6 1674 aa34.09■■■■□ 3.05
GTPBP3-228ENST00000602165 TOP2AP11388 1531 aaKnown RBP34.06■■■■□ 3.04
GTPBP3-228ENST00000602165 THOC2Q8NI27 1593 aaKnown RBP34.02■■■■□ 3.04
GTPBP3-228ENST00000602165 CADPSQ9ULU8 1353 aa34.02■■■■□ 3.04
GTPBP3-228ENST00000602165 PDS5BQ9NTI5 1447 aa33.99■■■■□ 3.03
GTPBP3-228ENST00000602165 CFTRP13569 1480 aa33.76■■■□□ 2.99
GTPBP3-228ENST00000602165 MRC2Q9UBG0 1479 aa33.71■■■□□ 2.99
GTPBP3-228ENST00000602165 FANCD2Q9BXW9 1451 aa33.68■■■□□ 2.98
GTPBP3-228ENST00000602165 CEP164Q9UPV0 1460 aa33.68■■■□□ 2.98
GTPBP3-228ENST00000602165 CCDC88BA6NC98 1476 aa33.64■■■□□ 2.98
GTPBP3-228ENST00000602165 WDR62O43379 1518 aa33.63■■■□□ 2.97
GTPBP3-228ENST00000602165 PRDM2Q13029 1718 aa33.62■■■□□ 2.97
GTPBP3-228ENST00000602165 DNAJC5Q9H3Z4 198 aa33.56■■■□□ 2.96
GTPBP3-228ENST00000602165 URB2Q14146 1524 aaKnown RBP33.38■■■□□ 2.93
GTPBP3-228ENST00000602165 SUPT5HO00267 1087 aaKnown RBP33.12■■■□□ 2.89
GTPBP3-228ENST00000602165 TOPBP1Q92547 1522 aa33.11■■■□□ 2.89
GTPBP3-228ENST00000602165 DNMBPQ6XZF7 1577 aa33.04■■■□□ 2.88
GTPBP3-228ENST00000602165 ABCC8Q09428 1581 aa33.02■■■□□ 2.88
GTPBP3-228ENST00000602165 IFT140Q96RY7 1462 aa32.96■■■□□ 2.87
GTPBP3-228ENST00000602165 ZNF608Q9ULD9 1512 aaPredicted RBP32.9■■■□□ 2.86
GTPBP3-228ENST00000602165 TARBP1Q13395 1621 aaKnown RBP32.8■■■□□ 2.84
GTPBP3-228ENST00000602165 POLA1P09884 1462 aaPredicted RBP32.8■■■□□ 2.84
GTPBP3-228ENST00000602165 EIF4G3O43432 1585 aaKnown RBP32.79■■■□□ 2.84
GTPBP3-228ENST00000602165 CUX1P39880 1505 aa32.72■■■□□ 2.83
GTPBP3-228ENST00000602165 RAD54L2Q9Y4B4 1467 aa32.67■■■□□ 2.82
GTPBP3-228ENST00000602165 FGD5Q6ZNL6 1462 aa32.67■■■□□ 2.82
GTPBP3-228ENST00000602165 OSCARQ8IYS5 282 aa32.65■■■□□ 2.82
GTPBP3-228ENST00000602165 AQRO60306 1485 aaKnown RBP eCLIP32.64■■■□□ 2.822e-8■■■■■ 35.5
GTPBP3-228ENST00000602165 SOGA1O94964 1423 aa32.62■■■□□ 2.81
GTPBP3-228ENST00000602165 TDRD9Q8NDG6 1382 aaKnown RBP32.51■■■□□ 2.79
GTPBP3-228ENST00000602165 CHD1O14646 1710 aa32.51■■■□□ 2.79
GTPBP3-228ENST00000602165 WDR97A6NE52 1622 aa32.48■■■□□ 2.79
GTPBP3-228ENST00000602165 BIVM-ERCC5R4GMW8 1640 aa32.37■■■□□ 2.77
GTPBP3-228ENST00000602165 TRIM41Q8WV44 630 aa32.35■■■□□ 2.77
GTPBP3-228ENST00000602165 SNAPC4Q5SXM2 1469 aa32.35■■■□□ 2.77
GTPBP3-228ENST00000602165 TOP2BQ02880 1626 aa32.33■■■□□ 2.77
GTPBP3-228ENST00000602165 SYNJ1O43426 1573 aa32.33■■■□□ 2.77
GTPBP3-228ENST00000602165 PBRM1Q86U86 1689 aa32.33■■■□□ 2.77
GTPBP3-228ENST00000602165 WRNQ14191 1432 aaPredicted RBP eCLIP32.33■■■□□ 2.77
GTPBP3-228ENST00000602165 FBLN2P98095 1184 aa32.32■■■□□ 2.76
GTPBP3-228ENST00000602165 ABCA10Q8WWZ4 1543 aa32.3■■■□□ 2.76
GTPBP3-228ENST00000602165 GRIN2BQ13224 1484 aa32.29■■■□□ 2.76
GTPBP3-228ENST00000602165 RIMBP3CA6NJZ7 1639 aa32.29■■■□□ 2.76
GTPBP3-228ENST00000602165 RIMBP3BA6NNM3 1639 aa32.29■■■□□ 2.76
GTPBP3-228ENST00000602165 RIMBP3Q9UFD9 1639 aa32.29■■■□□ 2.76
GTPBP3-228ENST00000602165 ABCA5Q8WWZ7 1642 aa32.26■■■□□ 2.76
GTPBP3-228ENST00000602165 GAPVD1Q14C86 1478 aa32.26■■■□□ 2.75
GTPBP3-228ENST00000602165 MAGI1Q96QZ7 1491 aaPredicted RBP32.25■■■□□ 2.75
GTPBP3-228ENST00000602165 ARHGEF11O15085 1522 aa32.2■■■□□ 2.74
GTPBP3-228ENST00000602165 CHMP7Q8WUX9 453 aaPredicted RBP32.14■■■□□ 2.74
GTPBP3-228ENST00000602165 SYNJ2O15056 1496 aa32.14■■■□□ 2.74
GTPBP3-228ENST00000602165 CLASP1Q7Z460 1538 aa32.05■■■□□ 2.72
GTPBP3-228ENST00000602165 ADAMTS12P58397 1594 aa31.98■■■□□ 2.71
GTPBP3-228ENST00000602165 ARAP1Q96P48 1450 aa31.91■■■□□ 2.7
GTPBP3-228ENST00000602165 ERICH3Q5RHP9 1530 aa31.91■■■□□ 2.7
GTPBP3-228ENST00000602165 GRIN2AQ12879 1464 aa31.9■■■□□ 2.7
GTPBP3-228ENST00000602165 CYB5RLQ6IPT4 315 aa31.88■■■□□ 2.69
GTPBP3-228ENST00000602165 FHAD1B1AJZ9 1412 aa31.84■■■□□ 2.69
GTPBP3-228ENST00000602165 CEP170Q5SW79 1584 aa31.81■■■□□ 2.68
GTPBP3-228ENST00000602165 NUP160Q12769 1436 aa31.75■■■□□ 2.67
GTPBP3-228ENST00000602165 KIF27Q86VH2 1401 aa31.66■■■□□ 2.66
GTPBP3-228ENST00000602165 ERCC6L2Q5T890 1561 aa31.63■■■□□ 2.65
GTPBP3-228ENST00000602165 SHROOM2Q13796 1616 aa31.61■■■□□ 2.65
GTPBP3-228ENST00000602165 CUL7Q14999 1698 aa31.59■■■□□ 2.65
GTPBP3-228ENST00000602165 IGF1RP08069 1367 aa31.57■■■□□ 2.64
GTPBP3-228ENST00000602165 RUSC2Q8N2Y8 1516 aa31.53■■■□□ 2.64
GTPBP3-228ENST00000602165 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms