RNA–Protein interactions for RNA: ENST00000602159.1

CPAMD8-220, Transcript of C3 and PZP like, alpha-2-macroglobulin domain containing 8, humanhuman

TSL 3

Gene CPAMD8, Length 510 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPAMD8-220ENST00000602159 NISCHQ9Y2I1 1504 aa28.26■■■□□ 2.11
CPAMD8-220ENST00000602159 CCDC180Q9P1Z9 1646 aa25.01■■□□□ 1.59
CPAMD8-220ENST00000602159 ABCC9O60706 1549 aa23.88■■□□□ 1.41
CPAMD8-220ENST00000602159 ZCCHC6Q5VYS8 1495 aaKnown RBP23.7■■□□□ 1.38
CPAMD8-220ENST00000602159 DCAF1Q9Y4B6 1507 aa23.41■■□□□ 1.34
CPAMD8-220ENST00000602159 MYO15BQ96JP2 1530 aa23.32■■□□□ 1.32
CPAMD8-220ENST00000602159 NACADO15069 1562 aa23.28■■□□□ 1.32
CPAMD8-220ENST00000602159 RB1CC1Q8TDY2 1594 aa23.19■■□□□ 1.3
CPAMD8-220ENST00000602159 DCAF8L2P0C7V8 631 aa23.11■■□□□ 1.29
CPAMD8-220ENST00000602159 UNC13AQ9UPW8 1703 aa22.88■■□□□ 1.25
CPAMD8-220ENST00000602159 SCRIBQ14160 1630 aa22.83■■□□□ 1.25
CPAMD8-220ENST00000602159 BICRAQ9NZM4 1560 aa22.6■■□□□ 1.21
CPAMD8-220ENST00000602159 SHROOM4Q9ULL8 1493 aa22.54■■□□□ 1.2
CPAMD8-220ENST00000602159 PABPN1Q86U42 306 aaKnown RBP eCLIP22.29■■□□□ 1.16
CPAMD8-220ENST00000602159 CECR2Q9BXF3 1484 aa21.98■■□□□ 1.11
CPAMD8-220ENST00000602159 EIF4G1Q04637 1599 aaKnown RBP21.9■■□□□ 1.1
CPAMD8-220ENST00000602159 SMARCA4P51532 1647 aa21.88■■□□□ 1.09
CPAMD8-220ENST00000602159 BAZ1AQ9NRL2 1556 aaPredicted RBP21.86■■□□□ 1.09
CPAMD8-220ENST00000602159 MROH2BQ7Z745 1585 aa21.82■■□□□ 1.08
CPAMD8-220ENST00000602159 RSF1Q96T23 1441 aaPredicted RBP21.69■■□□□ 1.06
CPAMD8-220ENST00000602159 CC2D2AQ9P2K1 1620 aa21.69■■□□□ 1.06
CPAMD8-220ENST00000602159 PEG3Q9GZU2 1588 aa21.66■■□□□ 1.06
CPAMD8-220ENST00000602159 WIZO95785 1651 aa21.64■■□□□ 1.05
CPAMD8-220ENST00000602159 ATAD2BQ9ULI0 1458 aa21.56■■□□□ 1.04
CPAMD8-220ENST00000602159 DNAJC5BQ9UF47 199 aa21.55■■□□□ 1.04
CPAMD8-220ENST00000602159 SMARCA2P51531 1590 aa21.55■■□□□ 1.04
CPAMD8-220ENST00000602159 HMGXB3Q12766 1538 aa21.47■■□□□ 1.03
CPAMD8-220ENST00000602159 NCAPD3P42695 1498 aa21.45■■□□□ 1.02
CPAMD8-220ENST00000602159 TOP2AP11388 1531 aaKnown RBP21.42■■□□□ 1.02
CPAMD8-220ENST00000602159 BAZ1BQ9UIG0 1483 aaKnown RBP21.39■■□□□ 1.02
CPAMD8-220ENST00000602159 SUPT5HO00267 1087 aaKnown RBP21.32■■□□□ 1
CPAMD8-220ENST00000602159 CCDC88BA6NC98 1476 aa21.1■□□□□ 0.97
CPAMD8-220ENST00000602159 PRDM2Q13029 1718 aa20.91■□□□□ 0.94
CPAMD8-220ENST00000602159 NESP48681 1621 aa20.86■□□□□ 0.93
CPAMD8-220ENST00000602159 LAMC3Q9Y6N6 1575 aa20.85■□□□□ 0.93
CPAMD8-220ENST00000602159 CFTRP13569 1480 aa20.85■□□□□ 0.93
CPAMD8-220ENST00000602159 CADPSQ9ULU8 1353 aa20.79■□□□□ 0.92
CPAMD8-220ENST00000602159 KIF21AQ7Z4S6 1674 aa20.72■□□□□ 0.91
CPAMD8-220ENST00000602159 FANCD2Q9BXW9 1451 aa20.62■□□□□ 0.89
CPAMD8-220ENST00000602159 PDS5BQ9NTI5 1447 aa20.56■□□□□ 0.88
CPAMD8-220ENST00000602159 ABCC8Q09428 1581 aa20.55■□□□□ 0.88
CPAMD8-220ENST00000602159 CEP164Q9UPV0 1460 aa20.55■□□□□ 0.88
CPAMD8-220ENST00000602159 THOC2Q8NI27 1593 aaKnown RBP20.54■□□□□ 0.88
CPAMD8-220ENST00000602159 SYNJ1O43426 1573 aa20.47■□□□□ 0.87
CPAMD8-220ENST00000602159 ERCC6Q03468 1493 aa20.47■□□□□ 0.87
CPAMD8-220ENST00000602159 CUX1P39880 1505 aa20.45■□□□□ 0.86
CPAMD8-220ENST00000602159 URB2Q14146 1524 aaKnown RBP20.45■□□□□ 0.86
CPAMD8-220ENST00000602159 BIVM-ERCC5R4GMW8 1640 aa20.45■□□□□ 0.86
CPAMD8-220ENST00000602159 MRC2Q9UBG0 1479 aa20.43■□□□□ 0.86
CPAMD8-220ENST00000602159 DNMBPQ6XZF7 1577 aa20.43■□□□□ 0.86
CPAMD8-220ENST00000602159 WDR62O43379 1518 aa20.43■□□□□ 0.86
CPAMD8-220ENST00000602159 TOP2BQ02880 1626 aa20.4■□□□□ 0.86
CPAMD8-220ENST00000602159 WRNQ14191 1432 aaPredicted RBP eCLIP20.39■□□□□ 0.85
CPAMD8-220ENST00000602159 TOPBP1Q92547 1522 aa20.38■□□□□ 0.85
CPAMD8-220ENST00000602159 FGD5Q6ZNL6 1462 aa20.27■□□□□ 0.84
CPAMD8-220ENST00000602159 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
CPAMD8-220ENST00000602159 WDR97A6NE52 1622 aa20.24■□□□□ 0.83
CPAMD8-220ENST00000602159 CHIC1Q5VXU3 224 aa20.24■□□□□ 0.83
CPAMD8-220ENST00000602159 CUX2O14529 1486 aa20.21■□□□□ 0.83
CPAMD8-220ENST00000602159 TARBP1Q13395 1621 aaKnown RBP20.2■□□□□ 0.82
CPAMD8-220ENST00000602159 RAD54L2Q9Y4B4 1467 aa20.13■□□□□ 0.81
CPAMD8-220ENST00000602159 ABCA10Q8WWZ4 1543 aa20.08■□□□□ 0.81
CPAMD8-220ENST00000602159 IFT140Q96RY7 1462 aa20.08■□□□□ 0.81
CPAMD8-220ENST00000602159 TRIM41Q8WV44 630 aa20.08■□□□□ 0.81
CPAMD8-220ENST00000602159 ABCA5Q8WWZ7 1642 aa20.07■□□□□ 0.8
CPAMD8-220ENST00000602159 SOGA1O94964 1423 aa20.05■□□□□ 0.8
CPAMD8-220ENST00000602159 EIF4G3O43432 1585 aaKnown RBP20.04■□□□□ 0.8
CPAMD8-220ENST00000602159 ZNF608Q9ULD9 1512 aaPredicted RBP20.02■□□□□ 0.79
CPAMD8-220ENST00000602159 RUSC2Q8N2Y8 1516 aa19.98■□□□□ 0.79
CPAMD8-220ENST00000602159 PBRM1Q86U86 1689 aa19.98■□□□□ 0.79
CPAMD8-220ENST00000602159 TDRD9Q8NDG6 1382 aaKnown RBP19.9■□□□□ 0.78
CPAMD8-220ENST00000602159 AQRO60306 1485 aaKnown RBP eCLIP19.89■□□□□ 0.77
CPAMD8-220ENST00000602159 KIF27Q86VH2 1401 aa19.89■□□□□ 0.77
CPAMD8-220ENST00000602159 GAPVD1Q14C86 1478 aa19.88■□□□□ 0.77
CPAMD8-220ENST00000602159 ERICH3Q5RHP9 1530 aa19.84■□□□□ 0.77
CPAMD8-220ENST00000602159 ADAMTS12P58397 1594 aa19.83■□□□□ 0.77
CPAMD8-220ENST00000602159 EEA1Q15075 1411 aa19.83■□□□□ 0.76
CPAMD8-220ENST00000602159 GRIN2BQ13224 1484 aa19.81■□□□□ 0.76
CPAMD8-220ENST00000602159 CUL7Q14999 1698 aa19.81■□□□□ 0.76
CPAMD8-220ENST00000602159 SNAPC4Q5SXM2 1469 aa19.78■□□□□ 0.76
CPAMD8-220ENST00000602159 IGF1RP08069 1367 aa19.75■□□□□ 0.75
CPAMD8-220ENST00000602159 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
CPAMD8-220ENST00000602159 KIF21BO75037 1637 aa19.73■□□□□ 0.75
CPAMD8-220ENST00000602159 PRXQ9BXM0 1461 aa19.72■□□□□ 0.75
CPAMD8-220ENST00000602159 CHD1O14646 1710 aa19.71■□□□□ 0.75
CPAMD8-220ENST00000602159 FAM9AQ8IZU1 332 aaPredicted RBP19.69■□□□□ 0.74
CPAMD8-220ENST00000602159 FHAD1B1AJZ9 1412 aa19.66■□□□□ 0.74
CPAMD8-220ENST00000602159 SYNJ2O15056 1496 aa19.65■□□□□ 0.74
CPAMD8-220ENST00000602159 CSRNP3Q8WYN3 585 aa19.64■□□□□ 0.73
CPAMD8-220ENST00000602159 RAPGEF2Q9Y4G8 1499 aa19.63■□□□□ 0.73
CPAMD8-220ENST00000602159 DNAJC5Q9H3Z4 198 aa19.62■□□□□ 0.73
CPAMD8-220ENST00000602159 CARMIL1Q5VZK9 1371 aa19.61■□□□□ 0.73
CPAMD8-220ENST00000602159 GRIN2AQ12879 1464 aa19.6■□□□□ 0.73
CPAMD8-220ENST00000602159 CEP170Q5SW79 1584 aa19.57■□□□□ 0.72
CPAMD8-220ENST00000602159 CTTNBP2Q8WZ74 1663 aa19.57■□□□□ 0.72
CPAMD8-220ENST00000602159 GOLGA3Q08378 1498 aa19.57■□□□□ 0.72
CPAMD8-220ENST00000602159 NUP160Q12769 1436 aa19.51■□□□□ 0.71
CPAMD8-220ENST00000602159 CLASP1Q7Z460 1538 aa19.47■□□□□ 0.71
CPAMD8-220ENST00000602159 CHMP7Q8WUX9 453 aaPredicted RBP19.42■□□□□ 0.7
CPAMD8-220ENST00000602159 IQGAP2Q13576 1575 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms