RNA–Protein interactions for RNA: ENST00000602056.1

GTPBP3-227, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 2

Gene GTPBP3, Length 861 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-227ENST00000602056 NISCHQ9Y2I1 1504 aa58.27■■■■■ 6.92
GTPBP3-227ENST00000602056 ABCC9O60706 1549 aa52.17■■■■■ 5.94
GTPBP3-227ENST00000602056 CCDC180Q9P1Z9 1646 aa52.07■■■■■ 5.93
GTPBP3-227ENST00000602056 RB1CC1Q8TDY2 1594 aa49.58■■■■■ 5.53
GTPBP3-227ENST00000602056 NACADO15069 1562 aa49.3■■■■■ 5.48
GTPBP3-227ENST00000602056 DCAF8L2P0C7V8 631 aa49.17■■■■■ 5.46
GTPBP3-227ENST00000602056 DNAJC5BQ9UF47 199 aa49.01■■■■■ 5.44
GTPBP3-227ENST00000602056 MYO15BQ96JP2 1530 aa48.68■■■■■ 5.38
GTPBP3-227ENST00000602056 PABPN1Q86U42 306 aaKnown RBP eCLIP48.67■■■■■ 5.38
GTPBP3-227ENST00000602056 UNC13AQ9UPW8 1703 aa48.38■■■■■ 5.33
GTPBP3-227ENST00000602056 ZCCHC6Q5VYS8 1495 aaKnown RBP48.31■■■■■ 5.32
GTPBP3-227ENST00000602056 BICRAQ9NZM4 1560 aa48.24■■■■■ 5.31
GTPBP3-227ENST00000602056 DCAF1Q9Y4B6 1507 aa48.11■■■■■ 5.29
GTPBP3-227ENST00000602056 SCRIBQ14160 1630 aa47.56■■■■■ 5.2
GTPBP3-227ENST00000602056 SHROOM4Q9ULL8 1493 aa47.52■■■■■ 5.2
GTPBP3-227ENST00000602056 CC2D2AQ9P2K1 1620 aa47.07■■■■■ 5.13
GTPBP3-227ENST00000602056 EIF4G1Q04637 1599 aaKnown RBP47.01■■■■■ 5.12
GTPBP3-227ENST00000602056 CECR2Q9BXF3 1484 aa46.97■■■■■ 5.11
GTPBP3-227ENST00000602056 NCAPD3P42695 1498 aa45.61■■■■■ 4.89
GTPBP3-227ENST00000602056 ATAD2BQ9ULI0 1458 aa45.49■■■■■ 4.87
GTPBP3-227ENST00000602056 SMARCA4P51532 1647 aa45.37■■■■■ 4.85
GTPBP3-227ENST00000602056 SMARCA2P51531 1590 aa45.26■■■■■ 4.84
GTPBP3-227ENST00000602056 HMGXB3Q12766 1538 aa45.19■■■■■ 4.82
GTPBP3-227ENST00000602056 BAZ1AQ9NRL2 1556 aaPredicted RBP45.16■■■■■ 4.82
GTPBP3-227ENST00000602056 BAZ1BQ9UIG0 1483 aaKnown RBP44.98■■■■■ 4.79
GTPBP3-227ENST00000602056 ERCC6Q03468 1493 aa44.97■■■■■ 4.79
GTPBP3-227ENST00000602056 PEG3Q9GZU2 1588 aa44.95■■■■■ 4.79
GTPBP3-227ENST00000602056 MROH2BQ7Z745 1585 aa44.94■■■■■ 4.78
GTPBP3-227ENST00000602056 NESP48681 1621 aa44.87■■■■■ 4.77
GTPBP3-227ENST00000602056 CUX2O14529 1486 aa44.87■■■■■ 4.77
GTPBP3-227ENST00000602056 DNAJC5Q9H3Z4 198 aa44.85■■■■■ 4.77
GTPBP3-227ENST00000602056 LAMC3Q9Y6N6 1575 aa44.44■■■■■ 4.71
GTPBP3-227ENST00000602056 WIZO95785 1651 aa44.32■■■■■ 4.68
GTPBP3-227ENST00000602056 THOC2Q8NI27 1593 aaKnown RBP44.3■■■■■ 4.68
GTPBP3-227ENST00000602056 PDS5BQ9NTI5 1447 aa44.24■■■■■ 4.67
GTPBP3-227ENST00000602056 CADPSQ9ULU8 1353 aa44.23■■■■■ 4.67
GTPBP3-227ENST00000602056 KIF21AQ7Z4S6 1674 aa44.13■■■■■ 4.65
GTPBP3-227ENST00000602056 RSF1Q96T23 1441 aaPredicted RBP44.07■■■■■ 4.65
GTPBP3-227ENST00000602056 MRC2Q9UBG0 1479 aa43.87■■■■■ 4.61
GTPBP3-227ENST00000602056 TOP2AP11388 1531 aaKnown RBP43.78■■■■■ 4.6
GTPBP3-227ENST00000602056 WDR62O43379 1518 aa43.75■■■■■ 4.59
GTPBP3-227ENST00000602056 CFTRP13569 1480 aa43.74■■■■■ 4.59
GTPBP3-227ENST00000602056 FANCD2Q9BXW9 1451 aa43.7■■■■■ 4.59
GTPBP3-227ENST00000602056 CEP164Q9UPV0 1460 aa43.69■■■■■ 4.58
GTPBP3-227ENST00000602056 URB2Q14146 1524 aaKnown RBP43.36■■■■■ 4.53
GTPBP3-227ENST00000602056 CCDC88BA6NC98 1476 aa43.35■■■■■ 4.53
GTPBP3-227ENST00000602056 PRDM2Q13029 1718 aa43.02■■■■■ 4.48
GTPBP3-227ENST00000602056 OSCARQ8IYS5 282 aa42.9■■■■■ 4.46
GTPBP3-227ENST00000602056 TOPBP1Q92547 1522 aa42.88■■■■■ 4.46
GTPBP3-227ENST00000602056 TRIM41Q8WV44 630 aa42.88■■■■■ 4.45
GTPBP3-227ENST00000602056 IFT140Q96RY7 1462 aa42.84■■■■■ 4.45
GTPBP3-227ENST00000602056 ZNF608Q9ULD9 1512 aaPredicted RBP42.83■■■■■ 4.45
GTPBP3-227ENST00000602056 ABCC8Q09428 1581 aa42.72■■■■■ 4.43
GTPBP3-227ENST00000602056 DNMBPQ6XZF7 1577 aa42.67■■■■■ 4.42
GTPBP3-227ENST00000602056 EIF4G3O43432 1585 aaKnown RBP42.47■■■■■ 4.39
GTPBP3-227ENST00000602056 POLA1P09884 1462 aaPredicted RBP42.46■■■■■ 4.39
GTPBP3-227ENST00000602056 TARBP1Q13395 1621 aaKnown RBP42.46■■■■■ 4.39
GTPBP3-227ENST00000602056 AQRO60306 1485 aaKnown RBP eCLIP42.45■■■■■ 4.391e-7■■■■■ 35.8
GTPBP3-227ENST00000602056 RAD54L2Q9Y4B4 1467 aa42.34■■■■■ 4.37
GTPBP3-227ENST00000602056 SOGA1O94964 1423 aa42.28■■■■■ 4.36
GTPBP3-227ENST00000602056 RIMBP3CA6NJZ7 1639 aa42.24■■■■■ 4.35
GTPBP3-227ENST00000602056 RIMBP3BA6NNM3 1639 aa42.24■■■■■ 4.35
GTPBP3-227ENST00000602056 RIMBP3Q9UFD9 1639 aa42.24■■■■■ 4.35
GTPBP3-227ENST00000602056 TDRD9Q8NDG6 1382 aaKnown RBP42.23■■■■■ 4.35
GTPBP3-227ENST00000602056 FGD5Q6ZNL6 1462 aa42.2■■■■■ 4.35
GTPBP3-227ENST00000602056 CUX1P39880 1505 aa42.2■■■■■ 4.35
GTPBP3-227ENST00000602056 SUPT5HO00267 1087 aaKnown RBP42.18■■■■■ 4.34
GTPBP3-227ENST00000602056 ARHGEF11O15085 1522 aa42.17■■■■■ 4.34
GTPBP3-227ENST00000602056 FBLN2P98095 1184 aa42.11■■■■■ 4.33
GTPBP3-227ENST00000602056 CHD1O14646 1710 aa42.07■■■■■ 4.33
GTPBP3-227ENST00000602056 SNAPC4Q5SXM2 1469 aa41.98■■■■■ 4.31
GTPBP3-227ENST00000602056 WDR97A6NE52 1622 aa41.94■■■■■ 4.3
GTPBP3-227ENST00000602056 CYB5RLQ6IPT4 315 aa41.92■■■■■ 4.3
GTPBP3-227ENST00000602056 GRIN2BQ13224 1484 aa41.86■■■■■ 4.29
GTPBP3-227ENST00000602056 MAGI1Q96QZ7 1491 aaPredicted RBP41.83■■■■■ 4.29
GTPBP3-227ENST00000602056 CHMP7Q8WUX9 453 aaPredicted RBP41.82■■■■■ 4.29
GTPBP3-227ENST00000602056 ARAP1Q96P48 1450 aa41.81■■■■■ 4.28
GTPBP3-227ENST00000602056 GAPVD1Q14C86 1478 aa41.74■■■■■ 4.27
GTPBP3-227ENST00000602056 CLASP1Q7Z460 1538 aa41.72■■■■■ 4.27
GTPBP3-227ENST00000602056 ABCA10Q8WWZ4 1543 aa41.72■■■■■ 4.27
GTPBP3-227ENST00000602056 SYNJ2O15056 1496 aa41.72■■■■■ 4.27
GTPBP3-227ENST00000602056 SYNJ1O43426 1573 aa41.63■■■■■ 4.25
GTPBP3-227ENST00000602056 ABCA5Q8WWZ7 1642 aa41.6■■■■■ 4.25
GTPBP3-227ENST00000602056 WRNQ14191 1432 aaPredicted RBP eCLIP41.57■■■■■ 4.25
GTPBP3-227ENST00000602056 PBRM1Q86U86 1689 aa41.56■■■■■ 4.24
GTPBP3-227ENST00000602056 TOP2BQ02880 1626 aa41.47■■■■■ 4.23
GTPBP3-227ENST00000602056 BIVM-ERCC5R4GMW8 1640 aa41.44■■■■■ 4.22
GTPBP3-227ENST00000602056 TRHP20396 242 aaPredicted RBP41.36■■■■■ 4.21
GTPBP3-227ENST00000602056 GRIN2AQ12879 1464 aa41.34■■■■■ 4.21
GTPBP3-227ENST00000602056 ADAMTS12P58397 1594 aa41.29■■■■■ 4.2
GTPBP3-227ENST00000602056 NUP160Q12769 1436 aa41.24■■■■■ 4.19
GTPBP3-227ENST00000602056 FHAD1B1AJZ9 1412 aa41.23■■■■■ 4.19
GTPBP3-227ENST00000602056 CEP170Q5SW79 1584 aa41.17■■■■■ 4.18
GTPBP3-227ENST00000602056 ERICH3Q5RHP9 1530 aa41.15■■■■■ 4.18
GTPBP3-227ENST00000602056 ERCC6L2Q5T890 1561 aa41.13■■■■■ 4.18
GTPBP3-227ENST00000602056 SHROOM2Q13796 1616 aa40.94■■■■■ 4.14
GTPBP3-227ENST00000602056 JPH4Q96JJ6 628 aa40.83■■■■■ 4.13
GTPBP3-227ENST00000602056 PRG4Q92954 1404 aaPredicted RBP40.81■■■■■ 4.12
GTPBP3-227ENST00000602056 IGF1RP08069 1367 aa40.78■■■■■ 4.12
GTPBP3-227ENST00000602056 KIF27Q86VH2 1401 aa40.71■■■■■ 4.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms