RNA–Protein interactions for RNA: ENST00000602001.1

CRX-205, Transcript of cone-rod homeobox, humanhuman

TSL 5

Gene CRX, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRX-205ENST00000602001 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
CRX-205ENST00000602001 ABCC9O60706 1549 aa27.51■■□□□ 1.99
CRX-205ENST00000602001 CCDC180Q9P1Z9 1646 aa27.33■■□□□ 1.97
CRX-205ENST00000602001 RB1CC1Q8TDY2 1594 aa26■■□□□ 1.75
CRX-205ENST00000602001 DCAF8L2P0C7V8 631 aa25.93■■□□□ 1.74
CRX-205ENST00000602001 DNAJC5BQ9UF47 199 aa25.87■■□□□ 1.73
CRX-205ENST00000602001 NACADO15069 1562 aa25.82■■□□□ 1.72
CRX-205ENST00000602001 PABPN1Q86U42 306 aaKnown RBP eCLIP25.68■■□□□ 1.7
CRX-205ENST00000602001 UNC13AQ9UPW8 1703 aa25.6■■□□□ 1.69
CRX-205ENST00000602001 BICRAQ9NZM4 1560 aa25.42■■□□□ 1.66
CRX-205ENST00000602001 MYO15BQ96JP2 1530 aa25.4■■□□□ 1.66
CRX-205ENST00000602001 ZCCHC6Q5VYS8 1495 aaKnown RBP25.4■■□□□ 1.66
CRX-205ENST00000602001 DCAF1Q9Y4B6 1507 aa25.15■■□□□ 1.62
CRX-205ENST00000602001 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
CRX-205ENST00000602001 CC2D2AQ9P2K1 1620 aa24.79■■□□□ 1.56
CRX-205ENST00000602001 SHROOM4Q9ULL8 1493 aa24.75■■□□□ 1.55
CRX-205ENST00000602001 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
CRX-205ENST00000602001 CECR2Q9BXF3 1484 aa24.68■■□□□ 1.54
CRX-205ENST00000602001 ATAD2BQ9ULI0 1458 aa23.89■■□□□ 1.42
CRX-205ENST00000602001 SMARCA4P51532 1647 aa23.89■■□□□ 1.42
CRX-205ENST00000602001 NCAPD3P42695 1498 aa23.88■■□□□ 1.41
CRX-205ENST00000602001 NESP48681 1621 aa23.71■■□□□ 1.39
CRX-205ENST00000602001 SMARCA2P51531 1590 aa23.71■■□□□ 1.39
CRX-205ENST00000602001 MROH2BQ7Z745 1585 aa23.7■■□□□ 1.38
CRX-205ENST00000602001 BAZ1AQ9NRL2 1556 aaPredicted RBP23.69■■□□□ 1.38
CRX-205ENST00000602001 HMGXB3Q12766 1538 aa23.69■■□□□ 1.38
CRX-205ENST00000602001 BAZ1BQ9UIG0 1483 aaKnown RBP23.63■■□□□ 1.37
CRX-205ENST00000602001 ERCC6Q03468 1493 aa23.61■■□□□ 1.37
CRX-205ENST00000602001 PEG3Q9GZU2 1588 aa23.57■■□□□ 1.36
CRX-205ENST00000602001 DNAJC5Q9H3Z4 198 aa23.47■■□□□ 1.35
CRX-205ENST00000602001 CUX2O14529 1486 aa23.45■■□□□ 1.34
CRX-205ENST00000602001 WIZO95785 1651 aa23.44■■□□□ 1.34
CRX-205ENST00000602001 THOC2Q8NI27 1593 aaKnown RBP23.34■■□□□ 1.33
CRX-205ENST00000602001 KIF21AQ7Z4S6 1674 aa23.32■■□□□ 1.32
CRX-205ENST00000602001 LAMC3Q9Y6N6 1575 aa23.3■■□□□ 1.32
CRX-205ENST00000602001 RSF1Q96T23 1441 aaPredicted RBP23.19■■□□□ 1.3
CRX-205ENST00000602001 CADPSQ9ULU8 1353 aa23.18■■□□□ 1.3
CRX-205ENST00000602001 PDS5BQ9NTI5 1447 aa23.14■■□□□ 1.29
CRX-205ENST00000602001 MRC2Q9UBG0 1479 aa23.02■■□□□ 1.28
CRX-205ENST00000602001 TOP2AP11388 1531 aaKnown RBP23.02■■□□□ 1.28
CRX-205ENST00000602001 WDR62O43379 1518 aa22.97■■□□□ 1.27
CRX-205ENST00000602001 FANCD2Q9BXW9 1451 aa22.96■■□□□ 1.27
CRX-205ENST00000602001 CFTRP13569 1480 aa22.93■■□□□ 1.26
CRX-205ENST00000602001 CEP164Q9UPV0 1460 aa22.93■■□□□ 1.26
CRX-205ENST00000602001 URB2Q14146 1524 aaKnown RBP22.84■■□□□ 1.25
CRX-205ENST00000602001 CCDC88BA6NC98 1476 aa22.83■■□□□ 1.25
CRX-205ENST00000602001 PRDM2Q13029 1718 aa22.68■■□□□ 1.22
CRX-205ENST00000602001 ZNF608Q9ULD9 1512 aaPredicted RBP22.6■■□□□ 1.21
CRX-205ENST00000602001 TRIM41Q8WV44 630 aa22.59■■□□□ 1.21
CRX-205ENST00000602001 TOPBP1Q92547 1522 aa22.56■■□□□ 1.2
CRX-205ENST00000602001 OSCARQ8IYS5 282 aa22.44■■□□□ 1.18
CRX-205ENST00000602001 IFT140Q96RY7 1462 aa22.44■■□□□ 1.18
CRX-205ENST00000602001 DNMBPQ6XZF7 1577 aa22.42■■□□□ 1.18
CRX-205ENST00000602001 EIF4G3O43432 1585 aaKnown RBP22.39■■□□□ 1.18
CRX-205ENST00000602001 AQRO60306 1485 aaKnown RBP eCLIP22.37■■□□□ 1.17
CRX-205ENST00000602001 TARBP1Q13395 1621 aaKnown RBP22.35■■□□□ 1.17
CRX-205ENST00000602001 RAD54L2Q9Y4B4 1467 aa22.35■■□□□ 1.17
CRX-205ENST00000602001 POLA1P09884 1462 aaPredicted RBP22.34■■□□□ 1.17
CRX-205ENST00000602001 SUPT5HO00267 1087 aaKnown RBP22.31■■□□□ 1.16
CRX-205ENST00000602001 ABCC8Q09428 1581 aa22.29■■□□□ 1.16
CRX-205ENST00000602001 RIMBP3CA6NJZ7 1639 aa22.26■■□□□ 1.15
CRX-205ENST00000602001 RIMBP3BA6NNM3 1639 aa22.26■■□□□ 1.15
CRX-205ENST00000602001 RIMBP3Q9UFD9 1639 aa22.26■■□□□ 1.15
CRX-205ENST00000602001 CUX1P39880 1505 aa22.25■■□□□ 1.15
CRX-205ENST00000602001 TDRD9Q8NDG6 1382 aaKnown RBP22.25■■□□□ 1.15
CRX-205ENST00000602001 CHD1O14646 1710 aa22.23■■□□□ 1.15
CRX-205ENST00000602001 FGD5Q6ZNL6 1462 aa22.22■■□□□ 1.15
CRX-205ENST00000602001 SOGA1O94964 1423 aa22.2■■□□□ 1.14
CRX-205ENST00000602001 ARHGEF11O15085 1522 aa22.17■■□□□ 1.14
CRX-205ENST00000602001 FBLN2P98095 1184 aa22.17■■□□□ 1.14
CRX-205ENST00000602001 SNAPC4Q5SXM2 1469 aa22.1■■□□□ 1.13
CRX-205ENST00000602001 WDR97A6NE52 1622 aa22.04■■□□□ 1.12
CRX-205ENST00000602001 CYB5RLQ6IPT4 315 aa22.03■■□□□ 1.12
CRX-205ENST00000602001 ARAP1Q96P48 1450 aa22.01■■□□□ 1.11
CRX-205ENST00000602001 GRIN2BQ13224 1484 aa21.95■■□□□ 1.1
CRX-205ENST00000602001 PBRM1Q86U86 1689 aa21.95■■□□□ 1.1
CRX-205ENST00000602001 CLASP1Q7Z460 1538 aa21.94■■□□□ 1.1
CRX-205ENST00000602001 CHMP7Q8WUX9 453 aaPredicted RBP21.93■■□□□ 1.1
CRX-205ENST00000602001 SYNJ1O43426 1573 aa21.91■■□□□ 1.1
CRX-205ENST00000602001 GAPVD1Q14C86 1478 aa21.91■■□□□ 1.1
CRX-205ENST00000602001 ABCA5Q8WWZ7 1642 aa21.91■■□□□ 1.1
CRX-205ENST00000602001 MAGI1Q96QZ7 1491 aaPredicted RBP21.9■■□□□ 1.1
CRX-205ENST00000602001 ABCA10Q8WWZ4 1543 aa21.9■■□□□ 1.1
CRX-205ENST00000602001 SYNJ2O15056 1496 aa21.88■■□□□ 1.09
CRX-205ENST00000602001 BIVM-ERCC5R4GMW8 1640 aa21.82■■□□□ 1.08
CRX-205ENST00000602001 WRNQ14191 1432 aaPredicted RBP eCLIP21.81■■□□□ 1.08
CRX-205ENST00000602001 TOP2BQ02880 1626 aa21.81■■□□□ 1.08
CRX-205ENST00000602001 ERCC6L2Q5T890 1561 aa21.77■■□□□ 1.08
CRX-205ENST00000602001 ADAMTS12P58397 1594 aa21.74■■□□□ 1.07
CRX-205ENST00000602001 TRHP20396 242 aaPredicted RBP21.73■■□□□ 1.07
CRX-205ENST00000602001 CEP170Q5SW79 1584 aa21.72■■□□□ 1.07
CRX-205ENST00000602001 GRIN2AQ12879 1464 aa21.71■■□□□ 1.07
CRX-205ENST00000602001 NUP160Q12769 1436 aa21.63■■□□□ 1.05
CRX-205ENST00000602001 FHAD1B1AJZ9 1412 aa21.61■■□□□ 1.05
CRX-205ENST00000602001 ERICH3Q5RHP9 1530 aa21.57■■□□□ 1.04
CRX-205ENST00000602001 SHROOM2Q13796 1616 aa21.53■■□□□ 1.04
CRX-205ENST00000602001 PRG4Q92954 1404 aaPredicted RBP21.45■■□□□ 1.02
CRX-205ENST00000602001 RUSC2Q8N2Y8 1516 aa21.44■■□□□ 1.02
CRX-205ENST00000602001 IGF1RP08069 1367 aa21.42■■□□□ 1.02
CRX-205ENST00000602001 JPH4Q96JJ6 628 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms