RNA–Protein interactions for RNA: ENST00000601925.5

SMG9-212, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG9, Length 550 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-212ENST00000601925 NISCHQ9Y2I1 1504 aa32.71■■■□□ 2.83
SMG9-212ENST00000601925 CCDC180Q9P1Z9 1646 aa29.29■■■□□ 2.28
SMG9-212ENST00000601925 ABCC9O60706 1549 aa29.25■■■□□ 2.27
SMG9-212ENST00000601925 RB1CC1Q8TDY2 1594 aa27.85■■■□□ 2.05
SMG9-212ENST00000601925 NACADO15069 1562 aa27.69■■■□□ 2.02
SMG9-212ENST00000601925 DCAF8L2P0C7V8 631 aa27.52■■■□□ 2
SMG9-212ENST00000601925 DNAJC5BQ9UF47 199 aa27.48■■□□□ 1.99
SMG9-212ENST00000601925 MYO15BQ96JP2 1530 aa27.36■■□□□ 1.97
SMG9-212ENST00000601925 PABPN1Q86U42 306 aaKnown RBP eCLIP27.26■■□□□ 1.95
SMG9-212ENST00000601925 UNC13AQ9UPW8 1703 aa27.25■■□□□ 1.95
SMG9-212ENST00000601925 ZCCHC6Q5VYS8 1495 aaKnown RBP27.12■■□□□ 1.93
SMG9-212ENST00000601925 BICRAQ9NZM4 1560 aa27.1■■□□□ 1.93
SMG9-212ENST00000601925 DCAF1Q9Y4B6 1507 aa27.03■■□□□ 1.92
SMG9-212ENST00000601925 SHROOM4Q9ULL8 1493 aa26.69■■□□□ 1.86
SMG9-212ENST00000601925 SCRIBQ14160 1630 aa26.68■■□□□ 1.86
SMG9-212ENST00000601925 CC2D2AQ9P2K1 1620 aa26.43■■□□□ 1.82
SMG9-212ENST00000601925 EIF4G1Q04637 1599 aaKnown RBP26.4■■□□□ 1.82
SMG9-212ENST00000601925 CECR2Q9BXF3 1484 aa26.35■■□□□ 1.81
SMG9-212ENST00000601925 DNAJC5Q9H3Z4 198 aa26.11■■□□□ 1.77
SMG9-212ENST00000601925 NCAPD3P42695 1498 aa25.6■■□□□ 1.69
SMG9-212ENST00000601925 ATAD2BQ9ULI0 1458 aa25.53■■□□□ 1.68
SMG9-212ENST00000601925 SMARCA4P51532 1647 aa25.48■■□□□ 1.67
SMG9-212ENST00000601925 SMARCA2P51531 1590 aa25.41■■□□□ 1.66
SMG9-212ENST00000601925 HMGXB3Q12766 1538 aa25.38■■□□□ 1.65
SMG9-212ENST00000601925 BAZ1AQ9NRL2 1556 aaPredicted RBP25.35■■□□□ 1.65
SMG9-212ENST00000601925 PEG3Q9GZU2 1588 aa25.27■■□□□ 1.64
SMG9-212ENST00000601925 BAZ1BQ9UIG0 1483 aaKnown RBP25.23■■□□□ 1.63
SMG9-212ENST00000601925 MROH2BQ7Z745 1585 aa25.21■■□□□ 1.63
SMG9-212ENST00000601925 ERCC6Q03468 1493 aa25.21■■□□□ 1.63
SMG9-212ENST00000601925 CUX2O14529 1486 aa25.19■■□□□ 1.62
SMG9-212ENST00000601925 NESP48681 1621 aa25.16■■□□□ 1.62
SMG9-212ENST00000601925 LAMC3Q9Y6N6 1575 aa24.97■■□□□ 1.59
SMG9-212ENST00000601925 THOC2Q8NI27 1593 aaKnown RBP24.89■■□□□ 1.58
SMG9-212ENST00000601925 WIZO95785 1651 aa24.89■■□□□ 1.58
SMG9-212ENST00000601925 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
SMG9-212ENST00000601925 KIF21AQ7Z4S6 1674 aa24.81■■□□□ 1.56
SMG9-212ENST00000601925 CADPSQ9ULU8 1353 aa24.81■■□□□ 1.56
SMG9-212ENST00000601925 RSF1Q96T23 1441 aaPredicted RBP24.71■■□□□ 1.55
SMG9-212ENST00000601925 MRC2Q9UBG0 1479 aa24.6■■□□□ 1.53
SMG9-212ENST00000601925 WDR62O43379 1518 aa24.56■■□□□ 1.52
SMG9-212ENST00000601925 TOP2AP11388 1531 aaKnown RBP24.56■■□□□ 1.52
SMG9-212ENST00000601925 CFTRP13569 1480 aa24.55■■□□□ 1.52
SMG9-212ENST00000601925 CEP164Q9UPV0 1460 aa24.51■■□□□ 1.51
SMG9-212ENST00000601925 FANCD2Q9BXW9 1451 aa24.51■■□□□ 1.51
SMG9-212ENST00000601925 URB2Q14146 1524 aaKnown RBP24.33■■□□□ 1.49
SMG9-212ENST00000601925 CCDC88BA6NC98 1476 aa24.32■■□□□ 1.48
SMG9-212ENST00000601925 PRDM2Q13029 1718 aa24.25■■□□□ 1.47
SMG9-212ENST00000601925 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
SMG9-212ENST00000601925 TOPBP1Q92547 1522 aa24.06■■□□□ 1.44
SMG9-212ENST00000601925 OSCARQ8IYS5 282 aa24.05■■□□□ 1.44
SMG9-212ENST00000601925 IFT140Q96RY7 1462 aa24.03■■□□□ 1.44
SMG9-212ENST00000601925 ZNF608Q9ULD9 1512 aaPredicted RBP24.02■■□□□ 1.44
SMG9-212ENST00000601925 ABCC8Q09428 1581 aa23.99■■□□□ 1.43
SMG9-212ENST00000601925 SUPT5HO00267 1087 aaKnown RBP23.97■■□□□ 1.43
SMG9-212ENST00000601925 DNMBPQ6XZF7 1577 aa23.96■■□□□ 1.43
SMG9-212ENST00000601925 TARBP1Q13395 1621 aaKnown RBP23.86■■□□□ 1.41
SMG9-212ENST00000601925 EIF4G3O43432 1585 aaKnown RBP23.85■■□□□ 1.41
SMG9-212ENST00000601925 POLA1P09884 1462 aaPredicted RBP23.82■■□□□ 1.4
SMG9-212ENST00000601925 AQRO60306 1485 aaKnown RBP eCLIP23.81■■□□□ 1.4
SMG9-212ENST00000601925 RAD54L2Q9Y4B4 1467 aa23.74■■□□□ 1.39
SMG9-212ENST00000601925 RIMBP3CA6NJZ7 1639 aa23.73■■□□□ 1.39
SMG9-212ENST00000601925 RIMBP3BA6NNM3 1639 aa23.73■■□□□ 1.39
SMG9-212ENST00000601925 RIMBP3Q9UFD9 1639 aa23.73■■□□□ 1.39
SMG9-212ENST00000601925 SOGA1O94964 1423 aa23.71■■□□□ 1.39
SMG9-212ENST00000601925 CUX1P39880 1505 aa23.68■■□□□ 1.38
SMG9-212ENST00000601925 ARHGEF11O15085 1522 aa23.67■■□□□ 1.38
SMG9-212ENST00000601925 FGD5Q6ZNL6 1462 aa23.67■■□□□ 1.38
SMG9-212ENST00000601925 TDRD9Q8NDG6 1382 aaKnown RBP23.66■■□□□ 1.38
SMG9-212ENST00000601925 CHD1O14646 1710 aa23.66■■□□□ 1.38
SMG9-212ENST00000601925 FBLN2P98095 1184 aa23.58■■□□□ 1.37
SMG9-212ENST00000601925 WDR97A6NE52 1622 aa23.58■■□□□ 1.36
SMG9-212ENST00000601925 SNAPC4Q5SXM2 1469 aa23.54■■□□□ 1.36
SMG9-212ENST00000601925 CYB5RLQ6IPT4 315 aa23.49■■□□□ 1.35
SMG9-212ENST00000601925 GRIN2BQ13224 1484 aa23.49■■□□□ 1.35
SMG9-212ENST00000601925 MAGI1Q96QZ7 1491 aaPredicted RBP23.48■■□□□ 1.35
SMG9-212ENST00000601925 ARAP1Q96P48 1450 aa23.45■■□□□ 1.34
SMG9-212ENST00000601925 CHMP7Q8WUX9 453 aaPredicted RBP23.43■■□□□ 1.34
SMG9-212ENST00000601925 CLASP1Q7Z460 1538 aa23.43■■□□□ 1.34
SMG9-212ENST00000601925 ABCA10Q8WWZ4 1543 aa23.42■■□□□ 1.34
SMG9-212ENST00000601925 GAPVD1Q14C86 1478 aa23.42■■□□□ 1.34
SMG9-212ENST00000601925 SYNJ2O15056 1496 aa23.4■■□□□ 1.34
SMG9-212ENST00000601925 PBRM1Q86U86 1689 aa23.38■■□□□ 1.33
SMG9-212ENST00000601925 ABCA5Q8WWZ7 1642 aa23.37■■□□□ 1.33
SMG9-212ENST00000601925 SYNJ1O43426 1573 aa23.36■■□□□ 1.33
SMG9-212ENST00000601925 WRNQ14191 1432 aaPredicted RBP eCLIP23.31■■□□□ 1.32
SMG9-212ENST00000601925 TOP2BQ02880 1626 aa23.3■■□□□ 1.32
SMG9-212ENST00000601925 BIVM-ERCC5R4GMW8 1640 aa23.3■■□□□ 1.32
SMG9-212ENST00000601925 AEBP2Q6ZN18 517 aaPredicted RBP23.22■■□□□ 1.31
SMG9-212ENST00000601925 GRIN2AQ12879 1464 aa23.18■■□□□ 1.3
SMG9-212ENST00000601925 ADAMTS12P58397 1594 aa23.17■■□□□ 1.3
SMG9-212ENST00000601925 TRHP20396 242 aaPredicted RBP23.15■■□□□ 1.3
SMG9-212ENST00000601925 NUP160Q12769 1436 aa23.14■■□□□ 1.29
SMG9-212ENST00000601925 FHAD1B1AJZ9 1412 aa23.12■■□□□ 1.29
SMG9-212ENST00000601925 ERICH3Q5RHP9 1530 aa23.11■■□□□ 1.29
SMG9-212ENST00000601925 CEP170Q5SW79 1584 aa23.1■■□□□ 1.29
SMG9-212ENST00000601925 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
SMG9-212ENST00000601925 SHROOM2Q13796 1616 aa23.01■■□□□ 1.27
SMG9-212ENST00000601925 JPH4Q96JJ6 628 aa22.9■■□□□ 1.26
SMG9-212ENST00000601925 PRG4Q92954 1404 aaPredicted RBP22.88■■□□□ 1.25
SMG9-212ENST00000601925 IGF1RP08069 1367 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms