RNA–Protein interactions for RNA: ENST00000601881.1

SIPA1L3-212, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 2

Gene SIPA1L3, Length 568 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-212ENST00000601881 NISCHQ9Y2I1 1504 aa37.99■■■■□ 3.67
SIPA1L3-212ENST00000601881 CCDC180Q9P1Z9 1646 aa33.73■■■□□ 2.99
SIPA1L3-212ENST00000601881 ABCC9O60706 1549 aa33.33■■■□□ 2.93
SIPA1L3-212ENST00000601881 DCAF8L2P0C7V8 631 aa31.94■■■□□ 2.7
SIPA1L3-212ENST00000601881 RB1CC1Q8TDY2 1594 aa31.87■■■□□ 2.69
SIPA1L3-212ENST00000601881 NACADO15069 1562 aa31.79■■■□□ 2.68
SIPA1L3-212ENST00000601881 ZCCHC6Q5VYS8 1495 aaKnown RBP31.61■■■□□ 2.65
SIPA1L3-212ENST00000601881 MYO15BQ96JP2 1530 aa31.5■■■□□ 2.63
SIPA1L3-212ENST00000601881 DCAF1Q9Y4B6 1507 aa31.34■■■□□ 2.61
SIPA1L3-212ENST00000601881 PABPN1Q86U42 306 aaKnown RBP eCLIP31.18■■■□□ 2.58
SIPA1L3-212ENST00000601881 UNC13AQ9UPW8 1703 aa31.12■■■□□ 2.57
SIPA1L3-212ENST00000601881 BICRAQ9NZM4 1560 aa30.96■■■□□ 2.55
SIPA1L3-212ENST00000601881 SCRIBQ14160 1630 aa30.92■■■□□ 2.54
SIPA1L3-212ENST00000601881 DNAJC5BQ9UF47 199 aa30.76■■■□□ 2.51
SIPA1L3-212ENST00000601881 SHROOM4Q9ULL8 1493 aa30.5■■■□□ 2.47
SIPA1L3-212ENST00000601881 EIF4G1Q04637 1599 aaKnown RBP30.15■■■□□ 2.42
SIPA1L3-212ENST00000601881 CC2D2AQ9P2K1 1620 aa30.07■■■□□ 2.4
SIPA1L3-212ENST00000601881 CECR2Q9BXF3 1484 aa29.92■■■□□ 2.38
SIPA1L3-212ENST00000601881 SMARCA4P51532 1647 aa29.49■■■□□ 2.31
SIPA1L3-212ENST00000601881 BAZ1AQ9NRL2 1556 aaPredicted RBP29.42■■■□□ 2.3
SIPA1L3-212ENST00000601881 ATAD2BQ9ULI0 1458 aa29.4■■■□□ 2.3
SIPA1L3-212ENST00000601881 NCAPD3P42695 1498 aa29.36■■■□□ 2.29
SIPA1L3-212ENST00000601881 MROH2BQ7Z745 1585 aa29.32■■■□□ 2.28
SIPA1L3-212ENST00000601881 SMARCA2P51531 1590 aa29.3■■■□□ 2.28
SIPA1L3-212ENST00000601881 HMGXB3Q12766 1538 aa29.18■■■□□ 2.26
SIPA1L3-212ENST00000601881 PEG3Q9GZU2 1588 aa29.15■■■□□ 2.26
SIPA1L3-212ENST00000601881 BAZ1BQ9UIG0 1483 aaKnown RBP29.15■■■□□ 2.26
SIPA1L3-212ENST00000601881 WIZO95785 1651 aa28.98■■■□□ 2.23
SIPA1L3-212ENST00000601881 RSF1Q96T23 1441 aaPredicted RBP28.94■■■□□ 2.22
SIPA1L3-212ENST00000601881 NESP48681 1621 aa28.8■■■□□ 2.2
SIPA1L3-212ENST00000601881 ERCC6Q03468 1493 aa28.7■■■□□ 2.18
SIPA1L3-212ENST00000601881 TOP2AP11388 1531 aaKnown RBP28.64■■■□□ 2.17
SIPA1L3-212ENST00000601881 LAMC3Q9Y6N6 1575 aa28.58■■■□□ 2.17
SIPA1L3-212ENST00000601881 CADPSQ9ULU8 1353 aa28.53■■■□□ 2.16
SIPA1L3-212ENST00000601881 PDS5BQ9NTI5 1447 aa28.43■■■□□ 2.14
SIPA1L3-212ENST00000601881 CUX2O14529 1486 aa28.37■■■□□ 2.13
SIPA1L3-212ENST00000601881 KIF21AQ7Z4S6 1674 aa28.37■■■□□ 2.13
SIPA1L3-212ENST00000601881 CCDC88BA6NC98 1476 aa28.34■■■□□ 2.13
SIPA1L3-212ENST00000601881 CFTRP13569 1480 aa28.32■■■□□ 2.12
SIPA1L3-212ENST00000601881 THOC2Q8NI27 1593 aaKnown RBP28.31■■■□□ 2.12
SIPA1L3-212ENST00000601881 FANCD2Q9BXW9 1451 aa28.22■■■□□ 2.11
SIPA1L3-212ENST00000601881 SUPT5HO00267 1087 aaKnown RBP28.2■■■□□ 2.1
SIPA1L3-212ENST00000601881 CEP164Q9UPV0 1460 aa28.18■■■□□ 2.1
SIPA1L3-212ENST00000601881 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
SIPA1L3-212ENST00000601881 WDR62O43379 1518 aa28.06■■■□□ 2.08
SIPA1L3-212ENST00000601881 PRDM2Q13029 1718 aa27.98■■■□□ 2.07
SIPA1L3-212ENST00000601881 URB2Q14146 1524 aaKnown RBP27.97■■■□□ 2.07
SIPA1L3-212ENST00000601881 TOPBP1Q92547 1522 aa27.75■■■□□ 2.03
SIPA1L3-212ENST00000601881 DNAJC5Q9H3Z4 198 aa27.72■■■□□ 2.03
SIPA1L3-212ENST00000601881 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
SIPA1L3-212ENST00000601881 ABCC8Q09428 1581 aa27.65■■■□□ 2.02
SIPA1L3-212ENST00000601881 IFT140Q96RY7 1462 aa27.58■■■□□ 2.01
SIPA1L3-212ENST00000601881 ZNF608Q9ULD9 1512 aaPredicted RBP27.55■■■□□ 2
SIPA1L3-212ENST00000601881 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
SIPA1L3-212ENST00000601881 CUX1P39880 1505 aa27.51■■□□□ 1.99
SIPA1L3-212ENST00000601881 RAD54L2Q9Y4B4 1467 aa27.44■■□□□ 1.98
SIPA1L3-212ENST00000601881 FGD5Q6ZNL6 1462 aa27.44■■□□□ 1.98
SIPA1L3-212ENST00000601881 TARBP1Q13395 1621 aaKnown RBP27.43■■□□□ 1.98
SIPA1L3-212ENST00000601881 SOGA1O94964 1423 aa27.41■■□□□ 1.98
SIPA1L3-212ENST00000601881 AQRO60306 1485 aaKnown RBP eCLIP27.38■■□□□ 1.97
SIPA1L3-212ENST00000601881 EIF4G3O43432 1585 aaKnown RBP27.37■■□□□ 1.97
SIPA1L3-212ENST00000601881 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
SIPA1L3-212ENST00000601881 WRNQ14191 1432 aaPredicted RBP eCLIP27.27■■□□□ 1.96
SIPA1L3-212ENST00000601881 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
SIPA1L3-212ENST00000601881 SYNJ1O43426 1573 aa27.22■■□□□ 1.95
SIPA1L3-212ENST00000601881 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
SIPA1L3-212ENST00000601881 BIVM-ERCC5R4GMW8 1640 aa27.16■■□□□ 1.94
SIPA1L3-212ENST00000601881 WDR97A6NE52 1622 aa27.14■■□□□ 1.94
SIPA1L3-212ENST00000601881 ABCA10Q8WWZ4 1543 aa27.12■■□□□ 1.93
SIPA1L3-212ENST00000601881 FBLN2P98095 1184 aa27.11■■□□□ 1.93
SIPA1L3-212ENST00000601881 SNAPC4Q5SXM2 1469 aa27.1■■□□□ 1.93
SIPA1L3-212ENST00000601881 GRIN2BQ13224 1484 aa27.07■■□□□ 1.92
SIPA1L3-212ENST00000601881 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
SIPA1L3-212ENST00000601881 CHD1O14646 1710 aa27.03■■□□□ 1.92
SIPA1L3-212ENST00000601881 ABCA5Q8WWZ7 1642 aa27.01■■□□□ 1.92
SIPA1L3-212ENST00000601881 MAGI1Q96QZ7 1491 aaPredicted RBP26.99■■□□□ 1.91
SIPA1L3-212ENST00000601881 PBRM1Q86U86 1689 aa26.97■■□□□ 1.91
SIPA1L3-212ENST00000601881 CHMP7Q8WUX9 453 aaPredicted RBP26.96■■□□□ 1.91
SIPA1L3-212ENST00000601881 SYNJ2O15056 1496 aa26.91■■□□□ 1.9
SIPA1L3-212ENST00000601881 TRIM41Q8WV44 630 aa26.86■■□□□ 1.89
SIPA1L3-212ENST00000601881 RIMBP3CA6NJZ7 1639 aa26.79■■□□□ 1.88
SIPA1L3-212ENST00000601881 RIMBP3BA6NNM3 1639 aa26.79■■□□□ 1.88
SIPA1L3-212ENST00000601881 RIMBP3Q9UFD9 1639 aa26.79■■□□□ 1.88
SIPA1L3-212ENST00000601881 ARHGEF11O15085 1522 aa26.79■■□□□ 1.88
SIPA1L3-212ENST00000601881 ADAMTS12P58397 1594 aa26.79■■□□□ 1.88
SIPA1L3-212ENST00000601881 ERICH3Q5RHP9 1530 aa26.77■■□□□ 1.88
SIPA1L3-212ENST00000601881 CLASP1Q7Z460 1538 aa26.75■■□□□ 1.87
SIPA1L3-212ENST00000601881 FHAD1B1AJZ9 1412 aa26.74■■□□□ 1.87
SIPA1L3-212ENST00000601881 GRIN2AQ12879 1464 aa26.73■■□□□ 1.87
SIPA1L3-212ENST00000601881 KIF27Q86VH2 1401 aa26.7■■□□□ 1.86
SIPA1L3-212ENST00000601881 IGF1RP08069 1367 aa26.64■■□□□ 1.86
SIPA1L3-212ENST00000601881 CEP170Q5SW79 1584 aa26.62■■□□□ 1.85
SIPA1L3-212ENST00000601881 CYB5RLQ6IPT4 315 aa26.61■■□□□ 1.85
SIPA1L3-212ENST00000601881 NUP160Q12769 1436 aa26.61■■□□□ 1.85
SIPA1L3-212ENST00000601881 ARAP1Q96P48 1450 aa26.59■■□□□ 1.85
SIPA1L3-212ENST00000601881 RUSC2Q8N2Y8 1516 aa26.5■■□□□ 1.83
SIPA1L3-212ENST00000601881 CUL7Q14999 1698 aa26.47■■□□□ 1.83
SIPA1L3-212ENST00000601881 CARMIL1Q5VZK9 1371 aa26.47■■□□□ 1.83
SIPA1L3-212ENST00000601881 ERCC6L2Q5T890 1561 aa26.45■■□□□ 1.82
SIPA1L3-212ENST00000601881 SHROOM2Q13796 1616 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms