RNA–Protein interactions for RNA: ENST00000601772.1

DDX49-211, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 342 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-211ENST00000601772 NISCHQ9Y2I1 1504 aa20.7■□□□□ 0.9
DDX49-211ENST00000601772 ABCC9O60706 1549 aa19.82■□□□□ 0.76
DDX49-211ENST00000601772 DNAJC5BQ9UF47 199 aa19.31■□□□□ 0.68
DDX49-211ENST00000601772 CCDC180Q9P1Z9 1646 aa18.86■□□□□ 0.61
DDX49-211ENST00000601772 RB1CC1Q8TDY2 1594 aa18.42■□□□□ 0.54
DDX49-211ENST00000601772 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
DDX49-211ENST00000601772 PABPN1Q86U42 306 aaKnown RBP eCLIP18.32■□□□□ 0.52
DDX49-211ENST00000601772 NACADO15069 1562 aa18.03■□□□□ 0.48
DDX49-211ENST00000601772 UNC13AQ9UPW8 1703 aa18■□□□□ 0.47
DDX49-211ENST00000601772 DCAF8L2P0C7V8 631 aa17.92■□□□□ 0.46
DDX49-211ENST00000601772 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
DDX49-211ENST00000601772 BICRAQ9NZM4 1560 aa17.88■□□□□ 0.45
DDX49-211ENST00000601772 CC2D2AQ9P2K1 1620 aa17.82■□□□□ 0.44
DDX49-211ENST00000601772 EIF4G1Q04637 1599 aaKnown RBP17.55■□□□□ 0.4
DDX49-211ENST00000601772 SHROOM4Q9ULL8 1493 aa17.5■□□□□ 0.39
DDX49-211ENST00000601772 MYO15BQ96JP2 1530 aa17.42■□□□□ 0.38
DDX49-211ENST00000601772 CUX2O14529 1486 aa17.37■□□□□ 0.37
DDX49-211ENST00000601772 TRIM41Q8WV44 630 aa17.34■□□□□ 0.37
DDX49-211ENST00000601772 SCRIBQ14160 1630 aa17.25■□□□□ 0.35
DDX49-211ENST00000601772 ZCCHC6Q5VYS8 1495 aaKnown RBP17.24■□□□□ 0.35
DDX49-211ENST00000601772 ERCC6Q03468 1493 aa17.2■□□□□ 0.34
DDX49-211ENST00000601772 DCAF1Q9Y4B6 1507 aa17.12■□□□□ 0.33
DDX49-211ENST00000601772 NESP48681 1621 aa16.77■□□□□ 0.27
DDX49-211ENST00000601772 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
DDX49-211ENST00000601772 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
DDX49-211ENST00000601772 NCAPD3P42695 1498 aa16.64■□□□□ 0.25
DDX49-211ENST00000601772 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
DDX49-211ENST00000601772 KIF21AQ7Z4S6 1674 aa16.51■□□□□ 0.23
DDX49-211ENST00000601772 BAZ1AQ9NRL2 1556 aaPredicted RBP16.51■□□□□ 0.23
DDX49-211ENST00000601772 ATAD2BQ9ULI0 1458 aa16.5■□□□□ 0.23
DDX49-211ENST00000601772 HMGXB3Q12766 1538 aa16.47■□□□□ 0.23
DDX49-211ENST00000601772 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
DDX49-211ENST00000601772 LAMC3Q9Y6N6 1575 aa16.44■□□□□ 0.22
DDX49-211ENST00000601772 PDS5BQ9NTI5 1447 aa16.39■□□□□ 0.21
DDX49-211ENST00000601772 RIMBP3CA6NJZ7 1639 aa16.37■□□□□ 0.21
DDX49-211ENST00000601772 RIMBP3BA6NNM3 1639 aa16.37■□□□□ 0.21
DDX49-211ENST00000601772 RIMBP3Q9UFD9 1639 aa16.37■□□□□ 0.21
DDX49-211ENST00000601772 BAZ1BQ9UIG0 1483 aaKnown RBP16.35■□□□□ 0.21
DDX49-211ENST00000601772 TRHP20396 242 aaPredicted RBP16.34■□□□□ 0.21
DDX49-211ENST00000601772 MRC2Q9UBG0 1479 aa16.33■□□□□ 0.2
DDX49-211ENST00000601772 SMARCA4P51532 1647 aa16.29■□□□□ 0.2
DDX49-211ENST00000601772 WDR62O43379 1518 aa16.29■□□□□ 0.2
DDX49-211ENST00000601772 ARHGEF11O15085 1522 aa16.21■□□□□ 0.19
DDX49-211ENST00000601772 CYB5RLQ6IPT4 315 aa16.17■□□□□ 0.18
DDX49-211ENST00000601772 CADPSQ9ULU8 1353 aa16.13■□□□□ 0.17
DDX49-211ENST00000601772 CEP164Q9UPV0 1460 aa16.1■□□□□ 0.17
DDX49-211ENST00000601772 PEG3Q9GZU2 1588 aa16.06■□□□□ 0.16
DDX49-211ENST00000601772 ARAP1Q96P48 1450 aa16■□□□□ 0.15
DDX49-211ENST00000601772 FANCD2Q9BXW9 1451 aa15.99■□□□□ 0.15
DDX49-211ENST00000601772 MROH2BQ7Z745 1585 aa15.96■□□□□ 0.15
DDX49-211ENST00000601772 ILDR1Q86SU0 546 aaPredicted RBP15.92■□□□□ 0.14
DDX49-211ENST00000601772 URB2Q14146 1524 aaKnown RBP15.91■□□□□ 0.14
DDX49-211ENST00000601772 ZNF608Q9ULD9 1512 aaPredicted RBP15.88■□□□□ 0.13
DDX49-211ENST00000601772 WIZO95785 1651 aa15.84■□□□□ 0.13
DDX49-211ENST00000601772 CHD1O14646 1710 aa15.81■□□□□ 0.12
DDX49-211ENST00000601772 IFT140Q96RY7 1462 aa15.78■□□□□ 0.12
DDX49-211ENST00000601772 RSF1Q96T23 1441 aaPredicted RBP15.78■□□□□ 0.12
DDX49-211ENST00000601772 FBLN2P98095 1184 aa15.77■□□□□ 0.12
DDX49-211ENST00000601772 EIF4G3O43432 1585 aaKnown RBP15.75■□□□□ 0.11
DDX49-211ENST00000601772 CFTRP13569 1480 aa15.74■□□□□ 0.11
DDX49-211ENST00000601772 TOP2AP11388 1531 aaKnown RBP15.63■□□□□ 0.09
DDX49-211ENST00000601772 AQRO60306 1485 aaKnown RBP eCLIP15.62■□□□□ 0.09
DDX49-211ENST00000601772 TOPBP1Q92547 1522 aa15.58■□□□□ 0.08
DDX49-211ENST00000601772 CLASP1Q7Z460 1538 aa15.55■□□□□ 0.08
DDX49-211ENST00000601772 PRDM2Q13029 1718 aa15.54■□□□□ 0.08
DDX49-211ENST00000601772 SYNJ1O43426 1573 aa15.49■□□□□ 0.07
DDX49-211ENST00000601772 GAPVD1Q14C86 1478 aa15.49■□□□□ 0.07
DDX49-211ENST00000601772 TARBP1Q13395 1621 aaKnown RBP15.48■□□□□ 0.07
DDX49-211ENST00000601772 SNAPC4Q5SXM2 1469 aa15.46■□□□□ 0.06
DDX49-211ENST00000601772 CHMP7Q8WUX9 453 aaPredicted RBP15.45■□□□□ 0.06
DDX49-211ENST00000601772 KDM4FA0A1W2PPD8 638 aa15.44■□□□□ 0.06
DDX49-211ENST00000601772 DNMBPQ6XZF7 1577 aa15.44■□□□□ 0.06
DDX49-211ENST00000601772 ABCC8Q09428 1581 aa15.43■□□□□ 0.06
DDX49-211ENST00000601772 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
DDX49-211ENST00000601772 TDRD9Q8NDG6 1382 aaKnown RBP15.39■□□□□ 0.05
DDX49-211ENST00000601772 KIF13AQ9H1H9 1805 aa15.36■□□□□ 0.05
DDX49-211ENST00000601772 POLA1P09884 1462 aaPredicted RBP15.36■□□□□ 0.05
DDX49-211ENST00000601772 RAD54L2Q9Y4B4 1467 aa15.35■□□□□ 0.05
DDX49-211ENST00000601772 MAGI1Q96QZ7 1491 aaPredicted RBP15.32■□□□□ 0.04
DDX49-211ENST00000601772 ERCC6L2Q5T890 1561 aa15.29■□□□□ 0.04
DDX49-211ENST00000601772 SYNJ2O15056 1496 aa15.29■□□□□ 0.04
DDX49-211ENST00000601772 SOGA1O94964 1423 aa15.27■□□□□ 0.04
DDX49-211ENST00000601772 GRIN2BQ13224 1484 aa15.24■□□□□ 0.03
DDX49-211ENST00000601772 KDM6BO15054 1643 aa15.24■□□□□ 0.03
DDX49-211ENST00000601772 HECW2Q9P2P5 1572 aa15.24■□□□□ 0.03
DDX49-211ENST00000601772 SUPT5HO00267 1087 aaKnown RBP15.23■□□□□ 0.03
DDX49-211ENST00000601772 FAM69CQ0P6D2 419 aa15.23■□□□□ 0.03
DDX49-211ENST00000601772 WDR97A6NE52 1622 aa15.22■□□□□ 0.03
DDX49-211ENST00000601772 FBXO41Q8TF61 875 aa15.19■□□□□ 0.02
DDX49-211ENST00000601772 CEP170Q5SW79 1584 aa15.16■□□□□ 0.02
DDX49-211ENST00000601772 FGD5Q6ZNL6 1462 aa15.16■□□□□ 0.02
DDX49-211ENST00000601772 PBRM1Q86U86 1689 aa15.16■□□□□ 0.02
DDX49-211ENST00000601772 ADGRL1O94910 1474 aa15.15■□□□□ 0.02
DDX49-211ENST00000601772 ABCC10Q5T3U5 1492 aa15.14■□□□□ 0.01
DDX49-211ENST00000601772 LMTK3Q96Q04 1460 aa15.13■□□□□ 0.01
DDX49-211ENST00000601772 TSPOAP1O95153 1857 aa15.12■□□□□ 0.01
DDX49-211ENST00000601772 DIP2BQ9P265 1576 aa15.11■□□□□ 0.01
DDX49-211ENST00000601772 NPM1P06748 294 aaKnown RBP eCLIP15.06■□□□□ 0
DDX49-211ENST00000601772 GRIN2AQ12879 1464 aa15.05■□□□□ -0
DDX49-211ENST00000601772 SHROOM2Q13796 1616 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 284.9 ms