RNA–Protein interactions for RNA: ENST00000601719.1

ZNF397-212, Transcript of zinc finger protein 397, humanhuman

TSL 5

Gene ZNF397, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF397-212ENST00000601719 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
ZNF397-212ENST00000601719 ABCC9O60706 1549 aa29.04■■■□□ 2.24
ZNF397-212ENST00000601719 DNAJC5BQ9UF47 199 aa28.2■■■□□ 2.1
ZNF397-212ENST00000601719 CCDC180Q9P1Z9 1646 aa28.09■■■□□ 2.09
ZNF397-212ENST00000601719 RB1CC1Q8TDY2 1594 aa27.22■■□□□ 1.95
ZNF397-212ENST00000601719 PABPN1Q86U42 306 aaKnown RBP eCLIP27.01■■□□□ 1.91
ZNF397-212ENST00000601719 NACADO15069 1562 aa26.88■■□□□ 1.89
ZNF397-212ENST00000601719 DCAF8L2P0C7V8 631 aa26.62■■□□□ 1.85
ZNF397-212ENST00000601719 BICRAQ9NZM4 1560 aa26.52■■□□□ 1.84
ZNF397-212ENST00000601719 DNAJC5Q9H3Z4 198 aa26.49■■□□□ 1.83
ZNF397-212ENST00000601719 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
ZNF397-212ENST00000601719 MYO15BQ96JP2 1530 aa26.33■■□□□ 1.81
ZNF397-212ENST00000601719 CECR2Q9BXF3 1484 aa26.28■■□□□ 1.8
ZNF397-212ENST00000601719 CC2D2AQ9P2K1 1620 aa26.14■■□□□ 1.78
ZNF397-212ENST00000601719 SHROOM4Q9ULL8 1493 aa26.1■■□□□ 1.77
ZNF397-212ENST00000601719 EIF4G1Q04637 1599 aaKnown RBP25.9■■□□□ 1.74
ZNF397-212ENST00000601719 DCAF1Q9Y4B6 1507 aa25.66■■□□□ 1.7
ZNF397-212ENST00000601719 ZCCHC6Q5VYS8 1495 aaKnown RBP25.57■■□□□ 1.68
ZNF397-212ENST00000601719 SCRIBQ14160 1630 aa25.55■■□□□ 1.68
ZNF397-212ENST00000601719 CUX2O14529 1486 aa25.4■■□□□ 1.66
ZNF397-212ENST00000601719 ERCC6Q03468 1493 aa25.09■■□□□ 1.61
ZNF397-212ENST00000601719 NCAPD3P42695 1498 aa24.95■■□□□ 1.58
ZNF397-212ENST00000601719 TRIM41Q8WV44 630 aa24.83■■□□□ 1.57
ZNF397-212ENST00000601719 NESP48681 1621 aa24.72■■□□□ 1.55
ZNF397-212ENST00000601719 ATAD2BQ9ULI0 1458 aa24.7■■□□□ 1.55
ZNF397-212ENST00000601719 HMGXB3Q12766 1538 aa24.56■■□□□ 1.52
ZNF397-212ENST00000601719 THOC2Q8NI27 1593 aaKnown RBP24.54■■□□□ 1.52
ZNF397-212ENST00000601719 SMARCA2P51531 1590 aa24.5■■□□□ 1.51
ZNF397-212ENST00000601719 LAMC3Q9Y6N6 1575 aa24.36■■□□□ 1.49
ZNF397-212ENST00000601719 PDS5BQ9NTI5 1447 aa24.35■■□□□ 1.49
ZNF397-212ENST00000601719 BAZ1BQ9UIG0 1483 aaKnown RBP24.33■■□□□ 1.49
ZNF397-212ENST00000601719 SMARCA4P51532 1647 aa24.33■■□□□ 1.49
ZNF397-212ENST00000601719 OSCARQ8IYS5 282 aa24.2■■□□□ 1.46
ZNF397-212ENST00000601719 PEG3Q9GZU2 1588 aa24.19■■□□□ 1.46
ZNF397-212ENST00000601719 KIF21AQ7Z4S6 1674 aa24.18■■□□□ 1.46
ZNF397-212ENST00000601719 CADPSQ9ULU8 1353 aa24.15■■□□□ 1.46
ZNF397-212ENST00000601719 MRC2Q9UBG0 1479 aa24.13■■□□□ 1.45
ZNF397-212ENST00000601719 BAZ1AQ9NRL2 1556 aaPredicted RBP24.13■■□□□ 1.45
ZNF397-212ENST00000601719 WDR62O43379 1518 aa24.09■■□□□ 1.45
ZNF397-212ENST00000601719 MROH2BQ7Z745 1585 aa23.94■■□□□ 1.42
ZNF397-212ENST00000601719 CEP164Q9UPV0 1460 aa23.84■■□□□ 1.41
ZNF397-212ENST00000601719 FANCD2Q9BXW9 1451 aa23.79■■□□□ 1.4
ZNF397-212ENST00000601719 RIMBP3CA6NJZ7 1639 aa23.77■■□□□ 1.4
ZNF397-212ENST00000601719 RIMBP3BA6NNM3 1639 aa23.77■■□□□ 1.4
ZNF397-212ENST00000601719 RIMBP3Q9UFD9 1639 aa23.77■■□□□ 1.4
ZNF397-212ENST00000601719 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
ZNF397-212ENST00000601719 CYB5RLQ6IPT4 315 aa23.67■■□□□ 1.38
ZNF397-212ENST00000601719 CFTRP13569 1480 aa23.67■■□□□ 1.38
ZNF397-212ENST00000601719 URB2Q14146 1524 aaKnown RBP23.65■■□□□ 1.38
ZNF397-212ENST00000601719 TRHP20396 242 aaPredicted RBP23.6■■□□□ 1.37
ZNF397-212ENST00000601719 ZNF608Q9ULD9 1512 aaPredicted RBP23.51■■□□□ 1.35
ZNF397-212ENST00000601719 AEBP2Q6ZN18 517 aaPredicted RBP23.51■■□□□ 1.35
ZNF397-212ENST00000601719 WIZO95785 1651 aa23.5■■□□□ 1.35
ZNF397-212ENST00000601719 IFT140Q96RY7 1462 aa23.45■■□□□ 1.34
ZNF397-212ENST00000601719 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
ZNF397-212ENST00000601719 RSF1Q96T23 1441 aaPredicted RBP23.32■■□□□ 1.32
ZNF397-212ENST00000601719 TOPBP1Q92547 1522 aa23.23■■□□□ 1.31
ZNF397-212ENST00000601719 AQRO60306 1485 aaKnown RBP eCLIP23.22■■□□□ 1.31
ZNF397-212ENST00000601719 FBLN2P98095 1184 aa23.2■■□□□ 1.3
ZNF397-212ENST00000601719 EIF4G3O43432 1585 aaKnown RBP23.19■■□□□ 1.3
ZNF397-212ENST00000601719 TOP2AP11388 1531 aaKnown RBP23.19■■□□□ 1.3
ZNF397-212ENST00000601719 ABCC8Q09428 1581 aa23.14■■□□□ 1.3
ZNF397-212ENST00000601719 CHD1O14646 1710 aa23.09■■□□□ 1.29
ZNF397-212ENST00000601719 TARBP1Q13395 1621 aaKnown RBP23.05■■□□□ 1.28
ZNF397-212ENST00000601719 CCDC88BA6NC98 1476 aa23.04■■□□□ 1.28
ZNF397-212ENST00000601719 DNMBPQ6XZF7 1577 aa23.01■■□□□ 1.27
ZNF397-212ENST00000601719 PRDM2Q13029 1718 aa23■■□□□ 1.27
ZNF397-212ENST00000601719 CLASP1Q7Z460 1538 aa22.98■■□□□ 1.27
ZNF397-212ENST00000601719 TDRD9Q8NDG6 1382 aaKnown RBP22.96■■□□□ 1.27
ZNF397-212ENST00000601719 POLA1P09884 1462 aaPredicted RBP22.96■■□□□ 1.27
ZNF397-212ENST00000601719 CHMP7Q8WUX9 453 aaPredicted RBP22.94■■□□□ 1.26
ZNF397-212ENST00000601719 RAD54L2Q9Y4B4 1467 aa22.9■■□□□ 1.26
ZNF397-212ENST00000601719 SOGA1O94964 1423 aa22.88■■□□□ 1.25
ZNF397-212ENST00000601719 SNAPC4Q5SXM2 1469 aa22.87■■□□□ 1.25
ZNF397-212ENST00000601719 GAPVD1Q14C86 1478 aa22.84■■□□□ 1.25
ZNF397-212ENST00000601719 SYNJ1O43426 1573 aa22.83■■□□□ 1.25
ZNF397-212ENST00000601719 MAGI1Q96QZ7 1491 aaPredicted RBP22.8■■□□□ 1.24
ZNF397-212ENST00000601719 SYNJ2O15056 1496 aa22.76■■□□□ 1.23
ZNF397-212ENST00000601719 GRIN2BQ13224 1484 aa22.74■■□□□ 1.23
ZNF397-212ENST00000601719 WDR97A6NE52 1622 aa22.73■■□□□ 1.23
ZNF397-212ENST00000601719 ILDR1Q86SU0 546 aaPredicted RBP22.69■■□□□ 1.22
ZNF397-212ENST00000601719 FGD5Q6ZNL6 1462 aa22.66■■□□□ 1.22
ZNF397-212ENST00000601719 ERCC6L2Q5T890 1561 aa22.56■■□□□ 1.2
ZNF397-212ENST00000601719 KDM4FA0A1W2PPD8 638 aa22.55■■□□□ 1.2
ZNF397-212ENST00000601719 CUX1P39880 1505 aa22.52■■□□□ 1.2
ZNF397-212ENST00000601719 NUP160Q12769 1436 aa22.44■■□□□ 1.18
ZNF397-212ENST00000601719 CEP170Q5SW79 1584 aa22.43■■□□□ 1.18
ZNF397-212ENST00000601719 GRIN2AQ12879 1464 aa22.42■■□□□ 1.18
ZNF397-212ENST00000601719 FAM69CQ0P6D2 419 aa22.42■■□□□ 1.18
ZNF397-212ENST00000601719 ABCA10Q8WWZ4 1543 aa22.41■■□□□ 1.18
ZNF397-212ENST00000601719 KIF13AQ9H1H9 1805 aa22.38■■□□□ 1.17
ZNF397-212ENST00000601719 ABCC10Q5T3U5 1492 aa22.37■■□□□ 1.17
ZNF397-212ENST00000601719 PBRM1Q86U86 1689 aa22.35■■□□□ 1.17
ZNF397-212ENST00000601719 ABCA5Q8WWZ7 1642 aa22.34■■□□□ 1.17
ZNF397-212ENST00000601719 SHROOM2Q13796 1616 aa22.33■■□□□ 1.17
ZNF397-212ENST00000601719 JPH4Q96JJ6 628 aa22.28■■□□□ 1.16
ZNF397-212ENST00000601719 PRG4Q92954 1404 aaPredicted RBP22.28■■□□□ 1.16
ZNF397-212ENST00000601719 FHAD1B1AJZ9 1412 aa22.25■■□□□ 1.15
ZNF397-212ENST00000601719 NPM1P06748 294 aaKnown RBP eCLIP22.25■■□□□ 1.15
ZNF397-212ENST00000601719 MAPKBP1O60336 1514 aa22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms