RNA–Protein interactions for RNA: ENST00000601609.1

PPFIA4-213, Transcript of PTPRF interacting protein alpha 4, humanhuman

TSL 2

Gene PPFIA4, Length 558 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA4-213ENST00000601609 NISCHQ9Y2I1 1504 aa38.63■■■■□ 3.77
PPFIA4-213ENST00000601609 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
PPFIA4-213ENST00000601609 ABCC9O60706 1549 aa33.91■■■■□ 3.02
PPFIA4-213ENST00000601609 RB1CC1Q8TDY2 1594 aa32.52■■■□□ 2.8
PPFIA4-213ENST00000601609 DCAF8L2P0C7V8 631 aa32.5■■■□□ 2.79
PPFIA4-213ENST00000601609 NACADO15069 1562 aa32.4■■■□□ 2.78
PPFIA4-213ENST00000601609 ZCCHC6Q5VYS8 1495 aaKnown RBP32.15■■■□□ 2.74
PPFIA4-213ENST00000601609 MYO15BQ96JP2 1530 aa32.07■■■□□ 2.72
PPFIA4-213ENST00000601609 DCAF1Q9Y4B6 1507 aa31.9■■■□□ 2.7
PPFIA4-213ENST00000601609 UNC13AQ9UPW8 1703 aa31.75■■■□□ 2.67
PPFIA4-213ENST00000601609 PABPN1Q86U42 306 aaKnown RBP eCLIP31.65■■■□□ 2.66
PPFIA4-213ENST00000601609 SCRIBQ14160 1630 aa31.49■■■□□ 2.63
PPFIA4-213ENST00000601609 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
PPFIA4-213ENST00000601609 DNAJC5BQ9UF47 199 aa31.14■■■□□ 2.58
PPFIA4-213ENST00000601609 SHROOM4Q9ULL8 1493 aa31.12■■■□□ 2.57
PPFIA4-213ENST00000601609 EIF4G1Q04637 1599 aaKnown RBP30.71■■■□□ 2.51
PPFIA4-213ENST00000601609 CC2D2AQ9P2K1 1620 aa30.63■■■□□ 2.49
PPFIA4-213ENST00000601609 CECR2Q9BXF3 1484 aa30.46■■■□□ 2.47
PPFIA4-213ENST00000601609 SMARCA4P51532 1647 aa30.04■■■□□ 2.4
PPFIA4-213ENST00000601609 BAZ1AQ9NRL2 1556 aaPredicted RBP29.98■■■□□ 2.39
PPFIA4-213ENST00000601609 ATAD2BQ9ULI0 1458 aa29.88■■■□□ 2.37
PPFIA4-213ENST00000601609 SMARCA2P51531 1590 aa29.88■■■□□ 2.37
PPFIA4-213ENST00000601609 NCAPD3P42695 1498 aa29.86■■■□□ 2.37
PPFIA4-213ENST00000601609 MROH2BQ7Z745 1585 aa29.78■■■□□ 2.36
PPFIA4-213ENST00000601609 HMGXB3Q12766 1538 aa29.74■■■□□ 2.35
PPFIA4-213ENST00000601609 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
PPFIA4-213ENST00000601609 PEG3Q9GZU2 1588 aa29.67■■■□□ 2.34
PPFIA4-213ENST00000601609 WIZO95785 1651 aa29.49■■■□□ 2.31
PPFIA4-213ENST00000601609 RSF1Q96T23 1441 aaPredicted RBP29.37■■■□□ 2.29
PPFIA4-213ENST00000601609 ERCC6Q03468 1493 aa29.29■■■□□ 2.28
PPFIA4-213ENST00000601609 NESP48681 1621 aa29.26■■■□□ 2.27
PPFIA4-213ENST00000601609 TOP2AP11388 1531 aaKnown RBP29.15■■■□□ 2.26
PPFIA4-213ENST00000601609 LAMC3Q9Y6N6 1575 aa29.15■■■□□ 2.26
PPFIA4-213ENST00000601609 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.24
PPFIA4-213ENST00000601609 PDS5BQ9NTI5 1447 aa28.98■■■□□ 2.23
PPFIA4-213ENST00000601609 CUX2O14529 1486 aa28.94■■■□□ 2.22
PPFIA4-213ENST00000601609 KIF21AQ7Z4S6 1674 aa28.93■■■□□ 2.22
PPFIA4-213ENST00000601609 THOC2Q8NI27 1593 aaKnown RBP28.84■■■□□ 2.21
PPFIA4-213ENST00000601609 CFTRP13569 1480 aa28.79■■■□□ 2.2
PPFIA4-213ENST00000601609 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
PPFIA4-213ENST00000601609 CEP164Q9UPV0 1460 aa28.73■■■□□ 2.19
PPFIA4-213ENST00000601609 FANCD2Q9BXW9 1451 aa28.72■■■□□ 2.19
PPFIA4-213ENST00000601609 MRC2Q9UBG0 1479 aa28.71■■■□□ 2.19
PPFIA4-213ENST00000601609 SUPT5HO00267 1087 aaKnown RBP28.64■■■□□ 2.18
PPFIA4-213ENST00000601609 PRDM2Q13029 1718 aa28.63■■■□□ 2.17
PPFIA4-213ENST00000601609 WDR62O43379 1518 aa28.59■■■□□ 2.17
PPFIA4-213ENST00000601609 URB2Q14146 1524 aaKnown RBP28.42■■■□□ 2.14
PPFIA4-213ENST00000601609 TOPBP1Q92547 1522 aa28.23■■■□□ 2.11
PPFIA4-213ENST00000601609 ABCC8Q09428 1581 aa28.21■■■□□ 2.11
PPFIA4-213ENST00000601609 DNMBPQ6XZF7 1577 aa28.2■■■□□ 2.11
PPFIA4-213ENST00000601609 DNAJC5Q9H3Z4 198 aa28.18■■■□□ 2.1
PPFIA4-213ENST00000601609 IFT140Q96RY7 1462 aa28.1■■■□□ 2.09
PPFIA4-213ENST00000601609 POLA1P09884 1462 aaPredicted RBP27.98■■■□□ 2.07
PPFIA4-213ENST00000601609 ZNF608Q9ULD9 1512 aaPredicted RBP27.97■■■□□ 2.07
PPFIA4-213ENST00000601609 CUX1P39880 1505 aa27.96■■■□□ 2.07
PPFIA4-213ENST00000601609 FGD5Q6ZNL6 1462 aa27.92■■■□□ 2.06
PPFIA4-213ENST00000601609 TARBP1Q13395 1621 aaKnown RBP27.91■■■□□ 2.06
PPFIA4-213ENST00000601609 EIF4G3O43432 1585 aaKnown RBP27.9■■■□□ 2.06
PPFIA4-213ENST00000601609 RAD54L2Q9Y4B4 1467 aa27.89■■■□□ 2.05
PPFIA4-213ENST00000601609 SOGA1O94964 1423 aa27.87■■■□□ 2.05
PPFIA4-213ENST00000601609 AQRO60306 1485 aaKnown RBP eCLIP27.82■■■□□ 2.049e-7■■■□□ 15.8
PPFIA4-213ENST00000601609 WRNQ14191 1432 aaPredicted RBP eCLIP27.75■■■□□ 2.03
PPFIA4-213ENST00000601609 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
PPFIA4-213ENST00000601609 OSCARQ8IYS5 282 aa27.72■■■□□ 2.03
PPFIA4-213ENST00000601609 WDR97A6NE52 1622 aa27.69■■■□□ 2.02
PPFIA4-213ENST00000601609 SYNJ1O43426 1573 aa27.68■■■□□ 2.02
PPFIA4-213ENST00000601609 TOP2BQ02880 1626 aa27.67■■■□□ 2.02
PPFIA4-213ENST00000601609 BIVM-ERCC5R4GMW8 1640 aa27.67■■■□□ 2.02
PPFIA4-213ENST00000601609 FBLN2P98095 1184 aa27.61■■■□□ 2.01
PPFIA4-213ENST00000601609 SNAPC4Q5SXM2 1469 aa27.59■■■□□ 2.01
PPFIA4-213ENST00000601609 CHD1O14646 1710 aa27.59■■■□□ 2.01
PPFIA4-213ENST00000601609 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
PPFIA4-213ENST00000601609 GRIN2BQ13224 1484 aa27.57■■■□□ 2
PPFIA4-213ENST00000601609 GAPVD1Q14C86 1478 aa27.56■■■□□ 2
PPFIA4-213ENST00000601609 PBRM1Q86U86 1689 aa27.55■■■□□ 2
PPFIA4-213ENST00000601609 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
PPFIA4-213ENST00000601609 MAGI1Q96QZ7 1491 aaPredicted RBP27.51■■□□□ 1.99
PPFIA4-213ENST00000601609 CHMP7Q8WUX9 453 aaPredicted RBP27.45■■□□□ 1.98
PPFIA4-213ENST00000601609 SYNJ2O15056 1496 aa27.4■■□□□ 1.98
PPFIA4-213ENST00000601609 TRIM41Q8WV44 630 aa27.37■■□□□ 1.97
PPFIA4-213ENST00000601609 RIMBP3CA6NJZ7 1639 aa27.31■■□□□ 1.96
PPFIA4-213ENST00000601609 RIMBP3BA6NNM3 1639 aa27.31■■□□□ 1.96
PPFIA4-213ENST00000601609 RIMBP3Q9UFD9 1639 aa27.31■■□□□ 1.96
PPFIA4-213ENST00000601609 ADAMTS12P58397 1594 aa27.31■■□□□ 1.96
PPFIA4-213ENST00000601609 ARHGEF11O15085 1522 aa27.29■■□□□ 1.96
PPFIA4-213ENST00000601609 ERICH3Q5RHP9 1530 aa27.27■■□□□ 1.96
PPFIA4-213ENST00000601609 CLASP1Q7Z460 1538 aa27.22■■□□□ 1.95
PPFIA4-213ENST00000601609 GRIN2AQ12879 1464 aa27.22■■□□□ 1.95
PPFIA4-213ENST00000601609 FHAD1B1AJZ9 1412 aa27.22■■□□□ 1.95
PPFIA4-213ENST00000601609 KIF27Q86VH2 1401 aa27.19■■□□□ 1.94
PPFIA4-213ENST00000601609 CEP170Q5SW79 1584 aa27.09■■□□□ 1.93
PPFIA4-213ENST00000601609 CYB5RLQ6IPT4 315 aa27.06■■□□□ 1.92
PPFIA4-213ENST00000601609 NUP160Q12769 1436 aa27.06■■□□□ 1.92
PPFIA4-213ENST00000601609 ARAP1Q96P48 1450 aa27.05■■□□□ 1.92
PPFIA4-213ENST00000601609 CUL7Q14999 1698 aa27.04■■□□□ 1.92
PPFIA4-213ENST00000601609 IGF1RP08069 1367 aa27.02■■□□□ 1.92
PPFIA4-213ENST00000601609 CARMIL1Q5VZK9 1371 aa26.91■■□□□ 1.9
PPFIA4-213ENST00000601609 RUSC2Q8N2Y8 1516 aa26.9■■□□□ 1.9
PPFIA4-213ENST00000601609 SHROOM2Q13796 1616 aa26.87■■□□□ 1.89
PPFIA4-213ENST00000601609 ERCC6L2Q5T890 1561 aa26.86■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms