RNA–Protein interactions for RNA: ENST00000601605.5

PRKD2-215, Transcript of protein kinase D2, humanhuman

TSL 5

Gene PRKD2, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD2-215ENST00000601605 NISCHQ9Y2I1 1504 aa30.49■■■□□ 2.47
PRKD2-215ENST00000601605 CCDC180Q9P1Z9 1646 aa26.99■■□□□ 1.91
PRKD2-215ENST00000601605 ABCC9O60706 1549 aa25.83■■□□□ 1.73
PRKD2-215ENST00000601605 ZCCHC6Q5VYS8 1495 aaKnown RBP25.52■■□□□ 1.68
PRKD2-215ENST00000601605 DCAF1Q9Y4B6 1507 aa25.29■■□□□ 1.64
PRKD2-215ENST00000601605 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
PRKD2-215ENST00000601605 NACADO15069 1562 aa25.22■■□□□ 1.63
PRKD2-215ENST00000601605 MYO15BQ96JP2 1530 aa25.22■■□□□ 1.63
PRKD2-215ENST00000601605 RB1CC1Q8TDY2 1594 aa25.15■■□□□ 1.62
PRKD2-215ENST00000601605 SCRIBQ14160 1630 aa24.63■■□□□ 1.53
PRKD2-215ENST00000601605 UNC13AQ9UPW8 1703 aa24.55■■□□□ 1.52
PRKD2-215ENST00000601605 SHROOM4Q9ULL8 1493 aa24.38■■□□□ 1.49
PRKD2-215ENST00000601605 BICRAQ9NZM4 1560 aa24.25■■□□□ 1.47
PRKD2-215ENST00000601605 PABPN1Q86U42 306 aaKnown RBP eCLIP24.17■■□□□ 1.46
PRKD2-215ENST00000601605 BAZ1AQ9NRL2 1556 aaPredicted RBP23.67■■□□□ 1.38
PRKD2-215ENST00000601605 EIF4G1Q04637 1599 aaKnown RBP23.65■■□□□ 1.38
PRKD2-215ENST00000601605 CECR2Q9BXF3 1484 aa23.63■■□□□ 1.37
PRKD2-215ENST00000601605 SMARCA4P51532 1647 aa23.59■■□□□ 1.37
PRKD2-215ENST00000601605 MROH2BQ7Z745 1585 aa23.48■■□□□ 1.35
PRKD2-215ENST00000601605 CC2D2AQ9P2K1 1620 aa23.41■■□□□ 1.34
PRKD2-215ENST00000601605 RSF1Q96T23 1441 aaPredicted RBP23.39■■□□□ 1.33
PRKD2-215ENST00000601605 SMARCA2P51531 1590 aa23.37■■□□□ 1.33
PRKD2-215ENST00000601605 PEG3Q9GZU2 1588 aa23.34■■□□□ 1.33
PRKD2-215ENST00000601605 WIZO95785 1651 aa23.29■■□□□ 1.32
PRKD2-215ENST00000601605 ATAD2BQ9ULI0 1458 aa23.29■■□□□ 1.32
PRKD2-215ENST00000601605 HMGXB3Q12766 1538 aa23.2■■□□□ 1.3
PRKD2-215ENST00000601605 NCAPD3P42695 1498 aa23.2■■□□□ 1.3
PRKD2-215ENST00000601605 BAZ1BQ9UIG0 1483 aaKnown RBP23.2■■□□□ 1.3
PRKD2-215ENST00000601605 SUPT5HO00267 1087 aaKnown RBP23.2■■□□□ 1.3
PRKD2-215ENST00000601605 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
PRKD2-215ENST00000601605 DNAJC5BQ9UF47 199 aa23.09■■□□□ 1.29
PRKD2-215ENST00000601605 CCDC88BA6NC98 1476 aa22.77■■□□□ 1.24
PRKD2-215ENST00000601605 LAMC3Q9Y6N6 1575 aa22.59■■□□□ 1.21
PRKD2-215ENST00000601605 CADPSQ9ULU8 1353 aa22.57■■□□□ 1.2
PRKD2-215ENST00000601605 PRDM2Q13029 1718 aa22.54■■□□□ 1.2
PRKD2-215ENST00000601605 CFTRP13569 1480 aa22.54■■□□□ 1.2
PRKD2-215ENST00000601605 NESP48681 1621 aa22.46■■□□□ 1.19
PRKD2-215ENST00000601605 PDS5BQ9NTI5 1447 aa22.41■■□□□ 1.18
PRKD2-215ENST00000601605 FANCD2Q9BXW9 1451 aa22.34■■□□□ 1.17
PRKD2-215ENST00000601605 ERCC6Q03468 1493 aa22.32■■□□□ 1.16
PRKD2-215ENST00000601605 KIF21AQ7Z4S6 1674 aa22.3■■□□□ 1.16
PRKD2-215ENST00000601605 CEP164Q9UPV0 1460 aa22.29■■□□□ 1.16
PRKD2-215ENST00000601605 MRC2Q9UBG0 1479 aa22.14■■□□□ 1.13
PRKD2-215ENST00000601605 ABCC8Q09428 1581 aa22.12■■□□□ 1.13
PRKD2-215ENST00000601605 WRNQ14191 1432 aaPredicted RBP eCLIP22.11■■□□□ 1.13
PRKD2-215ENST00000601605 DNMBPQ6XZF7 1577 aa22.08■■□□□ 1.13
PRKD2-215ENST00000601605 THOC2Q8NI27 1593 aaKnown RBP22.08■■□□□ 1.13
PRKD2-215ENST00000601605 WDR62O43379 1518 aa22.04■■□□□ 1.12
PRKD2-215ENST00000601605 URB2Q14146 1524 aaKnown RBP22.03■■□□□ 1.12
PRKD2-215ENST00000601605 TOPBP1Q92547 1522 aa22.02■■□□□ 1.12
PRKD2-215ENST00000601605 TOP2BQ02880 1626 aa22.02■■□□□ 1.11
PRKD2-215ENST00000601605 BIVM-ERCC5R4GMW8 1640 aa22.02■■□□□ 1.11
PRKD2-215ENST00000601605 CUX1P39880 1505 aa22.01■■□□□ 1.11
PRKD2-215ENST00000601605 SYNJ1O43426 1573 aa21.99■■□□□ 1.11
PRKD2-215ENST00000601605 TRIM41Q8WV44 630 aa21.93■■□□□ 1.1
PRKD2-215ENST00000601605 CHIC1Q5VXU3 224 aa21.9■■□□□ 1.1
PRKD2-215ENST00000601605 FGD5Q6ZNL6 1462 aa21.9■■□□□ 1.1
PRKD2-215ENST00000601605 CUX2O14529 1486 aa21.88■■□□□ 1.09
PRKD2-215ENST00000601605 POLA1P09884 1462 aaPredicted RBP21.85■■□□□ 1.09
PRKD2-215ENST00000601605 IFT140Q96RY7 1462 aa21.79■■□□□ 1.08
PRKD2-215ENST00000601605 SOGA1O94964 1423 aa21.79■■□□□ 1.08
PRKD2-215ENST00000601605 TARBP1Q13395 1621 aaKnown RBP21.73■■□□□ 1.07
PRKD2-215ENST00000601605 RAD54L2Q9Y4B4 1467 aa21.72■■□□□ 1.07
PRKD2-215ENST00000601605 WDR97A6NE52 1622 aa21.72■■□□□ 1.07
PRKD2-215ENST00000601605 ABCA10Q8WWZ4 1543 aa21.7■■□□□ 1.07
PRKD2-215ENST00000601605 KIF27Q86VH2 1401 aa21.63■■□□□ 1.05
PRKD2-215ENST00000601605 EIF4G3O43432 1585 aaKnown RBP21.6■■□□□ 1.05
PRKD2-215ENST00000601605 ABCA5Q8WWZ7 1642 aa21.59■■□□□ 1.05
PRKD2-215ENST00000601605 EEA1Q15075 1411 aa21.58■■□□□ 1.05
PRKD2-215ENST00000601605 ZNF608Q9ULD9 1512 aaPredicted RBP21.57■■□□□ 1.04
PRKD2-215ENST00000601605 TDRD9Q8NDG6 1382 aaKnown RBP21.57■■□□□ 1.04
PRKD2-215ENST00000601605 GAPVD1Q14C86 1478 aa21.57■■□□□ 1.04
PRKD2-215ENST00000601605 PBRM1Q86U86 1689 aa21.55■■□□□ 1.04
PRKD2-215ENST00000601605 AQRO60306 1485 aaKnown RBP eCLIP21.52■■□□□ 1.046e-7■■■■■ 27.8
PRKD2-215ENST00000601605 GRIN2BQ13224 1484 aa21.5■■□□□ 1.03
PRKD2-215ENST00000601605 ERICH3Q5RHP9 1530 aa21.49■■□□□ 1.03
PRKD2-215ENST00000601605 RUSC2Q8N2Y8 1516 aa21.45■■□□□ 1.02
PRKD2-215ENST00000601605 CUL7Q14999 1698 aa21.44■■□□□ 1.02
PRKD2-215ENST00000601605 FAM9AQ8IZU1 332 aaPredicted RBP21.43■■□□□ 1.02
PRKD2-215ENST00000601605 MAGI1Q96QZ7 1491 aaPredicted RBP21.41■■□□□ 1.02
PRKD2-215ENST00000601605 SNAPC4Q5SXM2 1469 aa21.39■■□□□ 1.02
PRKD2-215ENST00000601605 CSRNP3Q8WYN3 585 aa21.39■■□□□ 1.01
PRKD2-215ENST00000601605 IGF1RP08069 1367 aa21.37■■□□□ 1.01
PRKD2-215ENST00000601605 ADAMTS12P58397 1594 aa21.37■■□□□ 1.01
PRKD2-215ENST00000601605 FHAD1B1AJZ9 1412 aa21.33■■□□□ 1.01
PRKD2-215ENST00000601605 CARMIL1Q5VZK9 1371 aa21.32■■□□□ 1
PRKD2-215ENST00000601605 KIF21BO75037 1637 aa21.3■■□□□ 1
PRKD2-215ENST00000601605 SYNJ2O15056 1496 aa21.3■■□□□ 1
PRKD2-215ENST00000601605 RAPGEF2Q9Y4G8 1499 aa21.28■■□□□ 1
PRKD2-215ENST00000601605 PRXQ9BXM0 1461 aa21.27■■□□□ 1
PRKD2-215ENST00000601605 CHMP7Q8WUX9 453 aaPredicted RBP21.25■□□□□ 0.99
PRKD2-215ENST00000601605 CHD1O14646 1710 aa21.24■□□□□ 0.99
PRKD2-215ENST00000601605 FBLN2P98095 1184 aa21.23■□□□□ 0.99
PRKD2-215ENST00000601605 GOLGA3Q08378 1498 aa21.22■□□□□ 0.99
PRKD2-215ENST00000601605 GRIN2AQ12879 1464 aa21.22■□□□□ 0.99
PRKD2-215ENST00000601605 CTTNBP2Q8WZ74 1663 aa21.12■□□□□ 0.97
PRKD2-215ENST00000601605 UBTFP17480 764 aaKnown RBP21.1■□□□□ 0.97
PRKD2-215ENST00000601605 EHMT2Q96KQ7 1210 aa21.1■□□□□ 0.97
PRKD2-215ENST00000601605 CEP170Q5SW79 1584 aa21.07■□□□□ 0.96
PRKD2-215ENST00000601605 NUP160Q12769 1436 aa21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms