RNA–Protein interactions for RNA: ENST00000601582.1

SYMPK-216, Transcript of symplekin, humanhuman

TSL 4

Gene SYMPK, Length 544 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYMPK-216ENST00000601582 NISCHQ9Y2I1 1504 aa29.04■■■□□ 2.24
SYMPK-216ENST00000601582 CCDC180Q9P1Z9 1646 aa25.95■■□□□ 1.74
SYMPK-216ENST00000601582 ABCC9O60706 1549 aa25.87■■□□□ 1.73
SYMPK-216ENST00000601582 RB1CC1Q8TDY2 1594 aa24.64■■□□□ 1.54
SYMPK-216ENST00000601582 DCAF8L2P0C7V8 631 aa24.54■■□□□ 1.52
SYMPK-216ENST00000601582 NACADO15069 1562 aa24.51■■□□□ 1.51
SYMPK-216ENST00000601582 MYO15BQ96JP2 1530 aa24.2■■□□□ 1.46
SYMPK-216ENST00000601582 DNAJC5BQ9UF47 199 aa24.19■■□□□ 1.46
SYMPK-216ENST00000601582 PABPN1Q86U42 306 aaKnown RBP eCLIP24.16■■□□□ 1.46
SYMPK-216ENST00000601582 UNC13AQ9UPW8 1703 aa24.14■■□□□ 1.45
SYMPK-216ENST00000601582 ZCCHC6Q5VYS8 1495 aaKnown RBP24.09■■□□□ 1.45
SYMPK-216ENST00000601582 BICRAQ9NZM4 1560 aa23.96■■□□□ 1.43
SYMPK-216ENST00000601582 DCAF1Q9Y4B6 1507 aa23.96■■□□□ 1.43
SYMPK-216ENST00000601582 SCRIBQ14160 1630 aa23.71■■□□□ 1.39
SYMPK-216ENST00000601582 SHROOM4Q9ULL8 1493 aa23.55■■□□□ 1.36
SYMPK-216ENST00000601582 CC2D2AQ9P2K1 1620 aa23.37■■□□□ 1.33
SYMPK-216ENST00000601582 EIF4G1Q04637 1599 aaKnown RBP23.34■■□□□ 1.33
SYMPK-216ENST00000601582 CECR2Q9BXF3 1484 aa23.26■■□□□ 1.31
SYMPK-216ENST00000601582 NCAPD3P42695 1498 aa22.65■■□□□ 1.22
SYMPK-216ENST00000601582 SMARCA4P51532 1647 aa22.62■■□□□ 1.21
SYMPK-216ENST00000601582 ATAD2BQ9ULI0 1458 aa22.61■■□□□ 1.21
SYMPK-216ENST00000601582 SMARCA2P51531 1590 aa22.52■■□□□ 1.2
SYMPK-216ENST00000601582 BAZ1AQ9NRL2 1556 aaPredicted RBP22.51■■□□□ 1.19
SYMPK-216ENST00000601582 HMGXB3Q12766 1538 aa22.46■■□□□ 1.19
SYMPK-216ENST00000601582 MROH2BQ7Z745 1585 aa22.41■■□□□ 1.18
SYMPK-216ENST00000601582 BAZ1BQ9UIG0 1483 aaKnown RBP22.39■■□□□ 1.17
SYMPK-216ENST00000601582 PEG3Q9GZU2 1588 aa22.38■■□□□ 1.17
SYMPK-216ENST00000601582 ERCC6Q03468 1493 aa22.28■■□□□ 1.16
SYMPK-216ENST00000601582 NESP48681 1621 aa22.28■■□□□ 1.16
SYMPK-216ENST00000601582 CUX2O14529 1486 aa22.17■■□□□ 1.14
SYMPK-216ENST00000601582 WIZO95785 1651 aa22.16■■□□□ 1.14
SYMPK-216ENST00000601582 LAMC3Q9Y6N6 1575 aa22.09■■□□□ 1.13
SYMPK-216ENST00000601582 DNAJC5Q9H3Z4 198 aa22.04■■□□□ 1.12
SYMPK-216ENST00000601582 RSF1Q96T23 1441 aaPredicted RBP22■■□□□ 1.11
SYMPK-216ENST00000601582 KIF21AQ7Z4S6 1674 aa21.98■■□□□ 1.11
SYMPK-216ENST00000601582 THOC2Q8NI27 1593 aaKnown RBP21.98■■□□□ 1.11
SYMPK-216ENST00000601582 CADPSQ9ULU8 1353 aa21.98■■□□□ 1.11
SYMPK-216ENST00000601582 PDS5BQ9NTI5 1447 aa21.97■■□□□ 1.11
SYMPK-216ENST00000601582 TOP2AP11388 1531 aaKnown RBP21.84■■□□□ 1.09
SYMPK-216ENST00000601582 MRC2Q9UBG0 1479 aa21.77■■□□□ 1.07
SYMPK-216ENST00000601582 CFTRP13569 1480 aa21.75■■□□□ 1.07
SYMPK-216ENST00000601582 FANCD2Q9BXW9 1451 aa21.72■■□□□ 1.07
SYMPK-216ENST00000601582 CEP164Q9UPV0 1460 aa21.71■■□□□ 1.07
SYMPK-216ENST00000601582 WDR62O43379 1518 aa21.7■■□□□ 1.07
SYMPK-216ENST00000601582 CCDC88BA6NC98 1476 aa21.64■■□□□ 1.05
SYMPK-216ENST00000601582 URB2Q14146 1524 aaKnown RBP21.55■■□□□ 1.04
SYMPK-216ENST00000601582 PRDM2Q13029 1718 aa21.52■■□□□ 1.04
SYMPK-216ENST00000601582 TOPBP1Q92547 1522 aa21.34■■□□□ 1.01
SYMPK-216ENST00000601582 IFT140Q96RY7 1462 aa21.27■■□□□ 1
SYMPK-216ENST00000601582 ZNF608Q9ULD9 1512 aaPredicted RBP21.27■■□□□ 1
SYMPK-216ENST00000601582 ABCC8Q09428 1581 aa21.26■□□□□ 0.99
SYMPK-216ENST00000601582 DNMBPQ6XZF7 1577 aa21.25■□□□□ 0.99
SYMPK-216ENST00000601582 OSCARQ8IYS5 282 aa21.25■□□□□ 0.99
SYMPK-216ENST00000601582 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
SYMPK-216ENST00000601582 TRIM41Q8WV44 630 aa21.17■□□□□ 0.98
SYMPK-216ENST00000601582 TARBP1Q13395 1621 aaKnown RBP21.14■□□□□ 0.97
SYMPK-216ENST00000601582 POLA1P09884 1462 aaPredicted RBP21.13■□□□□ 0.97
SYMPK-216ENST00000601582 EIF4G3O43432 1585 aaKnown RBP21.12■□□□□ 0.97
SYMPK-216ENST00000601582 AQRO60306 1485 aaKnown RBP eCLIP21.11■□□□□ 0.97
SYMPK-216ENST00000601582 RAD54L2Q9Y4B4 1467 aa21.08■□□□□ 0.97
SYMPK-216ENST00000601582 SOGA1O94964 1423 aa21.04■□□□□ 0.96
SYMPK-216ENST00000601582 CUX1P39880 1505 aa21.04■□□□□ 0.96
SYMPK-216ENST00000601582 FGD5Q6ZNL6 1462 aa21.02■□□□□ 0.96
SYMPK-216ENST00000601582 TDRD9Q8NDG6 1382 aaKnown RBP21■□□□□ 0.95
SYMPK-216ENST00000601582 CHD1O14646 1710 aa20.95■□□□□ 0.94
SYMPK-216ENST00000601582 FBLN2P98095 1184 aa20.95■□□□□ 0.94
SYMPK-216ENST00000601582 RIMBP3CA6NJZ7 1639 aa20.93■□□□□ 0.94
SYMPK-216ENST00000601582 RIMBP3BA6NNM3 1639 aa20.93■□□□□ 0.94
SYMPK-216ENST00000601582 RIMBP3Q9UFD9 1639 aa20.93■□□□□ 0.94
SYMPK-216ENST00000601582 ARHGEF11O15085 1522 aa20.88■□□□□ 0.93
SYMPK-216ENST00000601582 WDR97A6NE52 1622 aa20.86■□□□□ 0.93
SYMPK-216ENST00000601582 SNAPC4Q5SXM2 1469 aa20.86■□□□□ 0.93
SYMPK-216ENST00000601582 GRIN2BQ13224 1484 aa20.81■□□□□ 0.92
SYMPK-216ENST00000601582 CHMP7Q8WUX9 453 aaPredicted RBP20.79■□□□□ 0.92
SYMPK-216ENST00000601582 GAPVD1Q14C86 1478 aa20.78■□□□□ 0.92
SYMPK-216ENST00000601582 MAGI1Q96QZ7 1491 aaPredicted RBP20.78■□□□□ 0.92
SYMPK-216ENST00000601582 ABCA10Q8WWZ4 1543 aa20.78■□□□□ 0.92
SYMPK-216ENST00000601582 CYB5RLQ6IPT4 315 aa20.77■□□□□ 0.92
SYMPK-216ENST00000601582 PBRM1Q86U86 1689 aa20.76■□□□□ 0.91
SYMPK-216ENST00000601582 WRNQ14191 1432 aaPredicted RBP eCLIP20.73■□□□□ 0.91
SYMPK-216ENST00000601582 ABCA5Q8WWZ7 1642 aa20.73■□□□□ 0.91
SYMPK-216ENST00000601582 SYNJ1O43426 1573 aa20.72■□□□□ 0.91
SYMPK-216ENST00000601582 BIVM-ERCC5R4GMW8 1640 aa20.72■□□□□ 0.91
SYMPK-216ENST00000601582 SYNJ2O15056 1496 aa20.72■□□□□ 0.91
SYMPK-216ENST00000601582 TOP2BQ02880 1626 aa20.71■□□□□ 0.91
SYMPK-216ENST00000601582 CLASP1Q7Z460 1538 aa20.7■□□□□ 0.9
SYMPK-216ENST00000601582 ARAP1Q96P48 1450 aa20.69■□□□□ 0.9
SYMPK-216ENST00000601582 GRIN2AQ12879 1464 aa20.56■□□□□ 0.88
SYMPK-216ENST00000601582 ADAMTS12P58397 1594 aa20.55■□□□□ 0.88
SYMPK-216ENST00000601582 FHAD1B1AJZ9 1412 aa20.51■□□□□ 0.87
SYMPK-216ENST00000601582 ERICH3Q5RHP9 1530 aa20.5■□□□□ 0.87
SYMPK-216ENST00000601582 CEP170Q5SW79 1584 aa20.48■□□□□ 0.87
SYMPK-216ENST00000601582 NUP160Q12769 1436 aa20.48■□□□□ 0.87
SYMPK-216ENST00000601582 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
SYMPK-216ENST00000601582 ERCC6L2Q5T890 1561 aa20.44■□□□□ 0.86
SYMPK-216ENST00000601582 SHROOM2Q13796 1616 aa20.36■□□□□ 0.85
SYMPK-216ENST00000601582 IGF1RP08069 1367 aa20.34■□□□□ 0.85
SYMPK-216ENST00000601582 KIF27Q86VH2 1401 aa20.32■□□□□ 0.84
SYMPK-216ENST00000601582 JPH4Q96JJ6 628 aa20.31■□□□□ 0.84
SYMPK-216ENST00000601582 PRG4Q92954 1404 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms