RNA–Protein interactions for RNA: ENST00000601549.1

KCNN4-208, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,093 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-208ENST00000601549 NISCHQ9Y2I1 1504 aa42.36■■■■■ 4.37
KCNN4-208ENST00000601549 CCDC180Q9P1Z9 1646 aa37.33■■■■□ 3.57
KCNN4-208ENST00000601549 ABCC9O60706 1549 aa35.99■■■■□ 3.35
KCNN4-208ENST00000601549 ZCCHC6Q5VYS8 1495 aaKnown RBP35.48■■■■□ 3.27
KCNN4-208ENST00000601549 DCAF1Q9Y4B6 1507 aa35.24■■■■□ 3.23
KCNN4-208ENST00000601549 MYO15BQ96JP2 1530 aa35.12■■■■□ 3.21
KCNN4-208ENST00000601549 NACADO15069 1562 aa34.94■■■■□ 3.18
KCNN4-208ENST00000601549 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
KCNN4-208ENST00000601549 RB1CC1Q8TDY2 1594 aa34.81■■■■□ 3.16
KCNN4-208ENST00000601549 DNAJC5BQ9UF47 199 aa34.1■■■■□ 3.05
KCNN4-208ENST00000601549 SCRIBQ14160 1630 aa33.94■■■■□ 3.02
KCNN4-208ENST00000601549 UNC13AQ9UPW8 1703 aa33.89■■■■□ 3.02
KCNN4-208ENST00000601549 SHROOM4Q9ULL8 1493 aa33.74■■■□□ 2.99
KCNN4-208ENST00000601549 PABPN1Q86U42 306 aaKnown RBP eCLIP33.64■■■□□ 2.98
KCNN4-208ENST00000601549 BICRAQ9NZM4 1560 aa33.63■■■□□ 2.97
KCNN4-208ENST00000601549 BAZ1AQ9NRL2 1556 aaPredicted RBP32.83■■■□□ 2.85
KCNN4-208ENST00000601549 EIF4G1Q04637 1599 aaKnown RBP32.79■■■□□ 2.84
KCNN4-208ENST00000601549 DNAJC5Q9H3Z4 198 aa32.77■■■□□ 2.84
KCNN4-208ENST00000601549 CECR2Q9BXF3 1484 aa32.77■■■□□ 2.84
KCNN4-208ENST00000601549 SMARCA4P51532 1647 aa32.65■■■□□ 2.82
KCNN4-208ENST00000601549 RSF1Q96T23 1441 aaPredicted RBP32.58■■■□□ 2.81
KCNN4-208ENST00000601549 CC2D2AQ9P2K1 1620 aa32.57■■■□□ 2.8
KCNN4-208ENST00000601549 MROH2BQ7Z745 1585 aa32.57■■■□□ 2.8
KCNN4-208ENST00000601549 PEG3Q9GZU2 1588 aa32.43■■■□□ 2.78
KCNN4-208ENST00000601549 SMARCA2P51531 1590 aa32.37■■■□□ 2.77
KCNN4-208ENST00000601549 ATAD2BQ9ULI0 1458 aa32.29■■■□□ 2.76
KCNN4-208ENST00000601549 SUPT5HO00267 1087 aaKnown RBP32.25■■■□□ 2.75
KCNN4-208ENST00000601549 NCAPD3P42695 1498 aa32.23■■■□□ 2.75
KCNN4-208ENST00000601549 WIZO95785 1651 aa32.2■■■□□ 2.74
KCNN4-208ENST00000601549 HMGXB3Q12766 1538 aa32.14■■■□□ 2.74
KCNN4-208ENST00000601549 BAZ1BQ9UIG0 1483 aaKnown RBP32.08■■■□□ 2.73
KCNN4-208ENST00000601549 TOP2AP11388 1531 aaKnown RBP32.06■■■□□ 2.72
KCNN4-208ENST00000601549 CCDC88BA6NC98 1476 aa31.63■■■□□ 2.65
KCNN4-208ENST00000601549 CADPSQ9ULU8 1353 aa31.3■■■□□ 2.6
KCNN4-208ENST00000601549 CFTRP13569 1480 aa31.29■■■□□ 2.6
KCNN4-208ENST00000601549 LAMC3Q9Y6N6 1575 aa31.25■■■□□ 2.59
KCNN4-208ENST00000601549 NESP48681 1621 aa31.17■■■□□ 2.58
KCNN4-208ENST00000601549 ERCC6Q03468 1493 aa31.08■■■□□ 2.57
KCNN4-208ENST00000601549 PDS5BQ9NTI5 1447 aa31.06■■■□□ 2.56
KCNN4-208ENST00000601549 PRDM2Q13029 1718 aa31.03■■■□□ 2.56
KCNN4-208ENST00000601549 FANCD2Q9BXW9 1451 aa30.89■■■□□ 2.53
KCNN4-208ENST00000601549 KIF21AQ7Z4S6 1674 aa30.84■■■□□ 2.53
KCNN4-208ENST00000601549 CEP164Q9UPV0 1460 aa30.79■■■□□ 2.52
KCNN4-208ENST00000601549 WRNQ14191 1432 aaPredicted RBP eCLIP30.72■■■□□ 2.51
KCNN4-208ENST00000601549 ABCC8Q09428 1581 aa30.71■■■□□ 2.51
KCNN4-208ENST00000601549 CHIC1Q5VXU3 224 aa30.69■■■□□ 2.5
KCNN4-208ENST00000601549 THOC2Q8NI27 1593 aaKnown RBP30.69■■■□□ 2.5
KCNN4-208ENST00000601549 MRC2Q9UBG0 1479 aa30.69■■■□□ 2.5
KCNN4-208ENST00000601549 CUX2O14529 1486 aa30.67■■■□□ 2.5
KCNN4-208ENST00000601549 TRIM41Q8WV44 630 aa30.56■■■□□ 2.48
KCNN4-208ENST00000601549 WDR62O43379 1518 aa30.56■■■□□ 2.48
KCNN4-208ENST00000601549 TOP2BQ02880 1626 aa30.55■■■□□ 2.48
KCNN4-208ENST00000601549 DNMBPQ6XZF7 1577 aa30.54■■■□□ 2.48
KCNN4-208ENST00000601549 CUX1P39880 1505 aa30.52■■■□□ 2.48
KCNN4-208ENST00000601549 BIVM-ERCC5R4GMW8 1640 aa30.51■■■□□ 2.48
KCNN4-208ENST00000601549 SYNJ1O43426 1573 aa30.48■■■□□ 2.47
KCNN4-208ENST00000601549 URB2Q14146 1524 aaKnown RBP30.47■■■□□ 2.47
KCNN4-208ENST00000601549 TOPBP1Q92547 1522 aa30.47■■■□□ 2.47
KCNN4-208ENST00000601549 FGD5Q6ZNL6 1462 aa30.3■■■□□ 2.44
KCNN4-208ENST00000601549 POLA1P09884 1462 aaPredicted RBP30.27■■■□□ 2.44
KCNN4-208ENST00000601549 SOGA1O94964 1423 aa30.2■■■□□ 2.42
KCNN4-208ENST00000601549 IFT140Q96RY7 1462 aa30.16■■■□□ 2.42
KCNN4-208ENST00000601549 EEA1Q15075 1411 aa30.15■■■□□ 2.42
KCNN4-208ENST00000601549 ABCA10Q8WWZ4 1543 aa30.14■■■□□ 2.42
KCNN4-208ENST00000601549 WDR97A6NE52 1622 aa30.07■■■□□ 2.4
KCNN4-208ENST00000601549 KIF27Q86VH2 1401 aa30.06■■■□□ 2.4
KCNN4-208ENST00000601549 TARBP1Q13395 1621 aaKnown RBP30.06■■■□□ 2.4
KCNN4-208ENST00000601549 RAD54L2Q9Y4B4 1467 aa30.04■■■□□ 2.4
KCNN4-208ENST00000601549 ZNF608Q9ULD9 1512 aaPredicted RBP29.89■■■□□ 2.38
KCNN4-208ENST00000601549 ABCA5Q8WWZ7 1642 aa29.87■■■□□ 2.37
KCNN4-208ENST00000601549 GAPVD1Q14C86 1478 aa29.86■■■□□ 2.37
KCNN4-208ENST00000601549 CSRNP3Q8WYN3 585 aa29.85■■■□□ 2.37
KCNN4-208ENST00000601549 TDRD9Q8NDG6 1382 aaKnown RBP29.84■■■□□ 2.37
KCNN4-208ENST00000601549 EIF4G3O43432 1585 aaKnown RBP29.83■■■□□ 2.37
KCNN4-208ENST00000601549 ERICH3Q5RHP9 1530 aa29.81■■■□□ 2.36
KCNN4-208ENST00000601549 RUSC2Q8N2Y8 1516 aa29.81■■■□□ 2.36
KCNN4-208ENST00000601549 GRIN2BQ13224 1484 aa29.78■■■□□ 2.36
KCNN4-208ENST00000601549 IGF1RP08069 1367 aa29.77■■■□□ 2.36
KCNN4-208ENST00000601549 AQRO60306 1485 aaKnown RBP eCLIP29.76■■■□□ 2.357e-7■■■□□ 18.7
KCNN4-208ENST00000601549 FAM9AQ8IZU1 332 aaPredicted RBP29.71■■■□□ 2.35
KCNN4-208ENST00000601549 CUL7Q14999 1698 aa29.68■■■□□ 2.34
KCNN4-208ENST00000601549 PRXQ9BXM0 1461 aa29.68■■■□□ 2.34
KCNN4-208ENST00000601549 MAGI1Q96QZ7 1491 aaPredicted RBP29.64■■■□□ 2.34
KCNN4-208ENST00000601549 KIF21BO75037 1637 aa29.63■■■□□ 2.33
KCNN4-208ENST00000601549 PBRM1Q86U86 1689 aa29.63■■■□□ 2.33
KCNN4-208ENST00000601549 CARMIL1Q5VZK9 1371 aa29.63■■■□□ 2.33
KCNN4-208ENST00000601549 FHAD1B1AJZ9 1412 aa29.6■■■□□ 2.33
KCNN4-208ENST00000601549 RAPGEF2Q9Y4G8 1499 aa29.56■■■□□ 2.32
KCNN4-208ENST00000601549 GOLGA3Q08378 1498 aa29.55■■■□□ 2.32
KCNN4-208ENST00000601549 SNAPC4Q5SXM2 1469 aa29.54■■■□□ 2.32
KCNN4-208ENST00000601549 ADAMTS12P58397 1594 aa29.52■■■□□ 2.32
KCNN4-208ENST00000601549 SYNJ2O15056 1496 aa29.48■■■□□ 2.31
KCNN4-208ENST00000601549 OSCARQ8IYS5 282 aa29.44■■■□□ 2.3
KCNN4-208ENST00000601549 FBLN2P98095 1184 aa29.42■■■□□ 2.3
KCNN4-208ENST00000601549 CHMP7Q8WUX9 453 aaPredicted RBP29.4■■■□□ 2.3
KCNN4-208ENST00000601549 CHD1O14646 1710 aa29.38■■■□□ 2.29
KCNN4-208ENST00000601549 TNIKQ9UKE5 1360 aa29.36■■■□□ 2.29
KCNN4-208ENST00000601549 GRIN2AQ12879 1464 aa29.36■■■□□ 2.29
KCNN4-208ENST00000601549 UBTFP17480 764 aaKnown RBP29.32■■■□□ 2.28
KCNN4-208ENST00000601549 LOC105371045A0A1W2PR82 267 aa29.3■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 130.5 ms