RNA–Protein interactions for RNA: ENST00000601522.1

TMEM143-213, Transcript of transmembrane protein 143, humanhuman

TSL 2

Gene TMEM143, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM143-213ENST00000601522 NISCHQ9Y2I1 1504 aa50.33■■■■■ 5.65
TMEM143-213ENST00000601522 CCDC180Q9P1Z9 1646 aa44.79■■■■■ 4.76
TMEM143-213ENST00000601522 ABCC9O60706 1549 aa44.05■■■■■ 4.64
TMEM143-213ENST00000601522 RB1CC1Q8TDY2 1594 aa42.34■■■■■ 4.37
TMEM143-213ENST00000601522 DCAF8L2P0C7V8 631 aa42.3■■■■■ 4.36
TMEM143-213ENST00000601522 NACADO15069 1562 aa42.25■■■■■ 4.35
TMEM143-213ENST00000601522 MYO15BQ96JP2 1530 aa41.95■■■■■ 4.31
TMEM143-213ENST00000601522 ZCCHC6Q5VYS8 1495 aaKnown RBP41.85■■■■■ 4.29
TMEM143-213ENST00000601522 DCAF1Q9Y4B6 1507 aa41.67■■■■■ 4.26
TMEM143-213ENST00000601522 PABPN1Q86U42 306 aaKnown RBP eCLIP41.19■■■■■ 4.18
TMEM143-213ENST00000601522 UNC13AQ9UPW8 1703 aa41.17■■■■■ 4.18
TMEM143-213ENST00000601522 BICRAQ9NZM4 1560 aa40.93■■■■■ 4.14
TMEM143-213ENST00000601522 SCRIBQ14160 1630 aa40.82■■■■■ 4.13
TMEM143-213ENST00000601522 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
TMEM143-213ENST00000601522 DNAJC5BQ9UF47 199 aa40.62■■■■■ 4.09
TMEM143-213ENST00000601522 EIF4G1Q04637 1599 aaKnown RBP39.93■■■■□ 3.98
TMEM143-213ENST00000601522 CC2D2AQ9P2K1 1620 aa39.81■■■■□ 3.96
TMEM143-213ENST00000601522 CECR2Q9BXF3 1484 aa39.65■■■■□ 3.94
TMEM143-213ENST00000601522 BAZ1AQ9NRL2 1556 aaPredicted RBP39.06■■■■□ 3.84
TMEM143-213ENST00000601522 SMARCA4P51532 1647 aa39.04■■■■□ 3.84
TMEM143-213ENST00000601522 NCAPD3P42695 1498 aa39■■■■□ 3.83
TMEM143-213ENST00000601522 ATAD2BQ9ULI0 1458 aa38.95■■■■□ 3.83
TMEM143-213ENST00000601522 SMARCA2P51531 1590 aa38.92■■■■□ 3.82
TMEM143-213ENST00000601522 MROH2BQ7Z745 1585 aa38.74■■■■□ 3.79
TMEM143-213ENST00000601522 HMGXB3Q12766 1538 aa38.73■■■■□ 3.79
TMEM143-213ENST00000601522 PEG3Q9GZU2 1588 aa38.7■■■■□ 3.79
TMEM143-213ENST00000601522 BAZ1BQ9UIG0 1483 aaKnown RBP38.64■■■■□ 3.78
TMEM143-213ENST00000601522 WIZO95785 1651 aa38.28■■■■□ 3.72
TMEM143-213ENST00000601522 RSF1Q96T23 1441 aaPredicted RBP38.28■■■■□ 3.72
TMEM143-213ENST00000601522 ERCC6Q03468 1493 aa38.07■■■■□ 3.68
TMEM143-213ENST00000601522 NESP48681 1621 aa38.01■■■■□ 3.68
TMEM143-213ENST00000601522 LAMC3Q9Y6N6 1575 aa37.97■■■■□ 3.67
TMEM143-213ENST00000601522 TOP2AP11388 1531 aaKnown RBP37.92■■■■□ 3.66
TMEM143-213ENST00000601522 CADPSQ9ULU8 1353 aa37.88■■■■□ 3.65
TMEM143-213ENST00000601522 PDS5BQ9NTI5 1447 aa37.82■■■■□ 3.64
TMEM143-213ENST00000601522 CUX2O14529 1486 aa37.72■■■■□ 3.63
TMEM143-213ENST00000601522 CFTRP13569 1480 aa37.56■■■■□ 3.6
TMEM143-213ENST00000601522 CCDC88BA6NC98 1476 aa37.51■■■■□ 3.59
TMEM143-213ENST00000601522 KIF21AQ7Z4S6 1674 aa37.5■■■■□ 3.59
TMEM143-213ENST00000601522 THOC2Q8NI27 1593 aaKnown RBP37.44■■■■□ 3.58
TMEM143-213ENST00000601522 FANCD2Q9BXW9 1451 aa37.39■■■■□ 3.58
TMEM143-213ENST00000601522 CEP164Q9UPV0 1460 aa37.37■■■■□ 3.57
TMEM143-213ENST00000601522 MRC2Q9UBG0 1479 aa37.35■■■■□ 3.57
TMEM143-213ENST00000601522 SUPT5HO00267 1087 aaKnown RBP37.25■■■■□ 3.55
TMEM143-213ENST00000601522 WDR62O43379 1518 aa37.18■■■■□ 3.54
TMEM143-213ENST00000601522 PRDM2Q13029 1718 aa37.13■■■■□ 3.53
TMEM143-213ENST00000601522 URB2Q14146 1524 aaKnown RBP36.97■■■■□ 3.51
TMEM143-213ENST00000601522 DNAJC5Q9H3Z4 198 aa36.87■■■■□ 3.49
TMEM143-213ENST00000601522 ABCC8Q09428 1581 aa36.87■■■■□ 3.49
TMEM143-213ENST00000601522 TOPBP1Q92547 1522 aa36.75■■■■□ 3.47
TMEM143-213ENST00000601522 DNMBPQ6XZF7 1577 aa36.68■■■■□ 3.46
TMEM143-213ENST00000601522 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
TMEM143-213ENST00000601522 POLA1P09884 1462 aaPredicted RBP36.41■■■■□ 3.42
TMEM143-213ENST00000601522 ZNF608Q9ULD9 1512 aaPredicted RBP36.38■■■■□ 3.41
TMEM143-213ENST00000601522 SOGA1O94964 1423 aa36.35■■■■□ 3.41
TMEM143-213ENST00000601522 CUX1P39880 1505 aa36.34■■■■□ 3.41
TMEM143-213ENST00000601522 TARBP1Q13395 1621 aaKnown RBP36.3■■■■□ 3.4
TMEM143-213ENST00000601522 FGD5Q6ZNL6 1462 aa36.3■■■■□ 3.4
TMEM143-213ENST00000601522 RAD54L2Q9Y4B4 1467 aa36.25■■■■□ 3.39
TMEM143-213ENST00000601522 OSCARQ8IYS5 282 aa36.25■■■■□ 3.39
TMEM143-213ENST00000601522 AQRO60306 1485 aaKnown RBP eCLIP36.2■■■■□ 3.39
TMEM143-213ENST00000601522 EIF4G3O43432 1585 aaKnown RBP36.19■■■■□ 3.38
TMEM143-213ENST00000601522 WRNQ14191 1432 aaPredicted RBP eCLIP36.14■■■■□ 3.38
TMEM143-213ENST00000601522 TDRD9Q8NDG6 1382 aaKnown RBP36.14■■■■□ 3.38
TMEM143-213ENST00000601522 WDR97A6NE52 1622 aa36.1■■■■□ 3.37
TMEM143-213ENST00000601522 TOP2BQ02880 1626 aa36.01■■■■□ 3.36
TMEM143-213ENST00000601522 ABCA10Q8WWZ4 1543 aa35.97■■■■□ 3.35
TMEM143-213ENST00000601522 BIVM-ERCC5R4GMW8 1640 aa35.97■■■■□ 3.35
TMEM143-213ENST00000601522 GRIN2BQ13224 1484 aa35.93■■■■□ 3.34
TMEM143-213ENST00000601522 FBLN2P98095 1184 aa35.93■■■■□ 3.34
TMEM143-213ENST00000601522 SYNJ1O43426 1573 aa35.93■■■■□ 3.34
TMEM143-213ENST00000601522 GAPVD1Q14C86 1478 aa35.89■■■■□ 3.34
TMEM143-213ENST00000601522 MAGI1Q96QZ7 1491 aaPredicted RBP35.85■■■■□ 3.33
TMEM143-213ENST00000601522 SNAPC4Q5SXM2 1469 aa35.84■■■■□ 3.33
TMEM143-213ENST00000601522 CHMP7Q8WUX9 453 aaPredicted RBP35.83■■■■□ 3.33
TMEM143-213ENST00000601522 ABCA5Q8WWZ7 1642 aa35.75■■■■□ 3.31
TMEM143-213ENST00000601522 CHD1O14646 1710 aa35.74■■■■□ 3.31
TMEM143-213ENST00000601522 SYNJ2O15056 1496 aa35.71■■■■□ 3.31
TMEM143-213ENST00000601522 PBRM1Q86U86 1689 aa35.69■■■■□ 3.3
TMEM143-213ENST00000601522 TRIM41Q8WV44 630 aa35.55■■■■□ 3.28
TMEM143-213ENST00000601522 ERICH3Q5RHP9 1530 aa35.55■■■■□ 3.28
TMEM143-213ENST00000601522 FHAD1B1AJZ9 1412 aa35.5■■■■□ 3.27
TMEM143-213ENST00000601522 ARHGEF11O15085 1522 aa35.47■■■■□ 3.27
TMEM143-213ENST00000601522 RIMBP3CA6NJZ7 1639 aa35.46■■■■□ 3.27
TMEM143-213ENST00000601522 RIMBP3BA6NNM3 1639 aa35.46■■■■□ 3.27
TMEM143-213ENST00000601522 RIMBP3Q9UFD9 1639 aa35.46■■■■□ 3.27
TMEM143-213ENST00000601522 KIF27Q86VH2 1401 aa35.45■■■■□ 3.27
TMEM143-213ENST00000601522 ADAMTS12P58397 1594 aa35.43■■■■□ 3.26
TMEM143-213ENST00000601522 GRIN2AQ12879 1464 aa35.42■■■■□ 3.26
TMEM143-213ENST00000601522 CLASP1Q7Z460 1538 aa35.41■■■■□ 3.26
TMEM143-213ENST00000601522 IGF1RP08069 1367 aa35.3■■■■□ 3.24
TMEM143-213ENST00000601522 CYB5RLQ6IPT4 315 aa35.29■■■■□ 3.24
TMEM143-213ENST00000601522 NUP160Q12769 1436 aa35.27■■■■□ 3.24
TMEM143-213ENST00000601522 CEP170Q5SW79 1584 aa35.18■■■■□ 3.22
TMEM143-213ENST00000601522 ARAP1Q96P48 1450 aa35.16■■■■□ 3.22
TMEM143-213ENST00000601522 CUL7Q14999 1698 aa35.15■■■■□ 3.22
TMEM143-213ENST00000601522 CARMIL1Q5VZK9 1371 aa35.12■■■■□ 3.21
TMEM143-213ENST00000601522 JPH4Q96JJ6 628 aa35.04■■■■□ 3.2
TMEM143-213ENST00000601522 SHROOM2Q13796 1616 aa34.96■■■■□ 3.19
TMEM143-213ENST00000601522 KIAA0586Q9BVV6 1533 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms