RNA–Protein interactions for RNA: ENST00000601452.5

VAV1-209, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene VAV1, Length 815 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-209ENST00000601452 NISCHQ9Y2I1 1504 aa42.96■■■■■ 4.47
VAV1-209ENST00000601452 CCDC180Q9P1Z9 1646 aa38.38■■■■□ 3.73
VAV1-209ENST00000601452 ABCC9O60706 1549 aa38.15■■■■□ 3.7
VAV1-209ENST00000601452 RB1CC1Q8TDY2 1594 aa36.42■■■■□ 3.42
VAV1-209ENST00000601452 DCAF8L2P0C7V8 631 aa36.26■■■■□ 3.4
VAV1-209ENST00000601452 NACADO15069 1562 aa36.23■■■■□ 3.39
VAV1-209ENST00000601452 MYO15BQ96JP2 1530 aa35.8■■■■□ 3.32
VAV1-209ENST00000601452 ZCCHC6Q5VYS8 1495 aaKnown RBP35.67■■■■□ 3.3
VAV1-209ENST00000601452 PABPN1Q86U42 306 aaKnown RBP eCLIP35.6■■■■□ 3.29
VAV1-209ENST00000601452 UNC13AQ9UPW8 1703 aa35.54■■■■□ 3.28
VAV1-209ENST00000601452 DCAF1Q9Y4B6 1507 aa35.47■■■■□ 3.27
VAV1-209ENST00000601452 DNAJC5BQ9UF47 199 aa35.46■■■■□ 3.27
VAV1-209ENST00000601452 BICRAQ9NZM4 1560 aa35.3■■■■□ 3.24
VAV1-209ENST00000601452 SCRIBQ14160 1630 aa35.06■■■■□ 3.2
VAV1-209ENST00000601452 SHROOM4Q9ULL8 1493 aa34.87■■■■□ 3.17
VAV1-209ENST00000601452 EIF4G1Q04637 1599 aaKnown RBP34.45■■■■□ 3.1
VAV1-209ENST00000601452 CC2D2AQ9P2K1 1620 aa34.44■■■■□ 3.1
VAV1-209ENST00000601452 CECR2Q9BXF3 1484 aa34.33■■■■□ 3.09
VAV1-209ENST00000601452 NCAPD3P42695 1498 aa33.44■■■□□ 2.94
VAV1-209ENST00000601452 SMARCA4P51532 1647 aa33.44■■■□□ 2.94
VAV1-209ENST00000601452 ATAD2BQ9ULI0 1458 aa33.4■■■□□ 2.94
VAV1-209ENST00000601452 SMARCA2P51531 1590 aa33.34■■■□□ 2.93
VAV1-209ENST00000601452 BAZ1AQ9NRL2 1556 aaPredicted RBP33.34■■■□□ 2.93
VAV1-209ENST00000601452 HMGXB3Q12766 1538 aa33.23■■■□□ 2.91
VAV1-209ENST00000601452 BAZ1BQ9UIG0 1483 aaKnown RBP33.13■■■□□ 2.89
VAV1-209ENST00000601452 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
VAV1-209ENST00000601452 PEG3Q9GZU2 1588 aa33.08■■■□□ 2.89
VAV1-209ENST00000601452 ERCC6Q03468 1493 aa32.95■■■□□ 2.87
VAV1-209ENST00000601452 NESP48681 1621 aa32.84■■■□□ 2.85
VAV1-209ENST00000601452 WIZO95785 1651 aa32.72■■■□□ 2.83
VAV1-209ENST00000601452 CUX2O14529 1486 aa32.72■■■□□ 2.83
VAV1-209ENST00000601452 LAMC3Q9Y6N6 1575 aa32.65■■■□□ 2.82
VAV1-209ENST00000601452 RSF1Q96T23 1441 aaPredicted RBP32.55■■■□□ 2.8
VAV1-209ENST00000601452 PDS5BQ9NTI5 1447 aa32.49■■■□□ 2.79
VAV1-209ENST00000601452 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
VAV1-209ENST00000601452 KIF21AQ7Z4S6 1674 aa32.41■■■□□ 2.78
VAV1-209ENST00000601452 THOC2Q8NI27 1593 aaKnown RBP32.41■■■□□ 2.78
VAV1-209ENST00000601452 DNAJC5Q9H3Z4 198 aa32.34■■■□□ 2.77
VAV1-209ENST00000601452 TOP2AP11388 1531 aaKnown RBP32.34■■■□□ 2.77
VAV1-209ENST00000601452 MRC2Q9UBG0 1479 aa32.17■■■□□ 2.74
VAV1-209ENST00000601452 CFTRP13569 1480 aa32.15■■■□□ 2.74
VAV1-209ENST00000601452 CEP164Q9UPV0 1460 aa32.12■■■□□ 2.73
VAV1-209ENST00000601452 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
VAV1-209ENST00000601452 WDR62O43379 1518 aa32.05■■■□□ 2.72
VAV1-209ENST00000601452 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
VAV1-209ENST00000601452 PRDM2Q13029 1718 aa31.82■■■□□ 2.68
VAV1-209ENST00000601452 URB2Q14146 1524 aaKnown RBP31.8■■■□□ 2.68
VAV1-209ENST00000601452 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
VAV1-209ENST00000601452 ABCC8Q09428 1581 aa31.48■■■□□ 2.63
VAV1-209ENST00000601452 IFT140Q96RY7 1462 aa31.46■■■□□ 2.63
VAV1-209ENST00000601452 SUPT5HO00267 1087 aaKnown RBP31.45■■■□□ 2.63
VAV1-209ENST00000601452 DNMBPQ6XZF7 1577 aa31.43■■■□□ 2.62
VAV1-209ENST00000601452 ZNF608Q9ULD9 1512 aaPredicted RBP31.37■■■□□ 2.61
VAV1-209ENST00000601452 OSCARQ8IYS5 282 aa31.33■■■□□ 2.61
VAV1-209ENST00000601452 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
VAV1-209ENST00000601452 EIF4G3O43432 1585 aaKnown RBP31.21■■■□□ 2.59
VAV1-209ENST00000601452 TARBP1Q13395 1621 aaKnown RBP31.19■■■□□ 2.58
VAV1-209ENST00000601452 TRIM41Q8WV44 630 aa31.15■■■□□ 2.58
VAV1-209ENST00000601452 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.58
VAV1-209ENST00000601452 RAD54L2Q9Y4B4 1467 aa31.13■■■□□ 2.57
VAV1-209ENST00000601452 SOGA1O94964 1423 aa31.11■■■□□ 2.57
VAV1-209ENST00000601452 CUX1P39880 1505 aa31.09■■■□□ 2.57
VAV1-209ENST00000601452 FGD5Q6ZNL6 1462 aa31.09■■■□□ 2.57
VAV1-209ENST00000601452 TDRD9Q8NDG6 1382 aaKnown RBP31.03■■■□□ 2.56
VAV1-209ENST00000601452 FBLN2P98095 1184 aa30.95■■■□□ 2.55
VAV1-209ENST00000601452 CHD1O14646 1710 aa30.9■■■□□ 2.54
VAV1-209ENST00000601452 WDR97A6NE52 1622 aa30.89■■■□□ 2.54
VAV1-209ENST00000601452 SNAPC4Q5SXM2 1469 aa30.84■■■□□ 2.53
VAV1-209ENST00000601452 RIMBP3CA6NJZ7 1639 aa30.84■■■□□ 2.53
VAV1-209ENST00000601452 RIMBP3BA6NNM3 1639 aa30.84■■■□□ 2.53
VAV1-209ENST00000601452 RIMBP3Q9UFD9 1639 aa30.84■■■□□ 2.53
VAV1-209ENST00000601452 GRIN2BQ13224 1484 aa30.8■■■□□ 2.52
VAV1-209ENST00000601452 ARHGEF11O15085 1522 aa30.78■■■□□ 2.52
VAV1-209ENST00000601452 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.51
VAV1-209ENST00000601452 CHMP7Q8WUX9 453 aaPredicted RBP30.75■■■□□ 2.51
VAV1-209ENST00000601452 GAPVD1Q14C86 1478 aa30.74■■■□□ 2.51
VAV1-209ENST00000601452 WRNQ14191 1432 aaPredicted RBP eCLIP30.73■■■□□ 2.51
VAV1-209ENST00000601452 ABCA10Q8WWZ4 1543 aa30.73■■■□□ 2.51
VAV1-209ENST00000601452 TOP2BQ02880 1626 aa30.67■■■□□ 2.5
VAV1-209ENST00000601452 PBRM1Q86U86 1689 aa30.67■■■□□ 2.5
VAV1-209ENST00000601452 BIVM-ERCC5R4GMW8 1640 aa30.65■■■□□ 2.5
VAV1-209ENST00000601452 SYNJ2O15056 1496 aa30.65■■■□□ 2.5
VAV1-209ENST00000601452 SYNJ1O43426 1573 aa30.65■■■□□ 2.5
VAV1-209ENST00000601452 ABCA5Q8WWZ7 1642 aa30.63■■■□□ 2.49
VAV1-209ENST00000601452 CYB5RLQ6IPT4 315 aa30.59■■■□□ 2.49
VAV1-209ENST00000601452 CLASP1Q7Z460 1538 aa30.55■■■□□ 2.48
VAV1-209ENST00000601452 ARAP1Q96P48 1450 aa30.5■■■□□ 2.47
VAV1-209ENST00000601452 ADAMTS12P58397 1594 aa30.41■■■□□ 2.46
VAV1-209ENST00000601452 GRIN2AQ12879 1464 aa30.39■■■□□ 2.46
VAV1-209ENST00000601452 FHAD1B1AJZ9 1412 aa30.36■■■□□ 2.45
VAV1-209ENST00000601452 ERICH3Q5RHP9 1530 aa30.36■■■□□ 2.45
VAV1-209ENST00000601452 NUP160Q12769 1436 aa30.26■■■□□ 2.43
VAV1-209ENST00000601452 CEP170Q5SW79 1584 aa30.25■■■□□ 2.43
VAV1-209ENST00000601452 TRHP20396 242 aaPredicted RBP30.19■■■□□ 2.42
VAV1-209ENST00000601452 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
VAV1-209ENST00000601452 ERCC6L2Q5T890 1561 aa30.11■■■□□ 2.41
VAV1-209ENST00000601452 SHROOM2Q13796 1616 aa30.06■■■□□ 2.4
VAV1-209ENST00000601452 IGF1RP08069 1367 aa30.05■■■□□ 2.4
VAV1-209ENST00000601452 JPH4Q96JJ6 628 aa30■■■□□ 2.39
VAV1-209ENST00000601452 PRG4Q92954 1404 aaPredicted RBP29.99■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 155.7 ms