RNA–Protein interactions for RNA: ENST00000601393.1

SNRPA-210, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 3

Gene SNRPA, Length 969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-210ENST00000601393 NISCHQ9Y2I1 1504 aa41.26■■■■■ 4.2
SNRPA-210ENST00000601393 CCDC180Q9P1Z9 1646 aa36.8■■■■□ 3.48
SNRPA-210ENST00000601393 ABCC9O60706 1549 aa35.89■■■■□ 3.34
SNRPA-210ENST00000601393 RB1CC1Q8TDY2 1594 aa34.57■■■■□ 3.12
SNRPA-210ENST00000601393 NACADO15069 1562 aa34.53■■■■□ 3.12
SNRPA-210ENST00000601393 ZCCHC6Q5VYS8 1495 aaKnown RBP34.39■■■■□ 3.1
SNRPA-210ENST00000601393 MYO15BQ96JP2 1530 aa34.36■■■■□ 3.09
SNRPA-210ENST00000601393 DCAF8L2P0C7V8 631 aa34.19■■■■□ 3.06
SNRPA-210ENST00000601393 DCAF1Q9Y4B6 1507 aa34.19■■■■□ 3.06
SNRPA-210ENST00000601393 UNC13AQ9UPW8 1703 aa33.93■■■■□ 3.02
SNRPA-210ENST00000601393 BICRAQ9NZM4 1560 aa33.61■■■□□ 2.97
SNRPA-210ENST00000601393 SCRIBQ14160 1630 aa33.47■■■□□ 2.95
SNRPA-210ENST00000601393 PABPN1Q86U42 306 aaKnown RBP eCLIP33.44■■■□□ 2.943e-10■■■□□ 15.3
SNRPA-210ENST00000601393 SHROOM4Q9ULL8 1493 aa33.22■■■□□ 2.91
SNRPA-210ENST00000601393 DNAJC5BQ9UF47 199 aa33■■■□□ 2.87
SNRPA-210ENST00000601393 EIF4G1Q04637 1599 aaKnown RBP32.67■■■□□ 2.82
SNRPA-210ENST00000601393 CC2D2AQ9P2K1 1620 aa32.55■■■□□ 2.8
SNRPA-210ENST00000601393 CECR2Q9BXF3 1484 aa32.27■■■□□ 2.76
SNRPA-210ENST00000601393 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
SNRPA-210ENST00000601393 BAZ1AQ9NRL2 1556 aaPredicted RBP31.98■■■□□ 2.71
SNRPA-210ENST00000601393 ATAD2BQ9ULI0 1458 aa31.85■■■□□ 2.69
SNRPA-210ENST00000601393 NCAPD3P42695 1498 aa31.84■■■□□ 2.69
SNRPA-210ENST00000601393 SMARCA2P51531 1590 aa31.81■■■□□ 2.68
SNRPA-210ENST00000601393 PEG3Q9GZU2 1588 aa31.8■■■□□ 2.68
SNRPA-210ENST00000601393 MROH2BQ7Z745 1585 aa31.79■■■□□ 2.68
SNRPA-210ENST00000601393 HMGXB3Q12766 1538 aa31.74■■■□□ 2.67
SNRPA-210ENST00000601393 BAZ1BQ9UIG0 1483 aaKnown RBP31.55■■■□□ 2.64
SNRPA-210ENST00000601393 WIZO95785 1651 aa31.47■■■□□ 2.63
SNRPA-210ENST00000601393 RSF1Q96T23 1441 aaPredicted RBP31.37■■■□□ 2.61
SNRPA-210ENST00000601393 TOP2AP11388 1531 aaKnown RBP31.13■■■□□ 2.57
SNRPA-210ENST00000601393 NESP48681 1621 aa31.09■■■□□ 2.57
SNRPA-210ENST00000601393 LAMC3Q9Y6N6 1575 aa31.04■■■□□ 2.56
SNRPA-210ENST00000601393 ERCC6Q03468 1493 aa30.89■■■□□ 2.53
SNRPA-210ENST00000601393 CADPSQ9ULU8 1353 aa30.86■■■□□ 2.53
SNRPA-210ENST00000601393 KIF21AQ7Z4S6 1674 aa30.81■■■□□ 2.52
SNRPA-210ENST00000601393 PDS5BQ9NTI5 1447 aa30.73■■■□□ 2.51
SNRPA-210ENST00000601393 THOC2Q8NI27 1593 aaKnown RBP30.73■■■□□ 2.51
SNRPA-210ENST00000601393 CFTRP13569 1480 aa30.72■■■□□ 2.51
SNRPA-210ENST00000601393 CCDC88BA6NC98 1476 aa30.71■■■□□ 2.51
SNRPA-210ENST00000601393 CUX2O14529 1486 aa30.68■■■□□ 2.5
SNRPA-210ENST00000601393 PRDM2Q13029 1718 aa30.62■■■□□ 2.49
SNRPA-210ENST00000601393 FANCD2Q9BXW9 1451 aa30.52■■■□□ 2.48
SNRPA-210ENST00000601393 CEP164Q9UPV0 1460 aa30.49■■■□□ 2.47
SNRPA-210ENST00000601393 MRC2Q9UBG0 1479 aa30.48■■■□□ 2.47
SNRPA-210ENST00000601393 WDR62O43379 1518 aa30.44■■■□□ 2.46
SNRPA-210ENST00000601393 SUPT5HO00267 1087 aaKnown RBP30.34■■■□□ 2.45
SNRPA-210ENST00000601393 URB2Q14146 1524 aaKnown RBP30.27■■■□□ 2.44
SNRPA-210ENST00000601393 TOPBP1Q92547 1522 aa30.06■■■□□ 2.4
SNRPA-210ENST00000601393 DNMBPQ6XZF7 1577 aa30.05■■■□□ 2.4
SNRPA-210ENST00000601393 ABCC8Q09428 1581 aa30.02■■■□□ 2.4
SNRPA-210ENST00000601393 IFT140Q96RY7 1462 aa29.86■■■□□ 2.37
SNRPA-210ENST00000601393 CUX1P39880 1505 aa29.83■■■□□ 2.37
SNRPA-210ENST00000601393 TARBP1Q13395 1621 aaKnown RBP29.81■■■□□ 2.36
SNRPA-210ENST00000601393 POLA1P09884 1462 aaPredicted RBP29.8■■■□□ 2.36
SNRPA-210ENST00000601393 ZNF608Q9ULD9 1512 aaPredicted RBP29.75■■■□□ 2.35
SNRPA-210ENST00000601393 DNAJC5Q9H3Z4 198 aa29.73■■■□□ 2.35
SNRPA-210ENST00000601393 FGD5Q6ZNL6 1462 aa29.71■■■□□ 2.35
SNRPA-210ENST00000601393 EIF4G3O43432 1585 aaKnown RBP29.69■■■□□ 2.34
SNRPA-210ENST00000601393 RAD54L2Q9Y4B4 1467 aa29.64■■■□□ 2.34
SNRPA-210ENST00000601393 BIVM-ERCC5R4GMW8 1640 aa29.62■■■□□ 2.33
SNRPA-210ENST00000601393 WDR97A6NE52 1622 aa29.61■■■□□ 2.33
SNRPA-210ENST00000601393 SOGA1O94964 1423 aa29.61■■■□□ 2.33
SNRPA-210ENST00000601393 SYNJ1O43426 1573 aa29.58■■■□□ 2.33
SNRPA-210ENST00000601393 TOP2BQ02880 1626 aa29.58■■■□□ 2.33
SNRPA-210ENST00000601393 WRNQ14191 1432 aaPredicted RBP eCLIP29.55■■■□□ 2.32
SNRPA-210ENST00000601393 AQRO60306 1485 aaKnown RBP eCLIP29.52■■■□□ 2.328e-7■■■■■ 31
SNRPA-210ENST00000601393 ABCA10Q8WWZ4 1543 aa29.45■■■□□ 2.3
SNRPA-210ENST00000601393 TDRD9Q8NDG6 1382 aaKnown RBP29.43■■■□□ 2.3
SNRPA-210ENST00000601393 ABCA5Q8WWZ7 1642 aa29.4■■■□□ 2.3
SNRPA-210ENST00000601393 PBRM1Q86U86 1689 aa29.35■■■□□ 2.29
SNRPA-210ENST00000601393 CHD1O14646 1710 aa29.34■■■□□ 2.29
SNRPA-210ENST00000601393 GRIN2BQ13224 1484 aa29.3■■■□□ 2.28
SNRPA-210ENST00000601393 GAPVD1Q14C86 1478 aa29.29■■■□□ 2.28
SNRPA-210ENST00000601393 SNAPC4Q5SXM2 1469 aa29.28■■■□□ 2.28
SNRPA-210ENST00000601393 MAGI1Q96QZ7 1491 aaPredicted RBP29.26■■■□□ 2.27
SNRPA-210ENST00000601393 OSCARQ8IYS5 282 aa29.26■■■□□ 2.27
SNRPA-210ENST00000601393 SYNJ2O15056 1496 aa29.14■■■□□ 2.26
SNRPA-210ENST00000601393 ADAMTS12P58397 1594 aa29.1■■■□□ 2.25
SNRPA-210ENST00000601393 ERICH3Q5RHP9 1530 aa29.1■■■□□ 2.25
SNRPA-210ENST00000601393 CLASP1Q7Z460 1538 aa29.03■■■□□ 2.24
SNRPA-210ENST00000601393 FBLN2P98095 1184 aa29.02■■■□□ 2.24
SNRPA-210ENST00000601393 CHMP7Q8WUX9 453 aaPredicted RBP28.98■■■□□ 2.23
SNRPA-210ENST00000601393 RIMBP3CA6NJZ7 1639 aa28.97■■■□□ 2.23
SNRPA-210ENST00000601393 RIMBP3BA6NNM3 1639 aa28.97■■■□□ 2.23
SNRPA-210ENST00000601393 RIMBP3Q9UFD9 1639 aa28.97■■■□□ 2.23
SNRPA-210ENST00000601393 FHAD1B1AJZ9 1412 aa28.95■■■□□ 2.23
SNRPA-210ENST00000601393 GRIN2AQ12879 1464 aa28.95■■■□□ 2.22
SNRPA-210ENST00000601393 ARHGEF11O15085 1522 aa28.93■■■□□ 2.22
SNRPA-210ENST00000601393 KIF27Q86VH2 1401 aa28.91■■■□□ 2.22
SNRPA-210ENST00000601393 CEP170Q5SW79 1584 aa28.86■■■□□ 2.21
SNRPA-210ENST00000601393 NUP160Q12769 1436 aa28.85■■■□□ 2.21
SNRPA-210ENST00000601393 CUL7Q14999 1698 aa28.84■■■□□ 2.21
SNRPA-210ENST00000601393 IGF1RP08069 1367 aa28.83■■■□□ 2.21
SNRPA-210ENST00000601393 SHROOM2Q13796 1616 aa28.72■■■□□ 2.19
SNRPA-210ENST00000601393 ARAP1Q96P48 1450 aa28.71■■■□□ 2.19
SNRPA-210ENST00000601393 RUSC2Q8N2Y8 1516 aa28.69■■■□□ 2.18
SNRPA-210ENST00000601393 TRIM41Q8WV44 630 aa28.68■■■□□ 2.18
SNRPA-210ENST00000601393 CARMIL1Q5VZK9 1371 aa28.62■■■□□ 2.17
SNRPA-210ENST00000601393 ERCC6L2Q5T890 1561 aa28.6■■■□□ 2.17
SNRPA-210ENST00000601393 KIAA0586Q9BVV6 1533 aa28.52■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms