RNA–Protein interactions for RNA: ENST00000601299.5

FKRP-225, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 633 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-225ENST00000601299 NISCHQ9Y2I1 1504 aa41.24■■■■■ 4.19
FKRP-225ENST00000601299 ABCC9O60706 1549 aa36.91■■■■□ 3.5
FKRP-225ENST00000601299 CCDC180Q9P1Z9 1646 aa36.75■■■■□ 3.47
FKRP-225ENST00000601299 RB1CC1Q8TDY2 1594 aa35.03■■■■□ 3.2
FKRP-225ENST00000601299 DCAF8L2P0C7V8 631 aa34.88■■■■□ 3.17
FKRP-225ENST00000601299 NACADO15069 1562 aa34.8■■■■□ 3.16
FKRP-225ENST00000601299 DNAJC5BQ9UF47 199 aa34.7■■■■□ 3.15
FKRP-225ENST00000601299 PABPN1Q86U42 306 aaKnown RBP eCLIP34.47■■■■□ 3.11
FKRP-225ENST00000601299 MYO15BQ96JP2 1530 aa34.3■■■■□ 3.08
FKRP-225ENST00000601299 ZCCHC6Q5VYS8 1495 aaKnown RBP34.3■■■■□ 3.08
FKRP-225ENST00000601299 UNC13AQ9UPW8 1703 aa34.14■■■■□ 3.06
FKRP-225ENST00000601299 DCAF1Q9Y4B6 1507 aa34.07■■■■□ 3.04
FKRP-225ENST00000601299 BICRAQ9NZM4 1560 aa34.03■■■■□ 3.04
FKRP-225ENST00000601299 SCRIBQ14160 1630 aa33.6■■■□□ 2.97
FKRP-225ENST00000601299 SHROOM4Q9ULL8 1493 aa33.5■■■□□ 2.95
FKRP-225ENST00000601299 CC2D2AQ9P2K1 1620 aa33.26■■■□□ 2.91
FKRP-225ENST00000601299 CECR2Q9BXF3 1484 aa33.23■■■□□ 2.91
FKRP-225ENST00000601299 EIF4G1Q04637 1599 aaKnown RBP33.19■■■□□ 2.9
FKRP-225ENST00000601299 NCAPD3P42695 1498 aa32.19■■■□□ 2.74
FKRP-225ENST00000601299 ATAD2BQ9ULI0 1458 aa32.1■■■□□ 2.73
FKRP-225ENST00000601299 SMARCA4P51532 1647 aa32.06■■■□□ 2.72
FKRP-225ENST00000601299 BAZ1AQ9NRL2 1556 aaPredicted RBP32.01■■■□□ 2.71
FKRP-225ENST00000601299 SMARCA2P51531 1590 aa31.96■■■□□ 2.71
FKRP-225ENST00000601299 HMGXB3Q12766 1538 aa31.88■■■□□ 2.69
FKRP-225ENST00000601299 ERCC6Q03468 1493 aa31.85■■■□□ 2.69
FKRP-225ENST00000601299 DNAJC5Q9H3Z4 198 aa31.8■■■□□ 2.68
FKRP-225ENST00000601299 BAZ1BQ9UIG0 1483 aaKnown RBP31.78■■■□□ 2.68
FKRP-225ENST00000601299 MROH2BQ7Z745 1585 aa31.78■■■□□ 2.68
FKRP-225ENST00000601299 CUX2O14529 1486 aa31.73■■■□□ 2.67
FKRP-225ENST00000601299 NESP48681 1621 aa31.72■■■□□ 2.67
FKRP-225ENST00000601299 PEG3Q9GZU2 1588 aa31.68■■■□□ 2.66
FKRP-225ENST00000601299 WIZO95785 1651 aa31.46■■■□□ 2.63
FKRP-225ENST00000601299 LAMC3Q9Y6N6 1575 aa31.39■■■□□ 2.61
FKRP-225ENST00000601299 RSF1Q96T23 1441 aaPredicted RBP31.35■■■□□ 2.61
FKRP-225ENST00000601299 PDS5BQ9NTI5 1447 aa31.29■■■□□ 2.6
FKRP-225ENST00000601299 THOC2Q8NI27 1593 aaKnown RBP31.27■■■□□ 2.6
FKRP-225ENST00000601299 CADPSQ9ULU8 1353 aa31.25■■■□□ 2.59
FKRP-225ENST00000601299 KIF21AQ7Z4S6 1674 aa31.17■■■□□ 2.58
FKRP-225ENST00000601299 TOP2AP11388 1531 aaKnown RBP31.1■■■□□ 2.57
FKRP-225ENST00000601299 MRC2Q9UBG0 1479 aa31■■■□□ 2.55
FKRP-225ENST00000601299 FANCD2Q9BXW9 1451 aa30.88■■■□□ 2.53
FKRP-225ENST00000601299 CEP164Q9UPV0 1460 aa30.88■■■□□ 2.53
FKRP-225ENST00000601299 WDR62O43379 1518 aa30.88■■■□□ 2.53
FKRP-225ENST00000601299 CFTRP13569 1480 aa30.86■■■□□ 2.53
FKRP-225ENST00000601299 CCDC88BA6NC98 1476 aa30.74■■■□□ 2.51
FKRP-225ENST00000601299 URB2Q14146 1524 aaKnown RBP30.62■■■□□ 2.49
FKRP-225ENST00000601299 SUPT5HO00267 1087 aaKnown RBP30.57■■■□□ 2.48
FKRP-225ENST00000601299 PRDM2Q13029 1718 aa30.54■■■□□ 2.48
FKRP-225ENST00000601299 TRIM41Q8WV44 630 aa30.47■■■□□ 2.47
FKRP-225ENST00000601299 OSCARQ8IYS5 282 aa30.4■■■□□ 2.46
FKRP-225ENST00000601299 TOPBP1Q92547 1522 aa30.27■■■□□ 2.44
FKRP-225ENST00000601299 IFT140Q96RY7 1462 aa30.27■■■□□ 2.44
FKRP-225ENST00000601299 ZNF608Q9ULD9 1512 aaPredicted RBP30.26■■■□□ 2.43
FKRP-225ENST00000601299 ABCC8Q09428 1581 aa30.17■■■□□ 2.42
FKRP-225ENST00000601299 DNMBPQ6XZF7 1577 aa30.12■■■□□ 2.41
FKRP-225ENST00000601299 AQRO60306 1485 aaKnown RBP eCLIP30.01■■■□□ 2.4
FKRP-225ENST00000601299 EIF4G3O43432 1585 aaKnown RBP29.99■■■□□ 2.39
FKRP-225ENST00000601299 POLA1P09884 1462 aaPredicted RBP29.97■■■□□ 2.39
FKRP-225ENST00000601299 TARBP1Q13395 1621 aaKnown RBP29.95■■■□□ 2.38
FKRP-225ENST00000601299 RAD54L2Q9Y4B4 1467 aa29.92■■■□□ 2.38
FKRP-225ENST00000601299 SOGA1O94964 1423 aa29.89■■■□□ 2.38
FKRP-225ENST00000601299 FBLN2P98095 1184 aa29.88■■■□□ 2.37
FKRP-225ENST00000601299 RIMBP3CA6NJZ7 1639 aa29.88■■■□□ 2.37
FKRP-225ENST00000601299 RIMBP3BA6NNM3 1639 aa29.88■■■□□ 2.37
FKRP-225ENST00000601299 RIMBP3Q9UFD9 1639 aa29.88■■■□□ 2.37
FKRP-225ENST00000601299 TDRD9Q8NDG6 1382 aaKnown RBP29.86■■■□□ 2.37
FKRP-225ENST00000601299 CUX1P39880 1505 aa29.83■■■□□ 2.37
FKRP-225ENST00000601299 ARHGEF11O15085 1522 aa29.81■■■□□ 2.36
FKRP-225ENST00000601299 FGD5Q6ZNL6 1462 aa29.8■■■□□ 2.36
FKRP-225ENST00000601299 CYB5RLQ6IPT4 315 aa29.73■■■□□ 2.35
FKRP-225ENST00000601299 CHD1O14646 1710 aa29.73■■■□□ 2.35
FKRP-225ENST00000601299 SNAPC4Q5SXM2 1469 aa29.67■■■□□ 2.34
FKRP-225ENST00000601299 CHMP7Q8WUX9 453 aaPredicted RBP29.63■■■□□ 2.33
FKRP-225ENST00000601299 WRNQ14191 1432 aaPredicted RBP eCLIP29.62■■■□□ 2.33
FKRP-225ENST00000601299 WDR97A6NE52 1622 aa29.58■■■□□ 2.33
FKRP-225ENST00000601299 GRIN2BQ13224 1484 aa29.58■■■□□ 2.33
FKRP-225ENST00000601299 ARAP1Q96P48 1450 aa29.55■■■□□ 2.32
FKRP-225ENST00000601299 MAGI1Q96QZ7 1491 aaPredicted RBP29.55■■■□□ 2.32
FKRP-225ENST00000601299 TOP2BQ02880 1626 aa29.53■■■□□ 2.32
FKRP-225ENST00000601299 BIVM-ERCC5R4GMW8 1640 aa29.53■■■□□ 2.32
FKRP-225ENST00000601299 SYNJ1O43426 1573 aa29.52■■■□□ 2.32
FKRP-225ENST00000601299 GAPVD1Q14C86 1478 aa29.49■■■□□ 2.31
FKRP-225ENST00000601299 SYNJ2O15056 1496 aa29.47■■■□□ 2.31
FKRP-225ENST00000601299 ABCA10Q8WWZ4 1543 aa29.46■■■□□ 2.31
FKRP-225ENST00000601299 CLASP1Q7Z460 1538 aa29.45■■■□□ 2.3
FKRP-225ENST00000601299 TRHP20396 242 aaPredicted RBP29.39■■■□□ 2.3
FKRP-225ENST00000601299 PBRM1Q86U86 1689 aa29.38■■■□□ 2.29
FKRP-225ENST00000601299 ABCA5Q8WWZ7 1642 aa29.35■■■□□ 2.29
FKRP-225ENST00000601299 GRIN2AQ12879 1464 aa29.18■■■□□ 2.26
FKRP-225ENST00000601299 ADAMTS12P58397 1594 aa29.13■■■□□ 2.25
FKRP-225ENST00000601299 FHAD1B1AJZ9 1412 aa29.12■■■□□ 2.25
FKRP-225ENST00000601299 ERICH3Q5RHP9 1530 aa29.12■■■□□ 2.25
FKRP-225ENST00000601299 NUP160Q12769 1436 aa29.1■■■□□ 2.25
FKRP-225ENST00000601299 CEP170Q5SW79 1584 aa29.07■■■□□ 2.24
FKRP-225ENST00000601299 ERCC6L2Q5T890 1561 aa29.05■■■□□ 2.24
FKRP-225ENST00000601299 KIF27Q86VH2 1401 aa29.03■■■□□ 2.24
FKRP-225ENST00000601299 JPH4Q96JJ6 628 aa28.89■■■□□ 2.22
FKRP-225ENST00000601299 IGF1RP08069 1367 aa28.88■■■□□ 2.21
FKRP-225ENST00000601299 SHROOM2Q13796 1616 aa28.88■■■□□ 2.21
FKRP-225ENST00000601299 PRG4Q92954 1404 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms