RNA–Protein interactions for RNA: ENST00000601213.5

GTPBP3-224, Transcript of GTP binding protein 3, mitochondrial, humanhuman

TSL 4

Gene GTPBP3, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTPBP3-224ENST00000601213 NISCHQ9Y2I1 1504 aa43.45■■■■■ 4.55
GTPBP3-224ENST00000601213 CCDC180Q9P1Z9 1646 aa38.89■■■■□ 3.82
GTPBP3-224ENST00000601213 ABCC9O60706 1549 aa38.31■■■■□ 3.72
GTPBP3-224ENST00000601213 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
GTPBP3-224ENST00000601213 NACADO15069 1562 aa36.54■■■■□ 3.44
GTPBP3-224ENST00000601213 DCAF8L2P0C7V8 631 aa36.28■■■■□ 3.4
GTPBP3-224ENST00000601213 MYO15BQ96JP2 1530 aa36.19■■■■□ 3.38
GTPBP3-224ENST00000601213 ZCCHC6Q5VYS8 1495 aaKnown RBP36.16■■■■□ 3.38
GTPBP3-224ENST00000601213 UNC13AQ9UPW8 1703 aa36.06■■■■□ 3.36
GTPBP3-224ENST00000601213 DCAF1Q9Y4B6 1507 aa35.92■■■■□ 3.34
GTPBP3-224ENST00000601213 BICRAQ9NZM4 1560 aa35.68■■■■□ 3.3
GTPBP3-224ENST00000601213 PABPN1Q86U42 306 aaKnown RBP eCLIP35.65■■■■□ 3.3
GTPBP3-224ENST00000601213 SCRIBQ14160 1630 aa35.44■■■■□ 3.26
GTPBP3-224ENST00000601213 DNAJC5BQ9UF47 199 aa35.44■■■■□ 3.26
GTPBP3-224ENST00000601213 SHROOM4Q9ULL8 1493 aa35.16■■■■□ 3.22
GTPBP3-224ENST00000601213 EIF4G1Q04637 1599 aaKnown RBP34.72■■■■□ 3.15
GTPBP3-224ENST00000601213 CC2D2AQ9P2K1 1620 aa34.68■■■■□ 3.14
GTPBP3-224ENST00000601213 CECR2Q9BXF3 1484 aa34.43■■■■□ 3.1
GTPBP3-224ENST00000601213 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
GTPBP3-224ENST00000601213 BAZ1AQ9NRL2 1556 aaPredicted RBP33.7■■■□□ 2.99
GTPBP3-224ENST00000601213 NCAPD3P42695 1498 aa33.69■■■□□ 2.98
GTPBP3-224ENST00000601213 ATAD2BQ9ULI0 1458 aa33.69■■■□□ 2.98
GTPBP3-224ENST00000601213 SMARCA2P51531 1590 aa33.63■■■□□ 2.97
GTPBP3-224ENST00000601213 HMGXB3Q12766 1538 aa33.57■■■□□ 2.96
GTPBP3-224ENST00000601213 MROH2BQ7Z745 1585 aa33.51■■■□□ 2.96
GTPBP3-224ENST00000601213 PEG3Q9GZU2 1588 aa33.51■■■□□ 2.95
GTPBP3-224ENST00000601213 BAZ1BQ9UIG0 1483 aaKnown RBP33.39■■■□□ 2.94
GTPBP3-224ENST00000601213 WIZO95785 1651 aa33.19■■■□□ 2.9
GTPBP3-224ENST00000601213 NESP48681 1621 aa33.08■■■□□ 2.89
GTPBP3-224ENST00000601213 ERCC6Q03468 1493 aa32.99■■■□□ 2.87
GTPBP3-224ENST00000601213 RSF1Q96T23 1441 aaPredicted RBP32.94■■■□□ 2.86
GTPBP3-224ENST00000601213 LAMC3Q9Y6N6 1575 aa32.92■■■□□ 2.86
GTPBP3-224ENST00000601213 CUX2O14529 1486 aa32.8■■■□□ 2.84
GTPBP3-224ENST00000601213 KIF21AQ7Z4S6 1674 aa32.77■■■□□ 2.84
GTPBP3-224ENST00000601213 TOP2AP11388 1531 aaKnown RBP32.77■■■□□ 2.84
GTPBP3-224ENST00000601213 THOC2Q8NI27 1593 aaKnown RBP32.73■■■□□ 2.83
GTPBP3-224ENST00000601213 CADPSQ9ULU8 1353 aa32.66■■■□□ 2.82
GTPBP3-224ENST00000601213 PDS5BQ9NTI5 1447 aa32.6■■■□□ 2.81
GTPBP3-224ENST00000601213 CFTRP13569 1480 aa32.43■■■□□ 2.78
GTPBP3-224ENST00000601213 MRC2Q9UBG0 1479 aa32.37■■■□□ 2.77
GTPBP3-224ENST00000601213 PRDM2Q13029 1718 aa32.36■■■□□ 2.77
GTPBP3-224ENST00000601213 FANCD2Q9BXW9 1451 aa32.35■■■□□ 2.77
GTPBP3-224ENST00000601213 CEP164Q9UPV0 1460 aa32.34■■■□□ 2.77
GTPBP3-224ENST00000601213 WDR62O43379 1518 aa32.33■■■□□ 2.77
GTPBP3-224ENST00000601213 CCDC88BA6NC98 1476 aa32.33■■■□□ 2.77
GTPBP3-224ENST00000601213 DNAJC5Q9H3Z4 198 aa32.12■■■□□ 2.73
GTPBP3-224ENST00000601213 URB2Q14146 1524 aaKnown RBP32.09■■■□□ 2.73
GTPBP3-224ENST00000601213 TOPBP1Q92547 1522 aa31.82■■■□□ 2.68
GTPBP3-224ENST00000601213 DNMBPQ6XZF7 1577 aa31.77■■■□□ 2.68
GTPBP3-224ENST00000601213 SUPT5HO00267 1087 aaKnown RBP31.74■■■□□ 2.67
GTPBP3-224ENST00000601213 ABCC8Q09428 1581 aa31.69■■■□□ 2.66
GTPBP3-224ENST00000601213 IFT140Q96RY7 1462 aa31.65■■■□□ 2.66
GTPBP3-224ENST00000601213 ZNF608Q9ULD9 1512 aaPredicted RBP31.6■■■□□ 2.65
GTPBP3-224ENST00000601213 TARBP1Q13395 1621 aaKnown RBP31.55■■■□□ 2.64
GTPBP3-224ENST00000601213 EIF4G3O43432 1585 aaKnown RBP31.53■■■□□ 2.64
GTPBP3-224ENST00000601213 POLA1P09884 1462 aaPredicted RBP31.52■■■□□ 2.64
GTPBP3-224ENST00000601213 CUX1P39880 1505 aa31.47■■■□□ 2.63
GTPBP3-224ENST00000601213 FGD5Q6ZNL6 1462 aa31.4■■■□□ 2.62
GTPBP3-224ENST00000601213 RAD54L2Q9Y4B4 1467 aa31.38■■■□□ 2.61
GTPBP3-224ENST00000601213 AQRO60306 1485 aaKnown RBP eCLIP31.33■■■□□ 2.613e-8■■■■■ 31.4
GTPBP3-224ENST00000601213 SOGA1O94964 1423 aa31.3■■■□□ 2.6
GTPBP3-224ENST00000601213 WDR97A6NE52 1622 aa31.28■■■□□ 2.6
GTPBP3-224ENST00000601213 CHD1O14646 1710 aa31.25■■■□□ 2.59
GTPBP3-224ENST00000601213 OSCARQ8IYS5 282 aa31.24■■■□□ 2.59
GTPBP3-224ENST00000601213 TDRD9Q8NDG6 1382 aaKnown RBP31.18■■■□□ 2.58
GTPBP3-224ENST00000601213 BIVM-ERCC5R4GMW8 1640 aa31.15■■■□□ 2.58
GTPBP3-224ENST00000601213 SYNJ1O43426 1573 aa31.12■■■□□ 2.57
GTPBP3-224ENST00000601213 TOP2BQ02880 1626 aa31.1■■■□□ 2.57
GTPBP3-224ENST00000601213 PBRM1Q86U86 1689 aa31.09■■■□□ 2.57
GTPBP3-224ENST00000601213 SNAPC4Q5SXM2 1469 aa31.08■■■□□ 2.57
GTPBP3-224ENST00000601213 WRNQ14191 1432 aaPredicted RBP eCLIP31.06■■■□□ 2.56
GTPBP3-224ENST00000601213 ABCA5Q8WWZ7 1642 aa31.06■■■□□ 2.56
GTPBP3-224ENST00000601213 ABCA10Q8WWZ4 1543 aa31.05■■■□□ 2.56
GTPBP3-224ENST00000601213 GRIN2BQ13224 1484 aa31.01■■■□□ 2.55
GTPBP3-224ENST00000601213 RIMBP3CA6NJZ7 1639 aa31■■■□□ 2.55
GTPBP3-224ENST00000601213 RIMBP3BA6NNM3 1639 aa31■■■□□ 2.55
GTPBP3-224ENST00000601213 RIMBP3Q9UFD9 1639 aa31■■■□□ 2.55
GTPBP3-224ENST00000601213 MAGI1Q96QZ7 1491 aaPredicted RBP30.98■■■□□ 2.55
GTPBP3-224ENST00000601213 GAPVD1Q14C86 1478 aa30.97■■■□□ 2.55
GTPBP3-224ENST00000601213 TRIM41Q8WV44 630 aa30.93■■■□□ 2.54
GTPBP3-224ENST00000601213 FBLN2P98095 1184 aa30.92■■■□□ 2.54
GTPBP3-224ENST00000601213 ARHGEF11O15085 1522 aa30.92■■■□□ 2.54
GTPBP3-224ENST00000601213 SYNJ2O15056 1496 aa30.87■■■□□ 2.53
GTPBP3-224ENST00000601213 CLASP1Q7Z460 1538 aa30.83■■■□□ 2.53
GTPBP3-224ENST00000601213 ADAMTS12P58397 1594 aa30.78■■■□□ 2.52
GTPBP3-224ENST00000601213 CHMP7Q8WUX9 453 aaPredicted RBP30.77■■■□□ 2.52
GTPBP3-224ENST00000601213 ERICH3Q5RHP9 1530 aa30.67■■■□□ 2.5
GTPBP3-224ENST00000601213 GRIN2AQ12879 1464 aa30.65■■■□□ 2.5
GTPBP3-224ENST00000601213 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
GTPBP3-224ENST00000601213 CEP170Q5SW79 1584 aa30.58■■■□□ 2.49
GTPBP3-224ENST00000601213 FHAD1B1AJZ9 1412 aa30.58■■■□□ 2.49
GTPBP3-224ENST00000601213 NUP160Q12769 1436 aa30.52■■■□□ 2.48
GTPBP3-224ENST00000601213 CYB5RLQ6IPT4 315 aa30.5■■■□□ 2.47
GTPBP3-224ENST00000601213 SHROOM2Q13796 1616 aa30.41■■■□□ 2.46
GTPBP3-224ENST00000601213 ERCC6L2Q5T890 1561 aa30.41■■■□□ 2.46
GTPBP3-224ENST00000601213 KIF27Q86VH2 1401 aa30.4■■■□□ 2.46
GTPBP3-224ENST00000601213 CUL7Q14999 1698 aa30.38■■■□□ 2.45
GTPBP3-224ENST00000601213 RUSC2Q8N2Y8 1516 aa30.34■■■□□ 2.45
GTPBP3-224ENST00000601213 IGF1RP08069 1367 aa30.31■■■□□ 2.44
GTPBP3-224ENST00000601213 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms