RNA–Protein interactions for RNA: ENST00000601194.1

PSMC4-205, Transcript of proteasome 26S subunit, ATPase 4, humanhuman

TSL 3

Gene PSMC4, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC4-205ENST00000601194 NISCHQ9Y2I1 1504 aa34.82■■■■□ 3.16
PSMC4-205ENST00000601194 CCDC180Q9P1Z9 1646 aa30.95■■■□□ 2.54
PSMC4-205ENST00000601194 ABCC9O60706 1549 aa30.3■■■□□ 2.44
PSMC4-205ENST00000601194 RB1CC1Q8TDY2 1594 aa29.13■■■□□ 2.25
PSMC4-205ENST00000601194 NACADO15069 1562 aa29.11■■■□□ 2.25
PSMC4-205ENST00000601194 DCAF8L2P0C7V8 631 aa29.03■■■□□ 2.24
PSMC4-205ENST00000601194 ZCCHC6Q5VYS8 1495 aaKnown RBP29.02■■■□□ 2.24
PSMC4-205ENST00000601194 MYO15BQ96JP2 1530 aa28.96■■■□□ 2.23
PSMC4-205ENST00000601194 DCAF1Q9Y4B6 1507 aa28.82■■■□□ 2.2
PSMC4-205ENST00000601194 UNC13AQ9UPW8 1703 aa28.44■■■□□ 2.14
PSMC4-205ENST00000601194 PABPN1Q86U42 306 aaKnown RBP eCLIP28.31■■■□□ 2.12
PSMC4-205ENST00000601194 BICRAQ9NZM4 1560 aa28.28■■■□□ 2.12
PSMC4-205ENST00000601194 SCRIBQ14160 1630 aa28.24■■■□□ 2.11
PSMC4-205ENST00000601194 SHROOM4Q9ULL8 1493 aa28■■■□□ 2.07
PSMC4-205ENST00000601194 DNAJC5BQ9UF47 199 aa27.85■■■□□ 2.05
PSMC4-205ENST00000601194 EIF4G1Q04637 1599 aaKnown RBP27.52■■■□□ 2
PSMC4-205ENST00000601194 CC2D2AQ9P2K1 1620 aa27.41■■□□□ 1.98
PSMC4-205ENST00000601194 CECR2Q9BXF3 1484 aa27.24■■□□□ 1.95
PSMC4-205ENST00000601194 SMARCA4P51532 1647 aa27.01■■□□□ 1.92
PSMC4-205ENST00000601194 BAZ1AQ9NRL2 1556 aaPredicted RBP26.98■■□□□ 1.91
PSMC4-205ENST00000601194 NCAPD3P42695 1498 aa26.88■■□□□ 1.89
PSMC4-205ENST00000601194 ATAD2BQ9ULI0 1458 aa26.88■■□□□ 1.89
PSMC4-205ENST00000601194 SMARCA2P51531 1590 aa26.84■■□□□ 1.89
PSMC4-205ENST00000601194 MROH2BQ7Z745 1585 aa26.84■■□□□ 1.89
PSMC4-205ENST00000601194 PEG3Q9GZU2 1588 aa26.77■■□□□ 1.88
PSMC4-205ENST00000601194 HMGXB3Q12766 1538 aa26.74■■□□□ 1.87
PSMC4-205ENST00000601194 BAZ1BQ9UIG0 1483 aaKnown RBP26.65■■□□□ 1.86
PSMC4-205ENST00000601194 RSF1Q96T23 1441 aaPredicted RBP26.54■■□□□ 1.84
PSMC4-205ENST00000601194 WIZO95785 1651 aa26.52■■□□□ 1.84
PSMC4-205ENST00000601194 TOP2AP11388 1531 aaKnown RBP26.26■■□□□ 1.79
PSMC4-205ENST00000601194 NESP48681 1621 aa26.23■■□□□ 1.79
PSMC4-205ENST00000601194 LAMC3Q9Y6N6 1575 aa26.15■■□□□ 1.78
PSMC4-205ENST00000601194 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
PSMC4-205ENST00000601194 CADPSQ9ULU8 1353 aa26.08■■□□□ 1.77
PSMC4-205ENST00000601194 PDS5BQ9NTI5 1447 aa25.97■■□□□ 1.75
PSMC4-205ENST00000601194 CCDC88BA6NC98 1476 aa25.95■■□□□ 1.74
PSMC4-205ENST00000601194 CFTRP13569 1480 aa25.94■■□□□ 1.74
PSMC4-205ENST00000601194 KIF21AQ7Z4S6 1674 aa25.88■■□□□ 1.73
PSMC4-205ENST00000601194 CUX2O14529 1486 aa25.86■■□□□ 1.73
PSMC4-205ENST00000601194 THOC2Q8NI27 1593 aaKnown RBP25.84■■□□□ 1.73
PSMC4-205ENST00000601194 SUPT5HO00267 1087 aaKnown RBP25.79■■□□□ 1.72
PSMC4-205ENST00000601194 FANCD2Q9BXW9 1451 aa25.79■■□□□ 1.72
PSMC4-205ENST00000601194 CEP164Q9UPV0 1460 aa25.75■■□□□ 1.71
PSMC4-205ENST00000601194 MRC2Q9UBG0 1479 aa25.72■■□□□ 1.71
PSMC4-205ENST00000601194 PRDM2Q13029 1718 aa25.67■■□□□ 1.7
PSMC4-205ENST00000601194 WDR62O43379 1518 aa25.65■■□□□ 1.7
PSMC4-205ENST00000601194 URB2Q14146 1524 aaKnown RBP25.54■■□□□ 1.68
PSMC4-205ENST00000601194 TOPBP1Q92547 1522 aa25.37■■□□□ 1.65
PSMC4-205ENST00000601194 ABCC8Q09428 1581 aa25.35■■□□□ 1.65
PSMC4-205ENST00000601194 DNMBPQ6XZF7 1577 aa25.33■■□□□ 1.65
PSMC4-205ENST00000601194 IFT140Q96RY7 1462 aa25.21■■□□□ 1.63
PSMC4-205ENST00000601194 CUX1P39880 1505 aa25.18■■□□□ 1.62
PSMC4-205ENST00000601194 POLA1P09884 1462 aaPredicted RBP25.16■■□□□ 1.62
PSMC4-205ENST00000601194 ZNF608Q9ULD9 1512 aaPredicted RBP25.12■■□□□ 1.61
PSMC4-205ENST00000601194 TARBP1Q13395 1621 aaKnown RBP25.1■■□□□ 1.61
PSMC4-205ENST00000601194 FGD5Q6ZNL6 1462 aa25.09■■□□□ 1.61
PSMC4-205ENST00000601194 DNAJC5Q9H3Z4 198 aa25.08■■□□□ 1.61
PSMC4-205ENST00000601194 RAD54L2Q9Y4B4 1467 aa25.04■■□□□ 1.6
PSMC4-205ENST00000601194 SOGA1O94964 1423 aa25.03■■□□□ 1.6
PSMC4-205ENST00000601194 WRNQ14191 1432 aaPredicted RBP eCLIP25■■□□□ 1.59
PSMC4-205ENST00000601194 EIF4G3O43432 1585 aaKnown RBP25■■□□□ 1.59
PSMC4-205ENST00000601194 AQRO60306 1485 aaKnown RBP eCLIP24.96■■□□□ 1.594e-8■■□□□ 13.7
PSMC4-205ENST00000601194 TOP2BQ02880 1626 aa24.95■■□□□ 1.58
PSMC4-205ENST00000601194 SYNJ1O43426 1573 aa24.95■■□□□ 1.58
PSMC4-205ENST00000601194 BIVM-ERCC5R4GMW8 1640 aa24.94■■□□□ 1.58
PSMC4-205ENST00000601194 TDRD9Q8NDG6 1382 aaKnown RBP24.91■■□□□ 1.58
PSMC4-205ENST00000601194 WDR97A6NE52 1622 aa24.89■■□□□ 1.57
PSMC4-205ENST00000601194 ABCA10Q8WWZ4 1543 aa24.85■■□□□ 1.57
PSMC4-205ENST00000601194 OSCARQ8IYS5 282 aa24.76■■□□□ 1.55
PSMC4-205ENST00000601194 GRIN2BQ13224 1484 aa24.76■■□□□ 1.55
PSMC4-205ENST00000601194 GAPVD1Q14C86 1478 aa24.76■■□□□ 1.55
PSMC4-205ENST00000601194 ABCA5Q8WWZ7 1642 aa24.75■■□□□ 1.55
PSMC4-205ENST00000601194 SNAPC4Q5SXM2 1469 aa24.73■■□□□ 1.55
PSMC4-205ENST00000601194 MAGI1Q96QZ7 1491 aaPredicted RBP24.7■■□□□ 1.55
PSMC4-205ENST00000601194 PBRM1Q86U86 1689 aa24.67■■□□□ 1.54
PSMC4-205ENST00000601194 CHD1O14646 1710 aa24.65■■□□□ 1.54
PSMC4-205ENST00000601194 FBLN2P98095 1184 aa24.62■■□□□ 1.53
PSMC4-205ENST00000601194 SYNJ2O15056 1496 aa24.61■■□□□ 1.53
PSMC4-205ENST00000601194 CHMP7Q8WUX9 453 aaPredicted RBP24.56■■□□□ 1.52
PSMC4-205ENST00000601194 ERICH3Q5RHP9 1530 aa24.55■■□□□ 1.52
PSMC4-205ENST00000601194 ADAMTS12P58397 1594 aa24.52■■□□□ 1.52
PSMC4-205ENST00000601194 KIF27Q86VH2 1401 aa24.48■■□□□ 1.51
PSMC4-205ENST00000601194 FHAD1B1AJZ9 1412 aa24.47■■□□□ 1.51
PSMC4-205ENST00000601194 GRIN2AQ12879 1464 aa24.45■■□□□ 1.5
PSMC4-205ENST00000601194 CLASP1Q7Z460 1538 aa24.44■■□□□ 1.5
PSMC4-205ENST00000601194 IGF1RP08069 1367 aa24.4■■□□□ 1.5
PSMC4-205ENST00000601194 ARHGEF11O15085 1522 aa24.39■■□□□ 1.49
PSMC4-205ENST00000601194 RIMBP3CA6NJZ7 1639 aa24.37■■□□□ 1.49
PSMC4-205ENST00000601194 RIMBP3BA6NNM3 1639 aa24.37■■□□□ 1.49
PSMC4-205ENST00000601194 RIMBP3Q9UFD9 1639 aa24.37■■□□□ 1.49
PSMC4-205ENST00000601194 TRIM41Q8WV44 630 aa24.36■■□□□ 1.49
PSMC4-205ENST00000601194 NUP160Q12769 1436 aa24.35■■□□□ 1.49
PSMC4-205ENST00000601194 CEP170Q5SW79 1584 aa24.33■■□□□ 1.48
PSMC4-205ENST00000601194 CUL7Q14999 1698 aa24.3■■□□□ 1.48
PSMC4-205ENST00000601194 RUSC2Q8N2Y8 1516 aa24.25■■□□□ 1.47
PSMC4-205ENST00000601194 CARMIL1Q5VZK9 1371 aa24.23■■□□□ 1.47
PSMC4-205ENST00000601194 ARAP1Q96P48 1450 aa24.2■■□□□ 1.47
PSMC4-205ENST00000601194 SHROOM2Q13796 1616 aa24.15■■□□□ 1.46
PSMC4-205ENST00000601194 CYB5RLQ6IPT4 315 aa24.14■■□□□ 1.45
PSMC4-205ENST00000601194 KIAA0586Q9BVV6 1533 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms