RNA–Protein interactions for RNA: ENST00000601138.5

ZNF546-208, Transcript of zinc finger protein 546, humanhuman

TSL 5

Gene ZNF546, Length 561 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF546-208ENST00000601138 NISCHQ9Y2I1 1504 aa21.46■■□□□ 1.03
ZNF546-208ENST00000601138 ABCC9O60706 1549 aa20.69■□□□□ 0.9
ZNF546-208ENST00000601138 DNAJC5BQ9UF47 199 aa20.3■□□□□ 0.84
ZNF546-208ENST00000601138 CCDC180Q9P1Z9 1646 aa19.8■□□□□ 0.76
ZNF546-208ENST00000601138 DNAJC5Q9H3Z4 198 aa19.45■□□□□ 0.7
ZNF546-208ENST00000601138 RB1CC1Q8TDY2 1594 aa19.32■□□□□ 0.68
ZNF546-208ENST00000601138 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
ZNF546-208ENST00000601138 UNC13AQ9UPW8 1703 aa18.94■□□□□ 0.62
ZNF546-208ENST00000601138 NACADO15069 1562 aa18.93■□□□□ 0.62
ZNF546-208ENST00000601138 CECR2Q9BXF3 1484 aa18.77■□□□□ 0.6
ZNF546-208ENST00000601138 BICRAQ9NZM4 1560 aa18.76■□□□□ 0.59
ZNF546-208ENST00000601138 CC2D2AQ9P2K1 1620 aa18.7■□□□□ 0.58
ZNF546-208ENST00000601138 DCAF8L2P0C7V8 631 aa18.48■□□□□ 0.55
ZNF546-208ENST00000601138 SHROOM4Q9ULL8 1493 aa18.45■□□□□ 0.54
ZNF546-208ENST00000601138 EIF4G1Q04637 1599 aaKnown RBP18.39■□□□□ 0.53
ZNF546-208ENST00000601138 MYO15BQ96JP2 1530 aa18.33■□□□□ 0.52
ZNF546-208ENST00000601138 CUX2O14529 1486 aa18.32■□□□□ 0.52
ZNF546-208ENST00000601138 TRIM41Q8WV44 630 aa18.12■□□□□ 0.49
ZNF546-208ENST00000601138 ERCC6Q03468 1493 aa17.97■□□□□ 0.47
ZNF546-208ENST00000601138 SCRIBQ14160 1630 aa17.9■□□□□ 0.46
ZNF546-208ENST00000601138 DCAF1Q9Y4B6 1507 aa17.71■□□□□ 0.43
ZNF546-208ENST00000601138 THOC2Q8NI27 1593 aaKnown RBP17.57■□□□□ 0.4
ZNF546-208ENST00000601138 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
ZNF546-208ENST00000601138 NESP48681 1621 aa17.47■□□□□ 0.39
ZNF546-208ENST00000601138 NCAPD3P42695 1498 aa17.45■□□□□ 0.38
ZNF546-208ENST00000601138 AEBP2Q6ZN18 517 aaPredicted RBP17.35■□□□□ 0.37
ZNF546-208ENST00000601138 SMARCA2P51531 1590 aa17.34■□□□□ 0.37
ZNF546-208ENST00000601138 BAZ1AQ9NRL2 1556 aaPredicted RBP17.33■□□□□ 0.37
ZNF546-208ENST00000601138 KIF21AQ7Z4S6 1674 aa17.3■□□□□ 0.36
ZNF546-208ENST00000601138 OSCARQ8IYS5 282 aa17.26■□□□□ 0.35
ZNF546-208ENST00000601138 LAMC3Q9Y6N6 1575 aa17.26■□□□□ 0.35
ZNF546-208ENST00000601138 HMGXB3Q12766 1538 aa17.26■□□□□ 0.35
ZNF546-208ENST00000601138 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
ZNF546-208ENST00000601138 RIMBP3CA6NJZ7 1639 aa17.21■□□□□ 0.35
ZNF546-208ENST00000601138 RIMBP3BA6NNM3 1639 aa17.21■□□□□ 0.35
ZNF546-208ENST00000601138 RIMBP3Q9UFD9 1639 aa17.21■□□□□ 0.35
ZNF546-208ENST00000601138 PDS5BQ9NTI5 1447 aa17.16■□□□□ 0.34
ZNF546-208ENST00000601138 WDR62O43379 1518 aa17.09■□□□□ 0.33
ZNF546-208ENST00000601138 MRC2Q9UBG0 1479 aa17.07■□□□□ 0.32
ZNF546-208ENST00000601138 TRHP20396 242 aaPredicted RBP17.06■□□□□ 0.32
ZNF546-208ENST00000601138 BAZ1BQ9UIG0 1483 aaKnown RBP17.02■□□□□ 0.32
ZNF546-208ENST00000601138 ARHGEF11O15085 1522 aa17.01■□□□□ 0.31
ZNF546-208ENST00000601138 SMARCA4P51532 1647 aa16.99■□□□□ 0.31
ZNF546-208ENST00000601138 CYB5RLQ6IPT4 315 aa16.91■□□□□ 0.3
ZNF546-208ENST00000601138 PEG3Q9GZU2 1588 aa16.85■□□□□ 0.29
ZNF546-208ENST00000601138 CADPSQ9ULU8 1353 aa16.85■□□□□ 0.29
ZNF546-208ENST00000601138 CEP164Q9UPV0 1460 aa16.8■□□□□ 0.28
ZNF546-208ENST00000601138 ILDR1Q86SU0 546 aaPredicted RBP16.79■□□□□ 0.28
ZNF546-208ENST00000601138 ARAP1Q96P48 1450 aa16.76■□□□□ 0.27
ZNF546-208ENST00000601138 FANCD2Q9BXW9 1451 aa16.67■□□□□ 0.26
ZNF546-208ENST00000601138 RSF1Q96T23 1441 aaPredicted RBP16.6■□□□□ 0.25
ZNF546-208ENST00000601138 URB2Q14146 1524 aaKnown RBP16.6■□□□□ 0.25
ZNF546-208ENST00000601138 CHD1O14646 1710 aa16.57■□□□□ 0.24
ZNF546-208ENST00000601138 ZNF608Q9ULD9 1512 aaPredicted RBP16.55■□□□□ 0.24
ZNF546-208ENST00000601138 IFT140Q96RY7 1462 aa16.5■□□□□ 0.23
ZNF546-208ENST00000601138 MROH2BQ7Z745 1585 aa16.5■□□□□ 0.23
ZNF546-208ENST00000601138 CFTRP13569 1480 aa16.46■□□□□ 0.23
ZNF546-208ENST00000601138 EIF4G3O43432 1585 aaKnown RBP16.46■□□□□ 0.23
ZNF546-208ENST00000601138 FBLN2P98095 1184 aa16.34■□□□□ 0.21
ZNF546-208ENST00000601138 PRDM2Q13029 1718 aa16.33■□□□□ 0.21
ZNF546-208ENST00000601138 CLASP1Q7Z460 1538 aa16.31■□□□□ 0.2
ZNF546-208ENST00000601138 WIZO95785 1651 aa16.29■□□□□ 0.2
ZNF546-208ENST00000601138 AQRO60306 1485 aaKnown RBP eCLIP16.26■□□□□ 0.19
ZNF546-208ENST00000601138 TOPBP1Q92547 1522 aa16.24■□□□□ 0.19
ZNF546-208ENST00000601138 SYNJ1O43426 1573 aa16.22■□□□□ 0.19
ZNF546-208ENST00000601138 KDM4FA0A1W2PPD8 638 aa16.22■□□□□ 0.19
ZNF546-208ENST00000601138 TARBP1Q13395 1621 aaKnown RBP16.22■□□□□ 0.19
ZNF546-208ENST00000601138 KIF13AQ9H1H9 1805 aa16.2■□□□□ 0.18
ZNF546-208ENST00000601138 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
ZNF546-208ENST00000601138 ABCC8Q09428 1581 aa16.17■□□□□ 0.18
ZNF546-208ENST00000601138 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
ZNF546-208ENST00000601138 DNMBPQ6XZF7 1577 aa16.12■□□□□ 0.17
ZNF546-208ENST00000601138 SNAPC4Q5SXM2 1469 aa16.08■□□□□ 0.16
ZNF546-208ENST00000601138 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
ZNF546-208ENST00000601138 FBXO41Q8TF61 875 aa16.03■□□□□ 0.16
ZNF546-208ENST00000601138 MAGI1Q96QZ7 1491 aaPredicted RBP16.03■□□□□ 0.16
ZNF546-208ENST00000601138 HECW2Q9P2P5 1572 aa16.02■□□□□ 0.16
ZNF546-208ENST00000601138 WDR97A6NE52 1622 aa16.01■□□□□ 0.15
ZNF546-208ENST00000601138 TOP2AP11388 1531 aaKnown RBP16.01■□□□□ 0.15
ZNF546-208ENST00000601138 POLA1P09884 1462 aaPredicted RBP16■□□□□ 0.15
ZNF546-208ENST00000601138 KDM6BO15054 1643 aa15.98■□□□□ 0.15
ZNF546-208ENST00000601138 TDRD9Q8NDG6 1382 aaKnown RBP15.98■□□□□ 0.15
ZNF546-208ENST00000601138 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
ZNF546-208ENST00000601138 LMTK3Q96Q04 1460 aa15.95■□□□□ 0.14
ZNF546-208ENST00000601138 RAD54L2Q9Y4B4 1467 aa15.93■□□□□ 0.14
ZNF546-208ENST00000601138 GRIN2BQ13224 1484 aa15.91■□□□□ 0.14
ZNF546-208ENST00000601138 SOGA1O94964 1423 aa15.9■□□□□ 0.14
ZNF546-208ENST00000601138 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
ZNF546-208ENST00000601138 FAM69CQ0P6D2 419 aa15.88■□□□□ 0.13
ZNF546-208ENST00000601138 ADGRL1O94910 1474 aa15.88■□□□□ 0.13
ZNF546-208ENST00000601138 CEP170Q5SW79 1584 aa15.84■□□□□ 0.13
ZNF546-208ENST00000601138 DIP2BQ9P265 1576 aa15.84■□□□□ 0.13
ZNF546-208ENST00000601138 TSPOAP1O95153 1857 aa15.84■□□□□ 0.13
ZNF546-208ENST00000601138 PBRM1Q86U86 1689 aa15.83■□□□□ 0.13
ZNF546-208ENST00000601138 SOCS7O14512 581 aa15.83■□□□□ 0.12
ZNF546-208ENST00000601138 CCDC88BA6NC98 1476 aa15.8■□□□□ 0.12
ZNF546-208ENST00000601138 MAPKBP1O60336 1514 aa15.79■□□□□ 0.12
ZNF546-208ENST00000601138 SHROOM2Q13796 1616 aa15.79■□□□□ 0.12
ZNF546-208ENST00000601138 FGD5Q6ZNL6 1462 aa15.75■□□□□ 0.11
ZNF546-208ENST00000601138 NPM1P06748 294 aaKnown RBP eCLIP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 268.2 ms