RNA–Protein interactions for RNA: ENST00000601054.1

SIPA1L3-210, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 4

Gene SIPA1L3, Length 572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-210ENST00000601054 NISCHQ9Y2I1 1504 aa43.03■■■■■ 4.48
SIPA1L3-210ENST00000601054 CCDC180Q9P1Z9 1646 aa38.56■■■■□ 3.76
SIPA1L3-210ENST00000601054 ABCC9O60706 1549 aa38.42■■■■□ 3.74
SIPA1L3-210ENST00000601054 RB1CC1Q8TDY2 1594 aa36.69■■■■□ 3.46
SIPA1L3-210ENST00000601054 NACADO15069 1562 aa36.49■■■■□ 3.43
SIPA1L3-210ENST00000601054 DCAF8L2P0C7V8 631 aa36.23■■■■□ 3.39
SIPA1L3-210ENST00000601054 MYO15BQ96JP2 1530 aa36.1■■■■□ 3.37
SIPA1L3-210ENST00000601054 DNAJC5BQ9UF47 199 aa35.97■■■■□ 3.35
SIPA1L3-210ENST00000601054 PABPN1Q86U42 306 aaKnown RBP eCLIP35.79■■■■□ 3.32
SIPA1L3-210ENST00000601054 ZCCHC6Q5VYS8 1495 aaKnown RBP35.68■■■■□ 3.3
SIPA1L3-210ENST00000601054 UNC13AQ9UPW8 1703 aa35.66■■■■□ 3.3
SIPA1L3-210ENST00000601054 DCAF1Q9Y4B6 1507 aa35.63■■■■□ 3.29
SIPA1L3-210ENST00000601054 BICRAQ9NZM4 1560 aa35.55■■■■□ 3.28
SIPA1L3-210ENST00000601054 SHROOM4Q9ULL8 1493 aa35.27■■■■□ 3.24
SIPA1L3-210ENST00000601054 SCRIBQ14160 1630 aa35.04■■■■□ 3.2
SIPA1L3-210ENST00000601054 CC2D2AQ9P2K1 1620 aa34.71■■■■□ 3.15
SIPA1L3-210ENST00000601054 EIF4G1Q04637 1599 aaKnown RBP34.7■■■■□ 3.14
SIPA1L3-210ENST00000601054 CECR2Q9BXF3 1484 aa34.66■■■■□ 3.14
SIPA1L3-210ENST00000601054 NCAPD3P42695 1498 aa33.72■■■□□ 2.99
SIPA1L3-210ENST00000601054 ATAD2BQ9ULI0 1458 aa33.56■■■□□ 2.96
SIPA1L3-210ENST00000601054 SMARCA2P51531 1590 aa33.51■■■□□ 2.95
SIPA1L3-210ENST00000601054 SMARCA4P51532 1647 aa33.5■■■□□ 2.95
SIPA1L3-210ENST00000601054 HMGXB3Q12766 1538 aa33.43■■■□□ 2.94
SIPA1L3-210ENST00000601054 BAZ1AQ9NRL2 1556 aaPredicted RBP33.41■■■□□ 2.94
SIPA1L3-210ENST00000601054 PEG3Q9GZU2 1588 aa33.26■■■□□ 2.91
SIPA1L3-210ENST00000601054 BAZ1BQ9UIG0 1483 aaKnown RBP33.24■■■□□ 2.91
SIPA1L3-210ENST00000601054 ERCC6Q03468 1493 aa33.22■■■□□ 2.91
SIPA1L3-210ENST00000601054 CUX2O14529 1486 aa33.19■■■□□ 2.9
SIPA1L3-210ENST00000601054 MROH2BQ7Z745 1585 aa33.11■■■□□ 2.89
SIPA1L3-210ENST00000601054 DNAJC5Q9H3Z4 198 aa33.07■■■□□ 2.88
SIPA1L3-210ENST00000601054 NESP48681 1621 aa33.01■■■□□ 2.87
SIPA1L3-210ENST00000601054 LAMC3Q9Y6N6 1575 aa32.88■■■□□ 2.85
SIPA1L3-210ENST00000601054 PDS5BQ9NTI5 1447 aa32.75■■■□□ 2.83
SIPA1L3-210ENST00000601054 CADPSQ9ULU8 1353 aa32.68■■■□□ 2.82
SIPA1L3-210ENST00000601054 THOC2Q8NI27 1593 aaKnown RBP32.67■■■□□ 2.82
SIPA1L3-210ENST00000601054 WIZO95785 1651 aa32.65■■■□□ 2.82
SIPA1L3-210ENST00000601054 KIF21AQ7Z4S6 1674 aa32.53■■■□□ 2.8
SIPA1L3-210ENST00000601054 RSF1Q96T23 1441 aaPredicted RBP32.51■■■□□ 2.79
SIPA1L3-210ENST00000601054 MRC2Q9UBG0 1479 aa32.41■■■□□ 2.78
SIPA1L3-210ENST00000601054 TOP2AP11388 1531 aaKnown RBP32.35■■■□□ 2.77
SIPA1L3-210ENST00000601054 CFTRP13569 1480 aa32.32■■■□□ 2.76
SIPA1L3-210ENST00000601054 WDR62O43379 1518 aa32.31■■■□□ 2.76
SIPA1L3-210ENST00000601054 CEP164Q9UPV0 1460 aa32.29■■■□□ 2.76
SIPA1L3-210ENST00000601054 FANCD2Q9BXW9 1451 aa32.26■■■□□ 2.75
SIPA1L3-210ENST00000601054 CCDC88BA6NC98 1476 aa31.97■■■□□ 2.71
SIPA1L3-210ENST00000601054 URB2Q14146 1524 aaKnown RBP31.95■■■□□ 2.71
SIPA1L3-210ENST00000601054 PRDM2Q13029 1718 aa31.84■■■□□ 2.69
SIPA1L3-210ENST00000601054 OSCARQ8IYS5 282 aa31.7■■■□□ 2.67
SIPA1L3-210ENST00000601054 ABCC8Q09428 1581 aa31.68■■■□□ 2.66
SIPA1L3-210ENST00000601054 IFT140Q96RY7 1462 aa31.67■■■□□ 2.66
SIPA1L3-210ENST00000601054 TOPBP1Q92547 1522 aa31.65■■■□□ 2.66
SIPA1L3-210ENST00000601054 TRIM41Q8WV44 630 aa31.55■■■□□ 2.64
SIPA1L3-210ENST00000601054 DNMBPQ6XZF7 1577 aa31.54■■■□□ 2.64
SIPA1L3-210ENST00000601054 ZNF608Q9ULD9 1512 aaPredicted RBP31.53■■■□□ 2.64
SIPA1L3-210ENST00000601054 EIF4G3O43432 1585 aaKnown RBP31.34■■■□□ 2.61
SIPA1L3-210ENST00000601054 POLA1P09884 1462 aaPredicted RBP31.33■■■□□ 2.61
SIPA1L3-210ENST00000601054 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
SIPA1L3-210ENST00000601054 AQRO60306 1485 aaKnown RBP eCLIP31.27■■■□□ 2.6
SIPA1L3-210ENST00000601054 SOGA1O94964 1423 aa31.22■■■□□ 2.59
SIPA1L3-210ENST00000601054 RAD54L2Q9Y4B4 1467 aa31.17■■■□□ 2.58
SIPA1L3-210ENST00000601054 RIMBP3CA6NJZ7 1639 aa31.14■■■□□ 2.58
SIPA1L3-210ENST00000601054 RIMBP3BA6NNM3 1639 aa31.14■■■□□ 2.58
SIPA1L3-210ENST00000601054 RIMBP3Q9UFD9 1639 aa31.14■■■□□ 2.58
SIPA1L3-210ENST00000601054 FGD5Q6ZNL6 1462 aa31.13■■■□□ 2.57
SIPA1L3-210ENST00000601054 WDR97A6NE52 1622 aa31.12■■■□□ 2.57
SIPA1L3-210ENST00000601054 ARHGEF11O15085 1522 aa31.11■■■□□ 2.57
SIPA1L3-210ENST00000601054 TDRD9Q8NDG6 1382 aaKnown RBP31.11■■■□□ 2.57
SIPA1L3-210ENST00000601054 CUX1P39880 1505 aa31.1■■■□□ 2.57
SIPA1L3-210ENST00000601054 SUPT5HO00267 1087 aaKnown RBP31.07■■■□□ 2.56
SIPA1L3-210ENST00000601054 FBLN2P98095 1184 aa31.06■■■□□ 2.56
SIPA1L3-210ENST00000601054 CHD1O14646 1710 aa31.02■■■□□ 2.56
SIPA1L3-210ENST00000601054 GRIN2BQ13224 1484 aa30.95■■■□□ 2.55
SIPA1L3-210ENST00000601054 SNAPC4Q5SXM2 1469 aa30.95■■■□□ 2.55
SIPA1L3-210ENST00000601054 MAGI1Q96QZ7 1491 aaPredicted RBP30.95■■■□□ 2.55
SIPA1L3-210ENST00000601054 CHMP7Q8WUX9 453 aaPredicted RBP30.91■■■□□ 2.54
SIPA1L3-210ENST00000601054 CYB5RLQ6IPT4 315 aa30.89■■■□□ 2.54
SIPA1L3-210ENST00000601054 ABCA10Q8WWZ4 1543 aa30.83■■■□□ 2.53
SIPA1L3-210ENST00000601054 SYNJ2O15056 1496 aa30.83■■■□□ 2.53
SIPA1L3-210ENST00000601054 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
SIPA1L3-210ENST00000601054 SYNJ1O43426 1573 aa30.79■■■□□ 2.52
SIPA1L3-210ENST00000601054 ARAP1Q96P48 1450 aa30.79■■■□□ 2.52
SIPA1L3-210ENST00000601054 CLASP1Q7Z460 1538 aa30.78■■■□□ 2.52
SIPA1L3-210ENST00000601054 WRNQ14191 1432 aaPredicted RBP eCLIP30.76■■■□□ 2.51
SIPA1L3-210ENST00000601054 ABCA5Q8WWZ7 1642 aa30.72■■■□□ 2.51
SIPA1L3-210ENST00000601054 PBRM1Q86U86 1689 aa30.68■■■□□ 2.5
SIPA1L3-210ENST00000601054 TOP2BQ02880 1626 aa30.65■■■□□ 2.5
SIPA1L3-210ENST00000601054 BIVM-ERCC5R4GMW8 1640 aa30.62■■■□□ 2.49
SIPA1L3-210ENST00000601054 GRIN2AQ12879 1464 aa30.53■■■□□ 2.48
SIPA1L3-210ENST00000601054 TRHP20396 242 aaPredicted RBP30.51■■■□□ 2.47
SIPA1L3-210ENST00000601054 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
SIPA1L3-210ENST00000601054 ADAMTS12P58397 1594 aa30.47■■■□□ 2.47
SIPA1L3-210ENST00000601054 ERICH3Q5RHP9 1530 aa30.46■■■□□ 2.47
SIPA1L3-210ENST00000601054 NUP160Q12769 1436 aa30.45■■■□□ 2.46
SIPA1L3-210ENST00000601054 CEP170Q5SW79 1584 aa30.35■■■□□ 2.45
SIPA1L3-210ENST00000601054 SHROOM2Q13796 1616 aa30.25■■■□□ 2.43
SIPA1L3-210ENST00000601054 ERCC6L2Q5T890 1561 aa30.23■■■□□ 2.43
SIPA1L3-210ENST00000601054 JPH4Q96JJ6 628 aa30.15■■■□□ 2.42
SIPA1L3-210ENST00000601054 KIF27Q86VH2 1401 aa30.13■■■□□ 2.41
SIPA1L3-210ENST00000601054 PRG4Q92954 1404 aaPredicted RBP30.13■■■□□ 2.41
SIPA1L3-210ENST00000601054 IGF1RP08069 1367 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms