RNA–Protein interactions for RNA: ENST00000600977.5

FKRP-224, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-224ENST00000600977 NISCHQ9Y2I1 1504 aa22.5■■□□□ 1.19
FKRP-224ENST00000600977 ABCC9O60706 1549 aa20.54■□□□□ 0.88
FKRP-224ENST00000600977 CCDC180Q9P1Z9 1646 aa20.33■□□□□ 0.84
FKRP-224ENST00000600977 DNAJC5BQ9UF47 199 aa19.55■□□□□ 0.72
FKRP-224ENST00000600977 RB1CC1Q8TDY2 1594 aa19.44■□□□□ 0.7
FKRP-224ENST00000600977 NACADO15069 1562 aa19.26■□□□□ 0.67
FKRP-224ENST00000600977 UNC13AQ9UPW8 1703 aa19.06■□□□□ 0.64
FKRP-224ENST00000600977 PABPN1Q86U42 306 aaKnown RBP eCLIP19.05■□□□□ 0.64
FKRP-224ENST00000600977 DCAF8L2P0C7V8 631 aa18.96■□□□□ 0.63
FKRP-224ENST00000600977 BICRAQ9NZM4 1560 aa18.95■□□□□ 0.62
FKRP-224ENST00000600977 MYO15BQ96JP2 1530 aa18.94■□□□□ 0.62
FKRP-224ENST00000600977 SHROOM4Q9ULL8 1493 aa18.65■□□□□ 0.58
FKRP-224ENST00000600977 ZCCHC6Q5VYS8 1495 aaKnown RBP18.61■□□□□ 0.57
FKRP-224ENST00000600977 DCAF1Q9Y4B6 1507 aa18.59■□□□□ 0.57
FKRP-224ENST00000600977 CC2D2AQ9P2K1 1620 aa18.58■□□□□ 0.56
FKRP-224ENST00000600977 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
FKRP-224ENST00000600977 EIF4G1Q04637 1599 aaKnown RBP18.47■□□□□ 0.55
FKRP-224ENST00000600977 SCRIBQ14160 1630 aa18.47■□□□□ 0.55
FKRP-224ENST00000600977 DNAJC5Q9H3Z4 198 aa18.12■□□□□ 0.49
FKRP-224ENST00000600977 CUX2O14529 1486 aa17.84■□□□□ 0.45
FKRP-224ENST00000600977 NCAPD3P42695 1498 aa17.79■□□□□ 0.44
FKRP-224ENST00000600977 ERCC6Q03468 1493 aa17.72■□□□□ 0.43
FKRP-224ENST00000600977 ATAD2BQ9ULI0 1458 aa17.69■□□□□ 0.42
FKRP-224ENST00000600977 HMGXB3Q12766 1538 aa17.64■□□□□ 0.41
FKRP-224ENST00000600977 SMARCA4P51532 1647 aa17.61■□□□□ 0.41
FKRP-224ENST00000600977 SMARCA2P51531 1590 aa17.61■□□□□ 0.41
FKRP-224ENST00000600977 NESP48681 1621 aa17.59■□□□□ 0.41
FKRP-224ENST00000600977 THOC2Q8NI27 1593 aaKnown RBP17.51■□□□□ 0.39
FKRP-224ENST00000600977 BAZ1BQ9UIG0 1483 aaKnown RBP17.47■□□□□ 0.39
FKRP-224ENST00000600977 PEG3Q9GZU2 1588 aa17.47■□□□□ 0.39
FKRP-224ENST00000600977 BAZ1AQ9NRL2 1556 aaPredicted RBP17.46■□□□□ 0.39
FKRP-224ENST00000600977 LAMC3Q9Y6N6 1575 aa17.43■□□□□ 0.38
FKRP-224ENST00000600977 KIF21AQ7Z4S6 1674 aa17.37■□□□□ 0.37
FKRP-224ENST00000600977 MROH2BQ7Z745 1585 aa17.34■□□□□ 0.37
FKRP-224ENST00000600977 PDS5BQ9NTI5 1447 aa17.3■□□□□ 0.36
FKRP-224ENST00000600977 CADPSQ9ULU8 1353 aa17.21■□□□□ 0.35
FKRP-224ENST00000600977 MRC2Q9UBG0 1479 aa17.19■□□□□ 0.34
FKRP-224ENST00000600977 WDR62O43379 1518 aa17.19■□□□□ 0.34
FKRP-224ENST00000600977 TRIM41Q8WV44 630 aa17.15■□□□□ 0.34
FKRP-224ENST00000600977 WIZO95785 1651 aa17.11■□□□□ 0.33
FKRP-224ENST00000600977 CEP164Q9UPV0 1460 aa17.05■□□□□ 0.32
FKRP-224ENST00000600977 FANCD2Q9BXW9 1451 aa17.02■□□□□ 0.32
FKRP-224ENST00000600977 CFTRP13569 1480 aa16.98■□□□□ 0.31
FKRP-224ENST00000600977 URB2Q14146 1524 aaKnown RBP16.92■□□□□ 0.3
FKRP-224ENST00000600977 OSCARQ8IYS5 282 aa16.91■□□□□ 0.3
FKRP-224ENST00000600977 TOP2AP11388 1531 aaKnown RBP16.88■□□□□ 0.29
FKRP-224ENST00000600977 RSF1Q96T23 1441 aaPredicted RBP16.87■□□□□ 0.29
FKRP-224ENST00000600977 PRDM2Q13029 1718 aa16.81■□□□□ 0.28
FKRP-224ENST00000600977 RIMBP3CA6NJZ7 1639 aa16.81■□□□□ 0.28
FKRP-224ENST00000600977 RIMBP3BA6NNM3 1639 aa16.81■□□□□ 0.28
FKRP-224ENST00000600977 RIMBP3Q9UFD9 1639 aa16.81■□□□□ 0.28
FKRP-224ENST00000600977 ZNF608Q9ULD9 1512 aaPredicted RBP16.75■□□□□ 0.27
FKRP-224ENST00000600977 IFT140Q96RY7 1462 aa16.73■□□□□ 0.27
FKRP-224ENST00000600977 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
FKRP-224ENST00000600977 TOPBP1Q92547 1522 aa16.68■□□□□ 0.26
FKRP-224ENST00000600977 CCDC88BA6NC98 1476 aa16.67■□□□□ 0.26
FKRP-224ENST00000600977 EIF4G3O43432 1585 aaKnown RBP16.65■□□□□ 0.26
FKRP-224ENST00000600977 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
FKRP-224ENST00000600977 DNMBPQ6XZF7 1577 aa16.6■□□□□ 0.25
FKRP-224ENST00000600977 TARBP1Q13395 1621 aaKnown RBP16.58■□□□□ 0.24
FKRP-224ENST00000600977 CHD1O14646 1710 aa16.58■□□□□ 0.24
FKRP-224ENST00000600977 ARAP1Q96P48 1450 aa16.54■□□□□ 0.24
FKRP-224ENST00000600977 AQRO60306 1485 aaKnown RBP eCLIP16.54■□□□□ 0.24
FKRP-224ENST00000600977 CYB5RLQ6IPT4 315 aa16.53■□□□□ 0.24
FKRP-224ENST00000600977 POLA1P09884 1462 aaPredicted RBP16.49■□□□□ 0.23
FKRP-224ENST00000600977 RAD54L2Q9Y4B4 1467 aa16.42■□□□□ 0.22
FKRP-224ENST00000600977 CLASP1Q7Z460 1538 aa16.41■□□□□ 0.22
FKRP-224ENST00000600977 TRHP20396 242 aaPredicted RBP16.4■□□□□ 0.22
FKRP-224ENST00000600977 FBLN2P98095 1184 aa16.4■□□□□ 0.22
FKRP-224ENST00000600977 WDR97A6NE52 1622 aa16.38■□□□□ 0.21
FKRP-224ENST00000600977 SNAPC4Q5SXM2 1469 aa16.38■□□□□ 0.21
FKRP-224ENST00000600977 TDRD9Q8NDG6 1382 aaKnown RBP16.38■□□□□ 0.21
FKRP-224ENST00000600977 SOGA1O94964 1423 aa16.37■□□□□ 0.21
FKRP-224ENST00000600977 FGD5Q6ZNL6 1462 aa16.35■□□□□ 0.21
FKRP-224ENST00000600977 SYNJ1O43426 1573 aa16.32■□□□□ 0.2
FKRP-224ENST00000600977 MAGI1Q96QZ7 1491 aaPredicted RBP16.32■□□□□ 0.2
FKRP-224ENST00000600977 CUX1P39880 1505 aa16.3■□□□□ 0.2
FKRP-224ENST00000600977 GRIN2BQ13224 1484 aa16.28■□□□□ 0.2
FKRP-224ENST00000600977 SYNJ2O15056 1496 aa16.27■□□□□ 0.19
FKRP-224ENST00000600977 CHMP7Q8WUX9 453 aaPredicted RBP16.26■□□□□ 0.19
FKRP-224ENST00000600977 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
FKRP-224ENST00000600977 GAPVD1Q14C86 1478 aa16.2■□□□□ 0.18
FKRP-224ENST00000600977 ABCA5Q8WWZ7 1642 aa16.18■□□□□ 0.18
FKRP-224ENST00000600977 ABCA10Q8WWZ4 1543 aa16.15■□□□□ 0.18
FKRP-224ENST00000600977 ERCC6L2Q5T890 1561 aa16.13■□□□□ 0.17
FKRP-224ENST00000600977 AEBP2Q6ZN18 517 aaPredicted RBP16.1■□□□□ 0.17
FKRP-224ENST00000600977 GRIN2AQ12879 1464 aa16.09■□□□□ 0.17
FKRP-224ENST00000600977 ADAMTS12P58397 1594 aa16.07■□□□□ 0.16
FKRP-224ENST00000600977 CEP170Q5SW79 1584 aa16.07■□□□□ 0.16
FKRP-224ENST00000600977 NUP160Q12769 1436 aa16.06■□□□□ 0.16
FKRP-224ENST00000600977 SHROOM2Q13796 1616 aa16.05■□□□□ 0.16
FKRP-224ENST00000600977 BIVM-ERCC5R4GMW8 1640 aa15.98■□□□□ 0.15
FKRP-224ENST00000600977 WRNQ14191 1432 aaPredicted RBP eCLIP15.98■□□□□ 0.15
FKRP-224ENST00000600977 FHAD1B1AJZ9 1412 aa15.97■□□□□ 0.15
FKRP-224ENST00000600977 KIF13AQ9H1H9 1805 aa15.97■□□□□ 0.15
FKRP-224ENST00000600977 TOP2BQ02880 1626 aa15.96■□□□□ 0.15
FKRP-224ENST00000600977 ERICH3Q5RHP9 1530 aa15.94■□□□□ 0.14
FKRP-224ENST00000600977 PRG4Q92954 1404 aaPredicted RBP15.88■□□□□ 0.13
FKRP-224ENST00000600977 RUSC2Q8N2Y8 1516 aa15.85■□□□□ 0.13
FKRP-224ENST00000600977 JPH4Q96JJ6 628 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms