RNA–Protein interactions for RNA: ENST00000600964.1

AP2S1-208, Transcript of adaptor related protein complex 2 subunit sigma 1, humanhuman

TSL 1 (best)

Gene AP2S1, Length 458 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP2S1-208ENST00000600964 NISCHQ9Y2I1 1504 aa46.02■■■■■ 4.96
AP2S1-208ENST00000600964 CCDC180Q9P1Z9 1646 aa41.3■■■■■ 4.2
AP2S1-208ENST00000600964 ABCC9O60706 1549 aa41.13■■■■■ 4.18
AP2S1-208ENST00000600964 RB1CC1Q8TDY2 1594 aa39.22■■■■□ 3.87
AP2S1-208ENST00000600964 NACADO15069 1562 aa39■■■■□ 3.83
AP2S1-208ENST00000600964 DNAJC5BQ9UF47 199 aa38.67■■■■□ 3.78
AP2S1-208ENST00000600964 DCAF8L2P0C7V8 631 aa38.63■■■■□ 3.77
AP2S1-208ENST00000600964 MYO15BQ96JP2 1530 aa38.54■■■■□ 3.76
AP2S1-208ENST00000600964 UNC13AQ9UPW8 1703 aa38.52■■■■□ 3.76
AP2S1-208ENST00000600964 PABPN1Q86U42 306 aaKnown RBP eCLIP38.29■■■■□ 3.72
AP2S1-208ENST00000600964 BICRAQ9NZM4 1560 aa38.19■■■■□ 3.7
AP2S1-208ENST00000600964 ZCCHC6Q5VYS8 1495 aaKnown RBP38.13■■■■□ 3.69
AP2S1-208ENST00000600964 DCAF1Q9Y4B6 1507 aa38.06■■■■□ 3.68
AP2S1-208ENST00000600964 SHROOM4Q9ULL8 1493 aa37.59■■■■□ 3.61
AP2S1-208ENST00000600964 SCRIBQ14160 1630 aa37.54■■■■□ 3.6
AP2S1-208ENST00000600964 CC2D2AQ9P2K1 1620 aa37.24■■■■□ 3.55
AP2S1-208ENST00000600964 EIF4G1Q04637 1599 aaKnown RBP37.16■■■■□ 3.54
AP2S1-208ENST00000600964 CECR2Q9BXF3 1484 aa37.06■■■■□ 3.52
AP2S1-208ENST00000600964 NCAPD3P42695 1498 aa36.02■■■■□ 3.36
AP2S1-208ENST00000600964 ATAD2BQ9ULI0 1458 aa35.89■■■■□ 3.34
AP2S1-208ENST00000600964 SMARCA4P51532 1647 aa35.88■■■■□ 3.33
AP2S1-208ENST00000600964 SMARCA2P51531 1590 aa35.77■■■■□ 3.32
AP2S1-208ENST00000600964 HMGXB3Q12766 1538 aa35.74■■■■□ 3.31
AP2S1-208ENST00000600964 BAZ1AQ9NRL2 1556 aaPredicted RBP35.68■■■■□ 3.3
AP2S1-208ENST00000600964 PEG3Q9GZU2 1588 aa35.59■■■■□ 3.29
AP2S1-208ENST00000600964 BAZ1BQ9UIG0 1483 aaKnown RBP35.48■■■■□ 3.27
AP2S1-208ENST00000600964 CUX2O14529 1486 aa35.47■■■■□ 3.27
AP2S1-208ENST00000600964 MROH2BQ7Z745 1585 aa35.46■■■■□ 3.27
AP2S1-208ENST00000600964 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
AP2S1-208ENST00000600964 DNAJC5Q9H3Z4 198 aa35.43■■■■□ 3.26
AP2S1-208ENST00000600964 NESP48681 1621 aa35.4■■■■□ 3.26
AP2S1-208ENST00000600964 LAMC3Q9Y6N6 1575 aa35.18■■■■□ 3.22
AP2S1-208ENST00000600964 THOC2Q8NI27 1593 aaKnown RBP35.07■■■■□ 3.2
AP2S1-208ENST00000600964 WIZO95785 1651 aa35.05■■■■□ 3.2
AP2S1-208ENST00000600964 KIF21AQ7Z4S6 1674 aa35■■■■□ 3.19
AP2S1-208ENST00000600964 PDS5BQ9NTI5 1447 aa34.91■■■■□ 3.18
AP2S1-208ENST00000600964 CADPSQ9ULU8 1353 aa34.88■■■■□ 3.17
AP2S1-208ENST00000600964 RSF1Q96T23 1441 aaPredicted RBP34.72■■■■□ 3.15
AP2S1-208ENST00000600964 MRC2Q9UBG0 1479 aa34.61■■■■□ 3.13
AP2S1-208ENST00000600964 WDR62O43379 1518 aa34.58■■■■□ 3.13
AP2S1-208ENST00000600964 TOP2AP11388 1531 aaKnown RBP34.55■■■■□ 3.12
AP2S1-208ENST00000600964 CFTRP13569 1480 aa34.52■■■■□ 3.12
AP2S1-208ENST00000600964 FANCD2Q9BXW9 1451 aa34.46■■■■□ 3.11
AP2S1-208ENST00000600964 CEP164Q9UPV0 1460 aa34.46■■■■□ 3.11
AP2S1-208ENST00000600964 PRDM2Q13029 1718 aa34.28■■■■□ 3.08
AP2S1-208ENST00000600964 URB2Q14146 1524 aaKnown RBP34.22■■■■□ 3.07
AP2S1-208ENST00000600964 CCDC88BA6NC98 1476 aa34.19■■■■□ 3.06
AP2S1-208ENST00000600964 TOPBP1Q92547 1522 aa33.85■■■■□ 3.01
AP2S1-208ENST00000600964 OSCARQ8IYS5 282 aa33.84■■■■□ 3.01
AP2S1-208ENST00000600964 IFT140Q96RY7 1462 aa33.8■■■■□ 3
AP2S1-208ENST00000600964 ZNF608Q9ULD9 1512 aaPredicted RBP33.78■■■■□ 3
AP2S1-208ENST00000600964 ABCC8Q09428 1581 aa33.77■■■■□ 3
AP2S1-208ENST00000600964 TRIM41Q8WV44 630 aa33.73■■■□□ 2.99
AP2S1-208ENST00000600964 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
AP2S1-208ENST00000600964 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
AP2S1-208ENST00000600964 EIF4G3O43432 1585 aaKnown RBP33.58■■■□□ 2.97
AP2S1-208ENST00000600964 POLA1P09884 1462 aaPredicted RBP33.5■■■□□ 2.95
AP2S1-208ENST00000600964 AQRO60306 1485 aaKnown RBP eCLIP33.46■■■□□ 2.95
AP2S1-208ENST00000600964 RIMBP3CA6NJZ7 1639 aa33.45■■■□□ 2.95
AP2S1-208ENST00000600964 RIMBP3BA6NNM3 1639 aa33.45■■■□□ 2.95
AP2S1-208ENST00000600964 RIMBP3Q9UFD9 1639 aa33.45■■■□□ 2.95
AP2S1-208ENST00000600964 CHD1O14646 1710 aa33.39■■■□□ 2.94
AP2S1-208ENST00000600964 RAD54L2Q9Y4B4 1467 aa33.36■■■□□ 2.93
AP2S1-208ENST00000600964 SOGA1O94964 1423 aa33.33■■■□□ 2.93
AP2S1-208ENST00000600964 ARHGEF11O15085 1522 aa33.31■■■□□ 2.92
AP2S1-208ENST00000600964 CUX1P39880 1505 aa33.3■■■□□ 2.92
AP2S1-208ENST00000600964 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
AP2S1-208ENST00000600964 TDRD9Q8NDG6 1382 aaKnown RBP33.24■■■□□ 2.91
AP2S1-208ENST00000600964 WDR97A6NE52 1622 aa33.24■■■□□ 2.91
AP2S1-208ENST00000600964 FBLN2P98095 1184 aa33.11■■■□□ 2.89
AP2S1-208ENST00000600964 SNAPC4Q5SXM2 1469 aa33.09■■■□□ 2.89
AP2S1-208ENST00000600964 SUPT5HO00267 1087 aaKnown RBP33.08■■■□□ 2.89
AP2S1-208ENST00000600964 MAGI1Q96QZ7 1491 aaPredicted RBP33.04■■■□□ 2.88
AP2S1-208ENST00000600964 GRIN2BQ13224 1484 aa33.03■■■□□ 2.88
AP2S1-208ENST00000600964 CYB5RLQ6IPT4 315 aa33.01■■■□□ 2.87
AP2S1-208ENST00000600964 ARAP1Q96P48 1450 aa33■■■□□ 2.87
AP2S1-208ENST00000600964 CLASP1Q7Z460 1538 aa32.98■■■□□ 2.87
AP2S1-208ENST00000600964 PBRM1Q86U86 1689 aa32.97■■■□□ 2.87
AP2S1-208ENST00000600964 ABCA10Q8WWZ4 1543 aa32.94■■■□□ 2.86
AP2S1-208ENST00000600964 GAPVD1Q14C86 1478 aa32.93■■■□□ 2.86
AP2S1-208ENST00000600964 CHMP7Q8WUX9 453 aaPredicted RBP32.92■■■□□ 2.86
AP2S1-208ENST00000600964 SYNJ2O15056 1496 aa32.92■■■□□ 2.86
AP2S1-208ENST00000600964 ABCA5Q8WWZ7 1642 aa32.91■■■□□ 2.86
AP2S1-208ENST00000600964 SYNJ1O43426 1573 aa32.9■■■□□ 2.86
AP2S1-208ENST00000600964 BIVM-ERCC5R4GMW8 1640 aa32.82■■■□□ 2.84
AP2S1-208ENST00000600964 TOP2BQ02880 1626 aa32.79■■■□□ 2.84
AP2S1-208ENST00000600964 WRNQ14191 1432 aaPredicted RBP eCLIP32.76■■■□□ 2.83
AP2S1-208ENST00000600964 ADAMTS12P58397 1594 aa32.61■■■□□ 2.81
AP2S1-208ENST00000600964 GRIN2AQ12879 1464 aa32.61■■■□□ 2.81
AP2S1-208ENST00000600964 TRHP20396 242 aaPredicted RBP32.55■■■□□ 2.8
AP2S1-208ENST00000600964 NUP160Q12769 1436 aa32.53■■■□□ 2.8
AP2S1-208ENST00000600964 CEP170Q5SW79 1584 aa32.53■■■□□ 2.8
AP2S1-208ENST00000600964 ERICH3Q5RHP9 1530 aa32.52■■■□□ 2.8
AP2S1-208ENST00000600964 FHAD1B1AJZ9 1412 aa32.51■■■□□ 2.79
AP2S1-208ENST00000600964 ERCC6L2Q5T890 1561 aa32.48■■■□□ 2.79
AP2S1-208ENST00000600964 SHROOM2Q13796 1616 aa32.44■■■□□ 2.78
AP2S1-208ENST00000600964 JPH4Q96JJ6 628 aa32.18■■■□□ 2.74
AP2S1-208ENST00000600964 PRG4Q92954 1404 aaPredicted RBP32.16■■■□□ 2.74
AP2S1-208ENST00000600964 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
AP2S1-208ENST00000600964 IGF1RP08069 1367 aa32.14■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms