RNA–Protein interactions for RNA: ENST00000600909.1

KCNN4-207, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 3

Gene KCNN4, Length 1,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-207ENST00000600909 NISCHQ9Y2I1 1504 aa46.33■■■■■ 5.01
KCNN4-207ENST00000600909 CCDC180Q9P1Z9 1646 aa41.15■■■■■ 4.18
KCNN4-207ENST00000600909 ABCC9O60706 1549 aa40.4■■■■■ 4.06
KCNN4-207ENST00000600909 DCAF8L2P0C7V8 631 aa38.93■■■■□ 3.82
KCNN4-207ENST00000600909 RB1CC1Q8TDY2 1594 aa38.78■■■■□ 3.8
KCNN4-207ENST00000600909 NACADO15069 1562 aa38.7■■■■□ 3.79
KCNN4-207ENST00000600909 ZCCHC6Q5VYS8 1495 aaKnown RBP38.59■■■■□ 3.77
KCNN4-207ENST00000600909 MYO15BQ96JP2 1530 aa38.38■■■■□ 3.74
KCNN4-207ENST00000600909 DCAF1Q9Y4B6 1507 aa38.25■■■■□ 3.71
KCNN4-207ENST00000600909 UNC13AQ9UPW8 1703 aa37.9■■■■□ 3.66
KCNN4-207ENST00000600909 PABPN1Q86U42 306 aaKnown RBP eCLIP37.78■■■■□ 3.64
KCNN4-207ENST00000600909 SCRIBQ14160 1630 aa37.68■■■■□ 3.62
KCNN4-207ENST00000600909 BICRAQ9NZM4 1560 aa37.57■■■■□ 3.6
KCNN4-207ENST00000600909 SHROOM4Q9ULL8 1493 aa37.1■■■■□ 3.53
KCNN4-207ENST00000600909 DNAJC5BQ9UF47 199 aa37.02■■■■□ 3.52
KCNN4-207ENST00000600909 EIF4G1Q04637 1599 aaKnown RBP36.61■■■■□ 3.45
KCNN4-207ENST00000600909 CC2D2AQ9P2K1 1620 aa36.48■■■■□ 3.43
KCNN4-207ENST00000600909 CECR2Q9BXF3 1484 aa36.25■■■■□ 3.39
KCNN4-207ENST00000600909 SMARCA4P51532 1647 aa35.97■■■■□ 3.35
KCNN4-207ENST00000600909 BAZ1AQ9NRL2 1556 aaPredicted RBP35.92■■■■□ 3.34
KCNN4-207ENST00000600909 ATAD2BQ9ULI0 1458 aa35.76■■■■□ 3.32
KCNN4-207ENST00000600909 MROH2BQ7Z745 1585 aa35.74■■■■□ 3.31
KCNN4-207ENST00000600909 SMARCA2P51531 1590 aa35.71■■■■□ 3.31
KCNN4-207ENST00000600909 NCAPD3P42695 1498 aa35.69■■■■□ 3.3
KCNN4-207ENST00000600909 PEG3Q9GZU2 1588 aa35.53■■■■□ 3.28
KCNN4-207ENST00000600909 HMGXB3Q12766 1538 aa35.52■■■■□ 3.28
KCNN4-207ENST00000600909 BAZ1BQ9UIG0 1483 aaKnown RBP35.51■■■■□ 3.28
KCNN4-207ENST00000600909 WIZO95785 1651 aa35.38■■■■□ 3.25
KCNN4-207ENST00000600909 RSF1Q96T23 1441 aaPredicted RBP35.32■■■■□ 3.24
KCNN4-207ENST00000600909 TOP2AP11388 1531 aaKnown RBP34.96■■■■□ 3.19
KCNN4-207ENST00000600909 NESP48681 1621 aa34.93■■■■□ 3.18
KCNN4-207ENST00000600909 ERCC6Q03468 1493 aa34.83■■■■□ 3.17
KCNN4-207ENST00000600909 LAMC3Q9Y6N6 1575 aa34.79■■■■□ 3.16
KCNN4-207ENST00000600909 CADPSQ9ULU8 1353 aa34.7■■■■□ 3.15
KCNN4-207ENST00000600909 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
KCNN4-207ENST00000600909 PDS5BQ9NTI5 1447 aa34.58■■■■□ 3.13
KCNN4-207ENST00000600909 CCDC88BA6NC98 1476 aa34.58■■■■□ 3.13
KCNN4-207ENST00000600909 KIF21AQ7Z4S6 1674 aa34.51■■■■□ 3.12
KCNN4-207ENST00000600909 CFTRP13569 1480 aa34.46■■■■□ 3.11
KCNN4-207ENST00000600909 THOC2Q8NI27 1593 aaKnown RBP34.35■■■■□ 3.09
KCNN4-207ENST00000600909 CUX2O14529 1486 aa34.34■■■■□ 3.09
KCNN4-207ENST00000600909 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
KCNN4-207ENST00000600909 CEP164Q9UPV0 1460 aa34.3■■■■□ 3.08
KCNN4-207ENST00000600909 MRC2Q9UBG0 1479 aa34.22■■■■□ 3.07
KCNN4-207ENST00000600909 PRDM2Q13029 1718 aa34.22■■■■□ 3.07
KCNN4-207ENST00000600909 WDR62O43379 1518 aa34.08■■■■□ 3.05
KCNN4-207ENST00000600909 URB2Q14146 1524 aaKnown RBP33.98■■■■□ 3.03
KCNN4-207ENST00000600909 TOPBP1Q92547 1522 aa33.78■■■■□ 3
KCNN4-207ENST00000600909 ABCC8Q09428 1581 aa33.73■■■□□ 2.99
KCNN4-207ENST00000600909 DNMBPQ6XZF7 1577 aa33.72■■■□□ 2.99
KCNN4-207ENST00000600909 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
KCNN4-207ENST00000600909 CUX1P39880 1505 aa33.53■■■□□ 2.96
KCNN4-207ENST00000600909 POLA1P09884 1462 aaPredicted RBP33.48■■■□□ 2.95
KCNN4-207ENST00000600909 FGD5Q6ZNL6 1462 aa33.44■■■□□ 2.94
KCNN4-207ENST00000600909 ZNF608Q9ULD9 1512 aaPredicted RBP33.43■■■□□ 2.94
KCNN4-207ENST00000600909 RAD54L2Q9Y4B4 1467 aa33.39■■■□□ 2.94
KCNN4-207ENST00000600909 SOGA1O94964 1423 aa33.37■■■□□ 2.93
KCNN4-207ENST00000600909 TARBP1Q13395 1621 aaKnown RBP33.37■■■□□ 2.93
KCNN4-207ENST00000600909 WRNQ14191 1432 aaPredicted RBP eCLIP33.33■■■□□ 2.93
KCNN4-207ENST00000600909 DNAJC5Q9H3Z4 198 aa33.31■■■□□ 2.92
KCNN4-207ENST00000600909 EIF4G3O43432 1585 aaKnown RBP33.3■■■□□ 2.92
KCNN4-207ENST00000600909 AQRO60306 1485 aaKnown RBP eCLIP33.26■■■□□ 2.924e-7■■■■□ 20
KCNN4-207ENST00000600909 SYNJ1O43426 1573 aa33.25■■■□□ 2.91
KCNN4-207ENST00000600909 TDRD9Q8NDG6 1382 aaKnown RBP33.21■■■□□ 2.91
KCNN4-207ENST00000600909 TOP2BQ02880 1626 aa33.21■■■□□ 2.91
KCNN4-207ENST00000600909 BIVM-ERCC5R4GMW8 1640 aa33.21■■■□□ 2.91
KCNN4-207ENST00000600909 WDR97A6NE52 1622 aa33.1■■■□□ 2.89
KCNN4-207ENST00000600909 ABCA10Q8WWZ4 1543 aa33.06■■■□□ 2.88
KCNN4-207ENST00000600909 OSCARQ8IYS5 282 aa33■■■□□ 2.87
KCNN4-207ENST00000600909 GAPVD1Q14C86 1478 aa32.98■■■□□ 2.87
KCNN4-207ENST00000600909 FBLN2P98095 1184 aa32.96■■■□□ 2.87
KCNN4-207ENST00000600909 GRIN2BQ13224 1484 aa32.96■■■□□ 2.87
KCNN4-207ENST00000600909 SNAPC4Q5SXM2 1469 aa32.95■■■□□ 2.87
KCNN4-207ENST00000600909 ABCA5Q8WWZ7 1642 aa32.93■■■□□ 2.86
KCNN4-207ENST00000600909 PBRM1Q86U86 1689 aa32.92■■■□□ 2.86
KCNN4-207ENST00000600909 CHD1O14646 1710 aa32.88■■■□□ 2.85
KCNN4-207ENST00000600909 MAGI1Q96QZ7 1491 aaPredicted RBP32.85■■■□□ 2.85
KCNN4-207ENST00000600909 CHMP7Q8WUX9 453 aaPredicted RBP32.81■■■□□ 2.84
KCNN4-207ENST00000600909 SYNJ2O15056 1496 aa32.74■■■□□ 2.83
KCNN4-207ENST00000600909 ERICH3Q5RHP9 1530 aa32.66■■■□□ 2.82
KCNN4-207ENST00000600909 ADAMTS12P58397 1594 aa32.64■■■□□ 2.82
KCNN4-207ENST00000600909 KIF27Q86VH2 1401 aa32.63■■■□□ 2.81
KCNN4-207ENST00000600909 TRIM41Q8WV44 630 aa32.63■■■□□ 2.81
KCNN4-207ENST00000600909 FHAD1B1AJZ9 1412 aa32.58■■■□□ 2.81
KCNN4-207ENST00000600909 GRIN2AQ12879 1464 aa32.54■■■□□ 2.8
KCNN4-207ENST00000600909 CLASP1Q7Z460 1538 aa32.47■■■□□ 2.79
KCNN4-207ENST00000600909 IGF1RP08069 1367 aa32.46■■■□□ 2.79
KCNN4-207ENST00000600909 RIMBP3CA6NJZ7 1639 aa32.46■■■□□ 2.79
KCNN4-207ENST00000600909 RIMBP3BA6NNM3 1639 aa32.46■■■□□ 2.79
KCNN4-207ENST00000600909 RIMBP3Q9UFD9 1639 aa32.46■■■□□ 2.79
KCNN4-207ENST00000600909 ARHGEF11O15085 1522 aa32.44■■■□□ 2.78
KCNN4-207ENST00000600909 CUL7Q14999 1698 aa32.39■■■□□ 2.78
KCNN4-207ENST00000600909 CEP170Q5SW79 1584 aa32.38■■■□□ 2.77
KCNN4-207ENST00000600909 RUSC2Q8N2Y8 1516 aa32.37■■■□□ 2.77
KCNN4-207ENST00000600909 NUP160Q12769 1436 aa32.35■■■□□ 2.77
KCNN4-207ENST00000600909 CARMIL1Q5VZK9 1371 aa32.32■■■□□ 2.76
KCNN4-207ENST00000600909 CYB5RLQ6IPT4 315 aa32.22■■■□□ 2.75
KCNN4-207ENST00000600909 CHIC1Q5VXU3 224 aa32.19■■■□□ 2.74
KCNN4-207ENST00000600909 ARAP1Q96P48 1450 aa32.17■■■□□ 2.74
KCNN4-207ENST00000600909 RAPGEF2Q9Y4G8 1499 aa32.12■■■□□ 2.73
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms