RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-223ENST00000600872 NISCHQ9Y2I1 1504 aa31.88■■■□□ 2.69
FKRP-223ENST00000600872 CCDC180Q9P1Z9 1646 aa28.47■■■□□ 2.15
FKRP-223ENST00000600872 ABCC9O60706 1549 aa28.13■■■□□ 2.09
FKRP-223ENST00000600872 RB1CC1Q8TDY2 1594 aa26.91■■□□□ 1.9
FKRP-223ENST00000600872 NACADO15069 1562 aa26.83■■□□□ 1.89
FKRP-223ENST00000600872 MYO15BQ96JP2 1530 aa26.6■■□□□ 1.85
FKRP-223ENST00000600872 DCAF8L2P0C7V8 631 aa26.59■■□□□ 1.85
FKRP-223ENST00000600872 ZCCHC6Q5VYS8 1495 aaKnown RBP26.5■■□□□ 1.83
FKRP-223ENST00000600872 UNC13AQ9UPW8 1703 aa26.43■■□□□ 1.82
FKRP-223ENST00000600872 DCAF1Q9Y4B6 1507 aa26.37■■□□□ 1.81
FKRP-223ENST00000600872 BICRAQ9NZM4 1560 aa26.24■■□□□ 1.79
FKRP-223ENST00000600872 PABPN1Q86U42 306 aaKnown RBP eCLIP26.23■■□□□ 1.79
FKRP-223ENST00000600872 DNAJC5BQ9UF47 199 aa26.23■■□□□ 1.79
FKRP-223ENST00000600872 SCRIBQ14160 1630 aa25.92■■□□□ 1.74
FKRP-223ENST00000600872 SHROOM4Q9ULL8 1493 aa25.82■■□□□ 1.72
FKRP-223ENST00000600872 EIF4G1Q04637 1599 aaKnown RBP25.49■■□□□ 1.67
FKRP-223ENST00000600872 CC2D2AQ9P2K1 1620 aa25.47■■□□□ 1.67
FKRP-223ENST00000600872 CECR2Q9BXF3 1484 aa25.31■■□□□ 1.64
FKRP-223ENST00000600872 SMARCA4P51532 1647 aa24.8■■□□□ 1.56
FKRP-223ENST00000600872 NCAPD3P42695 1498 aa24.79■■□□□ 1.56
FKRP-223ENST00000600872 ATAD2BQ9ULI0 1458 aa24.76■■□□□ 1.55
FKRP-223ENST00000600872 BAZ1AQ9NRL2 1556 aaPredicted RBP24.68■■□□□ 1.54
FKRP-223ENST00000600872 SMARCA2P51531 1590 aa24.65■■□□□ 1.54
FKRP-223ENST00000600872 HMGXB3Q12766 1538 aa24.62■■□□□ 1.53
FKRP-223ENST00000600872 PEG3Q9GZU2 1588 aa24.61■■□□□ 1.53
FKRP-223ENST00000600872 MROH2BQ7Z745 1585 aa24.58■■□□□ 1.52
FKRP-223ENST00000600872 BAZ1BQ9UIG0 1483 aaKnown RBP24.46■■□□□ 1.51
FKRP-223ENST00000600872 NESP48681 1621 aa24.31■■□□□ 1.48
FKRP-223ENST00000600872 WIZO95785 1651 aa24.3■■□□□ 1.48
FKRP-223ENST00000600872 ERCC6Q03468 1493 aa24.19■■□□□ 1.46
FKRP-223ENST00000600872 RSF1Q96T23 1441 aaPredicted RBP24.17■■□□□ 1.46
FKRP-223ENST00000600872 LAMC3Q9Y6N6 1575 aa24.16■■□□□ 1.46
FKRP-223ENST00000600872 CUX2O14529 1486 aa24.13■■□□□ 1.45
FKRP-223ENST00000600872 THOC2Q8NI27 1593 aaKnown RBP24.02■■□□□ 1.44
FKRP-223ENST00000600872 CADPSQ9ULU8 1353 aa24.02■■□□□ 1.44
FKRP-223ENST00000600872 KIF21AQ7Z4S6 1674 aa24.01■■□□□ 1.43
FKRP-223ENST00000600872 TOP2AP11388 1531 aaKnown RBP23.99■■□□□ 1.43
FKRP-223ENST00000600872 PDS5BQ9NTI5 1447 aa23.95■■□□□ 1.42
FKRP-223ENST00000600872 CFTRP13569 1480 aa23.84■■□□□ 1.41
FKRP-223ENST00000600872 DNAJC5Q9H3Z4 198 aa23.79■■□□□ 1.4
FKRP-223ENST00000600872 MRC2Q9UBG0 1479 aa23.76■■□□□ 1.39
FKRP-223ENST00000600872 FANCD2Q9BXW9 1451 aa23.74■■□□□ 1.39
FKRP-223ENST00000600872 WDR62O43379 1518 aa23.74■■□□□ 1.39
FKRP-223ENST00000600872 CCDC88BA6NC98 1476 aa23.72■■□□□ 1.39
FKRP-223ENST00000600872 CEP164Q9UPV0 1460 aa23.7■■□□□ 1.38
FKRP-223ENST00000600872 PRDM2Q13029 1718 aa23.64■■□□□ 1.37
FKRP-223ENST00000600872 URB2Q14146 1524 aaKnown RBP23.57■■□□□ 1.36
FKRP-223ENST00000600872 TOPBP1Q92547 1522 aa23.34■■□□□ 1.33
FKRP-223ENST00000600872 DNMBPQ6XZF7 1577 aa23.27■■□□□ 1.32
FKRP-223ENST00000600872 ABCC8Q09428 1581 aa23.26■■□□□ 1.31
FKRP-223ENST00000600872 IFT140Q96RY7 1462 aa23.23■■□□□ 1.31
FKRP-223ENST00000600872 ZNF608Q9ULD9 1512 aaPredicted RBP23.22■■□□□ 1.31
FKRP-223ENST00000600872 SUPT5HO00267 1087 aaKnown RBP23.18■■□□□ 1.3
FKRP-223ENST00000600872 TARBP1Q13395 1621 aaKnown RBP23.16■■□□□ 1.3
FKRP-223ENST00000600872 POLA1P09884 1462 aaPredicted RBP23.12■■□□□ 1.29
FKRP-223ENST00000600872 EIF4G3O43432 1585 aaKnown RBP23.09■■□□□ 1.29
FKRP-223ENST00000600872 CUX1P39880 1505 aa23.08■■□□□ 1.28
FKRP-223ENST00000600872 OSCARQ8IYS5 282 aa23.03■■□□□ 1.28
FKRP-223ENST00000600872 RAD54L2Q9Y4B4 1467 aa23.03■■□□□ 1.28
FKRP-223ENST00000600872 AQRO60306 1485 aaKnown RBP eCLIP23.02■■□□□ 1.28
FKRP-223ENST00000600872 FGD5Q6ZNL6 1462 aa23■■□□□ 1.27
FKRP-223ENST00000600872 SOGA1O94964 1423 aa22.99■■□□□ 1.27
FKRP-223ENST00000600872 TDRD9Q8NDG6 1382 aaKnown RBP22.9■■□□□ 1.26
FKRP-223ENST00000600872 WDR97A6NE52 1622 aa22.9■■□□□ 1.26
FKRP-223ENST00000600872 CHD1O14646 1710 aa22.88■■□□□ 1.25
FKRP-223ENST00000600872 BIVM-ERCC5R4GMW8 1640 aa22.79■■□□□ 1.24
FKRP-223ENST00000600872 ABCA10Q8WWZ4 1543 aa22.78■■□□□ 1.24
FKRP-223ENST00000600872 RIMBP3CA6NJZ7 1639 aa22.78■■□□□ 1.24
FKRP-223ENST00000600872 RIMBP3BA6NNM3 1639 aa22.78■■□□□ 1.24
FKRP-223ENST00000600872 RIMBP3Q9UFD9 1639 aa22.78■■□□□ 1.24
FKRP-223ENST00000600872 SNAPC4Q5SXM2 1469 aa22.78■■□□□ 1.24
FKRP-223ENST00000600872 TRIM41Q8WV44 630 aa22.77■■□□□ 1.24
FKRP-223ENST00000600872 TOP2BQ02880 1626 aa22.77■■□□□ 1.24
FKRP-223ENST00000600872 SYNJ1O43426 1573 aa22.76■■□□□ 1.23
FKRP-223ENST00000600872 GRIN2BQ13224 1484 aa22.75■■□□□ 1.23
FKRP-223ENST00000600872 ABCA5Q8WWZ7 1642 aa22.75■■□□□ 1.23
FKRP-223ENST00000600872 WRNQ14191 1432 aaPredicted RBP eCLIP22.74■■□□□ 1.23
FKRP-223ENST00000600872 MAGI1Q96QZ7 1491 aaPredicted RBP22.73■■□□□ 1.23
FKRP-223ENST00000600872 ARHGEF11O15085 1522 aa22.72■■□□□ 1.23
FKRP-223ENST00000600872 PBRM1Q86U86 1689 aa22.72■■□□□ 1.23
FKRP-223ENST00000600872 GAPVD1Q14C86 1478 aa22.72■■□□□ 1.23
FKRP-223ENST00000600872 FBLN2P98095 1184 aa22.68■■□□□ 1.22
FKRP-223ENST00000600872 CLASP1Q7Z460 1538 aa22.65■■□□□ 1.22
FKRP-223ENST00000600872 SYNJ2O15056 1496 aa22.65■■□□□ 1.22
FKRP-223ENST00000600872 CHMP7Q8WUX9 453 aaPredicted RBP22.59■■□□□ 1.21
FKRP-223ENST00000600872 ARAP1Q96P48 1450 aa22.54■■□□□ 1.2
FKRP-223ENST00000600872 ADAMTS12P58397 1594 aa22.52■■□□□ 1.2
FKRP-223ENST00000600872 GRIN2AQ12879 1464 aa22.48■■□□□ 1.19
FKRP-223ENST00000600872 ERICH3Q5RHP9 1530 aa22.48■■□□□ 1.19
FKRP-223ENST00000600872 CYB5RLQ6IPT4 315 aa22.47■■□□□ 1.19
FKRP-223ENST00000600872 FHAD1B1AJZ9 1412 aa22.44■■□□□ 1.18
FKRP-223ENST00000600872 NUP160Q12769 1436 aa22.43■■□□□ 1.18
FKRP-223ENST00000600872 CEP170Q5SW79 1584 aa22.42■■□□□ 1.18
FKRP-223ENST00000600872 ERCC6L2Q5T890 1561 aa22.33■■□□□ 1.16
FKRP-223ENST00000600872 SHROOM2Q13796 1616 aa22.32■■□□□ 1.16
FKRP-223ENST00000600872 IGF1RP08069 1367 aa22.28■■□□□ 1.16
FKRP-223ENST00000600872 KIF27Q86VH2 1401 aa22.26■■□□□ 1.15
FKRP-223ENST00000600872 RUSC2Q8N2Y8 1516 aa22.21■■□□□ 1.15
FKRP-223ENST00000600872 CUL7Q14999 1698 aa22.2■■□□□ 1.14
FKRP-223ENST00000600872 JPH4Q96JJ6 628 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms