RNA–Protein interactions for RNA: ENST00000600834.5

FKRP-222, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-222ENST00000600834 NISCHQ9Y2I1 1504 aa47.25■■■■■ 5.16
FKRP-222ENST00000600834 CCDC180Q9P1Z9 1646 aa41.91■■■■■ 4.3
FKRP-222ENST00000600834 ABCC9O60706 1549 aa41.17■■■■■ 4.18
FKRP-222ENST00000600834 DCAF8L2P0C7V8 631 aa39.66■■■■□ 3.94
FKRP-222ENST00000600834 RB1CC1Q8TDY2 1594 aa39.49■■■■□ 3.91
FKRP-222ENST00000600834 NACADO15069 1562 aa39.44■■■■□ 3.9
FKRP-222ENST00000600834 ZCCHC6Q5VYS8 1495 aaKnown RBP39.34■■■■□ 3.89
FKRP-222ENST00000600834 MYO15BQ96JP2 1530 aa39.15■■■■□ 3.86
FKRP-222ENST00000600834 DCAF1Q9Y4B6 1507 aa39.01■■■■□ 3.84
FKRP-222ENST00000600834 UNC13AQ9UPW8 1703 aa38.62■■■■□ 3.77
FKRP-222ENST00000600834 PABPN1Q86U42 306 aaKnown RBP eCLIP38.55■■■■□ 3.76
FKRP-222ENST00000600834 SCRIBQ14160 1630 aa38.36■■■■□ 3.73
FKRP-222ENST00000600834 BICRAQ9NZM4 1560 aa38.35■■■■□ 3.73
FKRP-222ENST00000600834 DNAJC5BQ9UF47 199 aa37.87■■■■□ 3.65
FKRP-222ENST00000600834 SHROOM4Q9ULL8 1493 aa37.79■■■■□ 3.64
FKRP-222ENST00000600834 EIF4G1Q04637 1599 aaKnown RBP37.31■■■■□ 3.56
FKRP-222ENST00000600834 CC2D2AQ9P2K1 1620 aa37.18■■■■□ 3.54
FKRP-222ENST00000600834 CECR2Q9BXF3 1484 aa36.94■■■■□ 3.5
FKRP-222ENST00000600834 SMARCA4P51532 1647 aa36.65■■■■□ 3.46
FKRP-222ENST00000600834 BAZ1AQ9NRL2 1556 aaPredicted RBP36.59■■■■□ 3.45
FKRP-222ENST00000600834 ATAD2BQ9ULI0 1458 aa36.48■■■■□ 3.43
FKRP-222ENST00000600834 MROH2BQ7Z745 1585 aa36.47■■■■□ 3.43
FKRP-222ENST00000600834 NCAPD3P42695 1498 aa36.43■■■■□ 3.42
FKRP-222ENST00000600834 SMARCA2P51531 1590 aa36.37■■■■□ 3.41
FKRP-222ENST00000600834 PEG3Q9GZU2 1588 aa36.23■■■■□ 3.39
FKRP-222ENST00000600834 HMGXB3Q12766 1538 aa36.19■■■■□ 3.38
FKRP-222ENST00000600834 BAZ1BQ9UIG0 1483 aaKnown RBP36.17■■■■□ 3.38
FKRP-222ENST00000600834 WIZO95785 1651 aa36.07■■■■□ 3.36
FKRP-222ENST00000600834 RSF1Q96T23 1441 aaPredicted RBP36.05■■■■□ 3.36
FKRP-222ENST00000600834 NESP48681 1621 aa35.64■■■■□ 3.3
FKRP-222ENST00000600834 TOP2AP11388 1531 aaKnown RBP35.62■■■■□ 3.29
FKRP-222ENST00000600834 ERCC6Q03468 1493 aa35.44■■■■□ 3.26
FKRP-222ENST00000600834 LAMC3Q9Y6N6 1575 aa35.42■■■■□ 3.26
FKRP-222ENST00000600834 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
FKRP-222ENST00000600834 CCDC88BA6NC98 1476 aa35.28■■■■□ 3.24
FKRP-222ENST00000600834 SUPT5HO00267 1087 aaKnown RBP35.27■■■■□ 3.24
FKRP-222ENST00000600834 PDS5BQ9NTI5 1447 aa35.23■■■■□ 3.23
FKRP-222ENST00000600834 CFTRP13569 1480 aa35.16■■■■□ 3.22
FKRP-222ENST00000600834 KIF21AQ7Z4S6 1674 aa35.14■■■■□ 3.22
FKRP-222ENST00000600834 THOC2Q8NI27 1593 aaKnown RBP35■■■■□ 3.19
FKRP-222ENST00000600834 CUX2O14529 1486 aa34.99■■■■□ 3.19
FKRP-222ENST00000600834 FANCD2Q9BXW9 1451 aa34.99■■■■□ 3.19
FKRP-222ENST00000600834 CEP164Q9UPV0 1460 aa34.92■■■■□ 3.18
FKRP-222ENST00000600834 MRC2Q9UBG0 1479 aa34.87■■■■□ 3.17
FKRP-222ENST00000600834 PRDM2Q13029 1718 aa34.81■■■■□ 3.16
FKRP-222ENST00000600834 WDR62O43379 1518 aa34.72■■■■□ 3.15
FKRP-222ENST00000600834 URB2Q14146 1524 aaKnown RBP34.65■■■■□ 3.14
FKRP-222ENST00000600834 TOPBP1Q92547 1522 aa34.44■■■■□ 3.1
FKRP-222ENST00000600834 ABCC8Q09428 1581 aa34.36■■■■□ 3.09
FKRP-222ENST00000600834 DNMBPQ6XZF7 1577 aa34.35■■■■□ 3.09
FKRP-222ENST00000600834 CUX1P39880 1505 aa34.2■■■■□ 3.06
FKRP-222ENST00000600834 IFT140Q96RY7 1462 aa34.19■■■■□ 3.06
FKRP-222ENST00000600834 POLA1P09884 1462 aaPredicted RBP34.14■■■■□ 3.06
FKRP-222ENST00000600834 ZNF608Q9ULD9 1512 aaPredicted RBP34.1■■■■□ 3.05
FKRP-222ENST00000600834 FGD5Q6ZNL6 1462 aa34.07■■■■□ 3.05
FKRP-222ENST00000600834 RAD54L2Q9Y4B4 1467 aa34.06■■■■□ 3.04
FKRP-222ENST00000600834 SOGA1O94964 1423 aa34.04■■■■□ 3.04
FKRP-222ENST00000600834 TARBP1Q13395 1621 aaKnown RBP34.03■■■■□ 3.04
FKRP-222ENST00000600834 DNAJC5Q9H3Z4 198 aa34.02■■■■□ 3.04
FKRP-222ENST00000600834 WRNQ14191 1432 aaPredicted RBP eCLIP33.97■■■■□ 3.03
FKRP-222ENST00000600834 AQRO60306 1485 aaKnown RBP eCLIP33.93■■■■□ 3.02
FKRP-222ENST00000600834 EIF4G3O43432 1585 aaKnown RBP33.89■■■■□ 3.02
FKRP-222ENST00000600834 SYNJ1O43426 1573 aa33.89■■■■□ 3.02
FKRP-222ENST00000600834 TDRD9Q8NDG6 1382 aaKnown RBP33.88■■■■□ 3.01
FKRP-222ENST00000600834 TOP2BQ02880 1626 aa33.85■■■■□ 3.01
FKRP-222ENST00000600834 BIVM-ERCC5R4GMW8 1640 aa33.83■■■■□ 3.01
FKRP-222ENST00000600834 WDR97A6NE52 1622 aa33.71■■■□□ 2.99
FKRP-222ENST00000600834 ABCA10Q8WWZ4 1543 aa33.7■■■□□ 2.99
FKRP-222ENST00000600834 OSCARQ8IYS5 282 aa33.65■■■□□ 2.98
FKRP-222ENST00000600834 GAPVD1Q14C86 1478 aa33.62■■■□□ 2.97
FKRP-222ENST00000600834 GRIN2BQ13224 1484 aa33.59■■■□□ 2.97
FKRP-222ENST00000600834 SNAPC4Q5SXM2 1469 aa33.57■■■□□ 2.97
FKRP-222ENST00000600834 FBLN2P98095 1184 aa33.57■■■□□ 2.96
FKRP-222ENST00000600834 ABCA5Q8WWZ7 1642 aa33.55■■■□□ 2.96
FKRP-222ENST00000600834 PBRM1Q86U86 1689 aa33.49■■■□□ 2.95
FKRP-222ENST00000600834 CHD1O14646 1710 aa33.48■■■□□ 2.95
FKRP-222ENST00000600834 MAGI1Q96QZ7 1491 aaPredicted RBP33.47■■■□□ 2.95
FKRP-222ENST00000600834 CHMP7Q8WUX9 453 aaPredicted RBP33.43■■■□□ 2.94
FKRP-222ENST00000600834 SYNJ2O15056 1496 aa33.36■■■□□ 2.93
FKRP-222ENST00000600834 ERICH3Q5RHP9 1530 aa33.28■■■□□ 2.92
FKRP-222ENST00000600834 TRIM41Q8WV44 630 aa33.25■■■□□ 2.91
FKRP-222ENST00000600834 KIF27Q86VH2 1401 aa33.25■■■□□ 2.91
FKRP-222ENST00000600834 ADAMTS12P58397 1594 aa33.24■■■□□ 2.91
FKRP-222ENST00000600834 FHAD1B1AJZ9 1412 aa33.21■■■□□ 2.91
FKRP-222ENST00000600834 IGF1RP08069 1367 aa33.17■■■□□ 2.9
FKRP-222ENST00000600834 GRIN2AQ12879 1464 aa33.16■■■□□ 2.9
FKRP-222ENST00000600834 CLASP1Q7Z460 1538 aa33.1■■■□□ 2.89
FKRP-222ENST00000600834 RIMBP3CA6NJZ7 1639 aa33.06■■■□□ 2.88
FKRP-222ENST00000600834 RIMBP3BA6NNM3 1639 aa33.06■■■□□ 2.88
FKRP-222ENST00000600834 RIMBP3Q9UFD9 1639 aa33.06■■■□□ 2.88
FKRP-222ENST00000600834 ARHGEF11O15085 1522 aa33.06■■■□□ 2.88
FKRP-222ENST00000600834 RUSC2Q8N2Y8 1516 aa33.06■■■□□ 2.88
FKRP-222ENST00000600834 CEP170Q5SW79 1584 aa33.01■■■□□ 2.88
FKRP-222ENST00000600834 NUP160Q12769 1436 aa33.01■■■□□ 2.87
FKRP-222ENST00000600834 CARMIL1Q5VZK9 1371 aa32.96■■■□□ 2.87
FKRP-222ENST00000600834 CUL7Q14999 1698 aa32.96■■■□□ 2.87
FKRP-222ENST00000600834 CHIC1Q5VXU3 224 aa32.88■■■□□ 2.85
FKRP-222ENST00000600834 CYB5RLQ6IPT4 315 aa32.86■■■□□ 2.85
FKRP-222ENST00000600834 ARAP1Q96P48 1450 aa32.81■■■□□ 2.84
FKRP-222ENST00000600834 JPH4Q96JJ6 628 aa32.75■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms