RNA–Protein interactions for RNA: ENST00000600813.1

LINC01872-203, Transcript of long intergenic non-protein coding RNA 1872, humanhuman

TSL 3

Gene LINC01872, Length 590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01872-203ENST00000600813 NISCHQ9Y2I1 1504 aa33.78■■■■□ 3
LINC01872-203ENST00000600813 CCDC180Q9P1Z9 1646 aa29.86■■■□□ 2.37
LINC01872-203ENST00000600813 ABCC9O60706 1549 aa29.38■■■□□ 2.29
LINC01872-203ENST00000600813 DCAF8L2P0C7V8 631 aa28.32■■■□□ 2.12
LINC01872-203ENST00000600813 RB1CC1Q8TDY2 1594 aa28.14■■■□□ 2.1
LINC01872-203ENST00000600813 NACADO15069 1562 aa28.13■■■□□ 2.09
LINC01872-203ENST00000600813 ZCCHC6Q5VYS8 1495 aaKnown RBP28.11■■■□□ 2.09
LINC01872-203ENST00000600813 MYO15BQ96JP2 1530 aa27.96■■■□□ 2.07
LINC01872-203ENST00000600813 DCAF1Q9Y4B6 1507 aa27.87■■■□□ 2.05
LINC01872-203ENST00000600813 PABPN1Q86U42 306 aaKnown RBP eCLIP27.57■■■□□ 2
LINC01872-203ENST00000600813 UNC13AQ9UPW8 1703 aa27.55■■■□□ 2
LINC01872-203ENST00000600813 BICRAQ9NZM4 1560 aa27.42■■□□□ 1.98
LINC01872-203ENST00000600813 SCRIBQ14160 1630 aa27.38■■□□□ 1.97
LINC01872-203ENST00000600813 DNAJC5BQ9UF47 199 aa27.13■■□□□ 1.93
LINC01872-203ENST00000600813 SHROOM4Q9ULL8 1493 aa26.93■■□□□ 1.9
LINC01872-203ENST00000600813 EIF4G1Q04637 1599 aaKnown RBP26.63■■□□□ 1.85
LINC01872-203ENST00000600813 CC2D2AQ9P2K1 1620 aa26.54■■□□□ 1.84
LINC01872-203ENST00000600813 CECR2Q9BXF3 1484 aa26.41■■□□□ 1.82
LINC01872-203ENST00000600813 SMARCA4P51532 1647 aa26.16■■□□□ 1.78
LINC01872-203ENST00000600813 BAZ1AQ9NRL2 1556 aaPredicted RBP26.1■■□□□ 1.77
LINC01872-203ENST00000600813 MROH2BQ7Z745 1585 aa26.08■■□□□ 1.77
LINC01872-203ENST00000600813 ATAD2BQ9ULI0 1458 aa26.07■■□□□ 1.76
LINC01872-203ENST00000600813 NCAPD3P42695 1498 aa26.04■■□□□ 1.76
LINC01872-203ENST00000600813 SMARCA2P51531 1590 aa25.94■■□□□ 1.74
LINC01872-203ENST00000600813 PEG3Q9GZU2 1588 aa25.89■■□□□ 1.73
LINC01872-203ENST00000600813 HMGXB3Q12766 1538 aa25.82■■□□□ 1.72
LINC01872-203ENST00000600813 RSF1Q96T23 1441 aaPredicted RBP25.8■■□□□ 1.72
LINC01872-203ENST00000600813 BAZ1BQ9UIG0 1483 aaKnown RBP25.79■■□□□ 1.72
LINC01872-203ENST00000600813 WIZO95785 1651 aa25.77■■□□□ 1.72
LINC01872-203ENST00000600813 NESP48681 1621 aa25.48■■□□□ 1.67
LINC01872-203ENST00000600813 TOP2AP11388 1531 aaKnown RBP25.43■■□□□ 1.66
LINC01872-203ENST00000600813 CADPSQ9ULU8 1353 aa25.3■■□□□ 1.64
LINC01872-203ENST00000600813 LAMC3Q9Y6N6 1575 aa25.26■■□□□ 1.63
LINC01872-203ENST00000600813 CCDC88BA6NC98 1476 aa25.23■■□□□ 1.63
LINC01872-203ENST00000600813 ERCC6Q03468 1493 aa25.23■■□□□ 1.63
LINC01872-203ENST00000600813 SUPT5HO00267 1087 aaKnown RBP25.23■■□□□ 1.63
LINC01872-203ENST00000600813 CFTRP13569 1480 aa25.14■■□□□ 1.61
LINC01872-203ENST00000600813 PDS5BQ9NTI5 1447 aa25.12■■□□□ 1.61
LINC01872-203ENST00000600813 KIF21AQ7Z4S6 1674 aa25.06■■□□□ 1.6
LINC01872-203ENST00000600813 FANCD2Q9BXW9 1451 aa24.97■■□□□ 1.59
LINC01872-203ENST00000600813 THOC2Q8NI27 1593 aaKnown RBP24.97■■□□□ 1.59
LINC01872-203ENST00000600813 CUX2O14529 1486 aa24.94■■□□□ 1.58
LINC01872-203ENST00000600813 CEP164Q9UPV0 1460 aa24.89■■□□□ 1.58
LINC01872-203ENST00000600813 MRC2Q9UBG0 1479 aa24.87■■□□□ 1.57
LINC01872-203ENST00000600813 PRDM2Q13029 1718 aa24.78■■□□□ 1.56
LINC01872-203ENST00000600813 WDR62O43379 1518 aa24.78■■□□□ 1.56
LINC01872-203ENST00000600813 URB2Q14146 1524 aaKnown RBP24.76■■□□□ 1.55
LINC01872-203ENST00000600813 TOPBP1Q92547 1522 aa24.59■■□□□ 1.53
LINC01872-203ENST00000600813 DNMBPQ6XZF7 1577 aa24.5■■□□□ 1.51
LINC01872-203ENST00000600813 ABCC8Q09428 1581 aa24.5■■□□□ 1.51
LINC01872-203ENST00000600813 CUX1P39880 1505 aa24.45■■□□□ 1.5
LINC01872-203ENST00000600813 POLA1P09884 1462 aaPredicted RBP24.39■■□□□ 1.5
LINC01872-203ENST00000600813 IFT140Q96RY7 1462 aa24.38■■□□□ 1.49
LINC01872-203ENST00000600813 ZNF608Q9ULD9 1512 aaPredicted RBP24.38■■□□□ 1.49
LINC01872-203ENST00000600813 RAD54L2Q9Y4B4 1467 aa24.35■■□□□ 1.49
LINC01872-203ENST00000600813 FGD5Q6ZNL6 1462 aa24.32■■□□□ 1.48
LINC01872-203ENST00000600813 SOGA1O94964 1423 aa24.31■■□□□ 1.48
LINC01872-203ENST00000600813 TARBP1Q13395 1621 aaKnown RBP24.31■■□□□ 1.48
LINC01872-203ENST00000600813 DNAJC5Q9H3Z4 198 aa24.29■■□□□ 1.48
LINC01872-203ENST00000600813 WRNQ14191 1432 aaPredicted RBP eCLIP24.27■■□□□ 1.48
LINC01872-203ENST00000600813 AQRO60306 1485 aaKnown RBP eCLIP24.26■■□□□ 1.47
LINC01872-203ENST00000600813 SYNJ1O43426 1573 aa24.22■■□□□ 1.47
LINC01872-203ENST00000600813 TDRD9Q8NDG6 1382 aaKnown RBP24.22■■□□□ 1.47
LINC01872-203ENST00000600813 TOP2BQ02880 1626 aa24.17■■□□□ 1.46
LINC01872-203ENST00000600813 EIF4G3O43432 1585 aaKnown RBP24.16■■□□□ 1.46
LINC01872-203ENST00000600813 BIVM-ERCC5R4GMW8 1640 aa24.15■■□□□ 1.46
LINC01872-203ENST00000600813 ABCA10Q8WWZ4 1543 aa24.07■■□□□ 1.44
LINC01872-203ENST00000600813 WDR97A6NE52 1622 aa24.06■■□□□ 1.44
LINC01872-203ENST00000600813 OSCARQ8IYS5 282 aa24.02■■□□□ 1.44
LINC01872-203ENST00000600813 GAPVD1Q14C86 1478 aa24■■□□□ 1.43
LINC01872-203ENST00000600813 GRIN2BQ13224 1484 aa23.96■■□□□ 1.43
LINC01872-203ENST00000600813 SNAPC4Q5SXM2 1469 aa23.96■■□□□ 1.43
LINC01872-203ENST00000600813 ABCA5Q8WWZ7 1642 aa23.95■■□□□ 1.42
LINC01872-203ENST00000600813 FBLN2P98095 1184 aa23.94■■□□□ 1.42
LINC01872-203ENST00000600813 MAGI1Q96QZ7 1491 aaPredicted RBP23.87■■□□□ 1.41
LINC01872-203ENST00000600813 PBRM1Q86U86 1689 aa23.86■■□□□ 1.41
LINC01872-203ENST00000600813 CHD1O14646 1710 aa23.85■■□□□ 1.41
LINC01872-203ENST00000600813 CHMP7Q8WUX9 453 aaPredicted RBP23.85■■□□□ 1.41
LINC01872-203ENST00000600813 SYNJ2O15056 1496 aa23.81■■□□□ 1.4
LINC01872-203ENST00000600813 TRIM41Q8WV44 630 aa23.77■■□□□ 1.4
LINC01872-203ENST00000600813 IGF1RP08069 1367 aa23.75■■□□□ 1.39
LINC01872-203ENST00000600813 ERICH3Q5RHP9 1530 aa23.74■■□□□ 1.39
LINC01872-203ENST00000600813 KIF27Q86VH2 1401 aa23.73■■□□□ 1.39
LINC01872-203ENST00000600813 ADAMTS12P58397 1594 aa23.71■■□□□ 1.39
LINC01872-203ENST00000600813 FHAD1B1AJZ9 1412 aa23.71■■□□□ 1.39
LINC01872-203ENST00000600813 RUSC2Q8N2Y8 1516 aa23.69■■□□□ 1.38
LINC01872-203ENST00000600813 GRIN2AQ12879 1464 aa23.67■■□□□ 1.38
LINC01872-203ENST00000600813 CLASP1Q7Z460 1538 aa23.63■■□□□ 1.37
LINC01872-203ENST00000600813 CHIC1Q5VXU3 224 aa23.58■■□□□ 1.37
LINC01872-203ENST00000600813 ARHGEF11O15085 1522 aa23.58■■□□□ 1.36
LINC01872-203ENST00000600813 NUP160Q12769 1436 aa23.58■■□□□ 1.36
LINC01872-203ENST00000600813 CEP170Q5SW79 1584 aa23.57■■□□□ 1.36
LINC01872-203ENST00000600813 RIMBP3CA6NJZ7 1639 aa23.57■■□□□ 1.36
LINC01872-203ENST00000600813 RIMBP3BA6NNM3 1639 aa23.57■■□□□ 1.36
LINC01872-203ENST00000600813 RIMBP3Q9UFD9 1639 aa23.57■■□□□ 1.36
LINC01872-203ENST00000600813 CARMIL1Q5VZK9 1371 aa23.55■■□□□ 1.36
LINC01872-203ENST00000600813 CUL7Q14999 1698 aa23.48■■□□□ 1.35
LINC01872-203ENST00000600813 CYB5RLQ6IPT4 315 aa23.47■■□□□ 1.35
LINC01872-203ENST00000600813 ARAP1Q96P48 1450 aa23.43■■□□□ 1.34
LINC01872-203ENST00000600813 JPH4Q96JJ6 628 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms