RNA–Protein interactions for RNA: ENST00000600645.1

NUP62-221, Transcript of nucleoporin 62, humanhuman

TSL 4

Gene NUP62, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP62-221ENST00000600645 NISCHQ9Y2I1 1504 aa35.86■■■■□ 3.33
NUP62-221ENST00000600645 ABCC9O60706 1549 aa32.1■■■□□ 2.73
NUP62-221ENST00000600645 CCDC180Q9P1Z9 1646 aa32.05■■■□□ 2.72
NUP62-221ENST00000600645 RB1CC1Q8TDY2 1594 aa30.54■■■□□ 2.48
NUP62-221ENST00000600645 NACADO15069 1562 aa30.36■■■□□ 2.45
NUP62-221ENST00000600645 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
NUP62-221ENST00000600645 DNAJC5BQ9UF47 199 aa30.15■■■□□ 2.42
NUP62-221ENST00000600645 MYO15BQ96JP2 1530 aa29.98■■■□□ 2.39
NUP62-221ENST00000600645 PABPN1Q86U42 306 aaKnown RBP eCLIP29.96■■■□□ 2.39
NUP62-221ENST00000600645 UNC13AQ9UPW8 1703 aa29.77■■■□□ 2.36
NUP62-221ENST00000600645 ZCCHC6Q5VYS8 1495 aaKnown RBP29.71■■■□□ 2.35
NUP62-221ENST00000600645 BICRAQ9NZM4 1560 aa29.67■■■□□ 2.34
NUP62-221ENST00000600645 DCAF1Q9Y4B6 1507 aa29.61■■■□□ 2.33
NUP62-221ENST00000600645 SHROOM4Q9ULL8 1493 aa29.26■■■□□ 2.27
NUP62-221ENST00000600645 SCRIBQ14160 1630 aa29.25■■■□□ 2.27
NUP62-221ENST00000600645 CC2D2AQ9P2K1 1620 aa28.96■■■□□ 2.23
NUP62-221ENST00000600645 EIF4G1Q04637 1599 aaKnown RBP28.92■■■□□ 2.22
NUP62-221ENST00000600645 CECR2Q9BXF3 1484 aa28.91■■■□□ 2.22
NUP62-221ENST00000600645 NCAPD3P42695 1498 aa28.08■■■□□ 2.09
NUP62-221ENST00000600645 ATAD2BQ9ULI0 1458 aa27.99■■■□□ 2.07
NUP62-221ENST00000600645 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
NUP62-221ENST00000600645 SMARCA2P51531 1590 aa27.87■■■□□ 2.05
NUP62-221ENST00000600645 HMGXB3Q12766 1538 aa27.81■■■□□ 2.04
NUP62-221ENST00000600645 BAZ1AQ9NRL2 1556 aaPredicted RBP27.81■■■□□ 2.04
NUP62-221ENST00000600645 ERCC6Q03468 1493 aa27.7■■■□□ 2.02
NUP62-221ENST00000600645 BAZ1BQ9UIG0 1483 aaKnown RBP27.69■■■□□ 2.02
NUP62-221ENST00000600645 PEG3Q9GZU2 1588 aa27.66■■■□□ 2.02
NUP62-221ENST00000600645 MROH2BQ7Z745 1585 aa27.64■■■□□ 2.01
NUP62-221ENST00000600645 DNAJC5Q9H3Z4 198 aa27.63■■■□□ 2.01
NUP62-221ENST00000600645 CUX2O14529 1486 aa27.63■■■□□ 2.01
NUP62-221ENST00000600645 NESP48681 1621 aa27.59■■■□□ 2.01
NUP62-221ENST00000600645 LAMC3Q9Y6N6 1575 aa27.37■■□□□ 1.97
NUP62-221ENST00000600645 WIZO95785 1651 aa27.27■■□□□ 1.96
NUP62-221ENST00000600645 PDS5BQ9NTI5 1447 aa27.26■■□□□ 1.95
NUP62-221ENST00000600645 CADPSQ9ULU8 1353 aa27.24■■□□□ 1.95
NUP62-221ENST00000600645 THOC2Q8NI27 1593 aaKnown RBP27.23■■□□□ 1.95
NUP62-221ENST00000600645 KIF21AQ7Z4S6 1674 aa27.15■■□□□ 1.94
NUP62-221ENST00000600645 RSF1Q96T23 1441 aaPredicted RBP27.12■■□□□ 1.93
NUP62-221ENST00000600645 MRC2Q9UBG0 1479 aa27■■□□□ 1.91
NUP62-221ENST00000600645 TOP2AP11388 1531 aaKnown RBP26.93■■□□□ 1.9
NUP62-221ENST00000600645 CFTRP13569 1480 aa26.93■■□□□ 1.9
NUP62-221ENST00000600645 WDR62O43379 1518 aa26.9■■□□□ 1.9
NUP62-221ENST00000600645 FANCD2Q9BXW9 1451 aa26.9■■□□□ 1.9
NUP62-221ENST00000600645 CEP164Q9UPV0 1460 aa26.89■■□□□ 1.9
NUP62-221ENST00000600645 CCDC88BA6NC98 1476 aa26.68■■□□□ 1.86
NUP62-221ENST00000600645 URB2Q14146 1524 aaKnown RBP26.67■■□□□ 1.86
NUP62-221ENST00000600645 PRDM2Q13029 1718 aa26.49■■□□□ 1.83
NUP62-221ENST00000600645 OSCARQ8IYS5 282 aa26.45■■□□□ 1.82
NUP62-221ENST00000600645 TRIM41Q8WV44 630 aa26.41■■□□□ 1.82
NUP62-221ENST00000600645 TOPBP1Q92547 1522 aa26.39■■□□□ 1.81
NUP62-221ENST00000600645 IFT140Q96RY7 1462 aa26.37■■□□□ 1.81
NUP62-221ENST00000600645 ZNF608Q9ULD9 1512 aaPredicted RBP26.34■■□□□ 1.81
NUP62-221ENST00000600645 ABCC8Q09428 1581 aa26.33■■□□□ 1.81
NUP62-221ENST00000600645 DNMBPQ6XZF7 1577 aa26.26■■□□□ 1.79
NUP62-221ENST00000600645 AQRO60306 1485 aaKnown RBP eCLIP26.13■■□□□ 1.77
NUP62-221ENST00000600645 EIF4G3O43432 1585 aaKnown RBP26.12■■□□□ 1.77
NUP62-221ENST00000600645 POLA1P09884 1462 aaPredicted RBP26.12■■□□□ 1.77
NUP62-221ENST00000600645 TARBP1Q13395 1621 aaKnown RBP26.12■■□□□ 1.77
NUP62-221ENST00000600645 RAD54L2Q9Y4B4 1467 aa26.04■■□□□ 1.76
NUP62-221ENST00000600645 SOGA1O94964 1423 aa26.04■■□□□ 1.76
NUP62-221ENST00000600645 RIMBP3CA6NJZ7 1639 aa25.99■■□□□ 1.75
NUP62-221ENST00000600645 RIMBP3BA6NNM3 1639 aa25.99■■□□□ 1.75
NUP62-221ENST00000600645 RIMBP3Q9UFD9 1639 aa25.99■■□□□ 1.75
NUP62-221ENST00000600645 TDRD9Q8NDG6 1382 aaKnown RBP25.99■■□□□ 1.75
NUP62-221ENST00000600645 SUPT5HO00267 1087 aaKnown RBP25.99■■□□□ 1.75
NUP62-221ENST00000600645 FBLN2P98095 1184 aa25.97■■□□□ 1.75
NUP62-221ENST00000600645 FGD5Q6ZNL6 1462 aa25.96■■□□□ 1.75
NUP62-221ENST00000600645 ARHGEF11O15085 1522 aa25.95■■□□□ 1.74
NUP62-221ENST00000600645 CUX1P39880 1505 aa25.95■■□□□ 1.74
NUP62-221ENST00000600645 CHD1O14646 1710 aa25.88■■□□□ 1.73
NUP62-221ENST00000600645 CYB5RLQ6IPT4 315 aa25.83■■□□□ 1.73
NUP62-221ENST00000600645 WDR97A6NE52 1622 aa25.83■■□□□ 1.73
NUP62-221ENST00000600645 SNAPC4Q5SXM2 1469 aa25.82■■□□□ 1.72
NUP62-221ENST00000600645 CHMP7Q8WUX9 453 aaPredicted RBP25.79■■□□□ 1.72
NUP62-221ENST00000600645 GRIN2BQ13224 1484 aa25.78■■□□□ 1.72
NUP62-221ENST00000600645 MAGI1Q96QZ7 1491 aaPredicted RBP25.76■■□□□ 1.71
NUP62-221ENST00000600645 ARAP1Q96P48 1450 aa25.71■■□□□ 1.71
NUP62-221ENST00000600645 GAPVD1Q14C86 1478 aa25.7■■□□□ 1.7
NUP62-221ENST00000600645 ABCA10Q8WWZ4 1543 aa25.68■■□□□ 1.7
NUP62-221ENST00000600645 SYNJ2O15056 1496 aa25.68■■□□□ 1.7
NUP62-221ENST00000600645 CLASP1Q7Z460 1538 aa25.66■■□□□ 1.7
NUP62-221ENST00000600645 SYNJ1O43426 1573 aa25.63■■□□□ 1.69
NUP62-221ENST00000600645 WRNQ14191 1432 aaPredicted RBP eCLIP25.62■■□□□ 1.69
NUP62-221ENST00000600645 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
NUP62-221ENST00000600645 PBRM1Q86U86 1689 aa25.58■■□□□ 1.68
NUP62-221ENST00000600645 TOP2BQ02880 1626 aa25.52■■□□□ 1.68
NUP62-221ENST00000600645 TRHP20396 242 aaPredicted RBP25.51■■□□□ 1.67
NUP62-221ENST00000600645 BIVM-ERCC5R4GMW8 1640 aa25.49■■□□□ 1.67
NUP62-221ENST00000600645 GRIN2AQ12879 1464 aa25.44■■□□□ 1.66
NUP62-221ENST00000600645 FHAD1B1AJZ9 1412 aa25.38■■□□□ 1.65
NUP62-221ENST00000600645 ADAMTS12P58397 1594 aa25.38■■□□□ 1.65
NUP62-221ENST00000600645 NUP160Q12769 1436 aa25.37■■□□□ 1.65
NUP62-221ENST00000600645 ERICH3Q5RHP9 1530 aa25.34■■□□□ 1.65
NUP62-221ENST00000600645 CEP170Q5SW79 1584 aa25.32■■□□□ 1.64
NUP62-221ENST00000600645 ERCC6L2Q5T890 1561 aa25.27■■□□□ 1.64
NUP62-221ENST00000600645 SHROOM2Q13796 1616 aa25.19■■□□□ 1.62
NUP62-221ENST00000600645 JPH4Q96JJ6 628 aa25.17■■□□□ 1.62
NUP62-221ENST00000600645 PRG4Q92954 1404 aaPredicted RBP25.13■■□□□ 1.61
NUP62-221ENST00000600645 IGF1RP08069 1367 aa25.12■■□□□ 1.61
NUP62-221ENST00000600645 KIF27Q86VH2 1401 aa25.08■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms