RNA–Protein interactions for RNA: ENST00000600454.2

Metazoa_SRP.25-201, humanhuman

BASIC

Gene Metazoa_SRP, Length 283 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Metazoa_SRP.25-201ENST00000600454 NISCHQ9Y2I1 1504 aa26.55■■□□□ 1.84
Metazoa_SRP.25-201ENST00000600454 CCDC180Q9P1Z9 1646 aa23.69■■□□□ 1.38
Metazoa_SRP.25-201ENST00000600454 ABCC9O60706 1549 aa23.23■■□□□ 1.31
Metazoa_SRP.25-201ENST00000600454 RB1CC1Q8TDY2 1594 aa22.29■■□□□ 1.16
Metazoa_SRP.25-201ENST00000600454 NACADO15069 1562 aa22.24■■□□□ 1.15
Metazoa_SRP.25-201ENST00000600454 ZCCHC6Q5VYS8 1495 aaKnown RBP22.12■■□□□ 1.13
Metazoa_SRP.25-201ENST00000600454 MYO15BQ96JP2 1530 aa22.07■■□□□ 1.12
Metazoa_SRP.25-201ENST00000600454 DCAF8L2P0C7V8 631 aa22.07■■□□□ 1.12
Metazoa_SRP.25-201ENST00000600454 DCAF1Q9Y4B6 1507 aa21.96■■□□□ 1.11
Metazoa_SRP.25-201ENST00000600454 UNC13AQ9UPW8 1703 aa21.94■■□□□ 1.1
Metazoa_SRP.25-201ENST00000600454 BICRAQ9NZM4 1560 aa21.71■■□□□ 1.07
Metazoa_SRP.25-201ENST00000600454 PABPN1Q86U42 306 aaKnown RBP eCLIP21.65■■□□□ 1.06
Metazoa_SRP.25-201ENST00000600454 SCRIBQ14160 1630 aa21.61■■□□□ 1.05
Metazoa_SRP.25-201ENST00000600454 DNAJC5BQ9UF47 199 aa21.43■■□□□ 1.02
Metazoa_SRP.25-201ENST00000600454 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
Metazoa_SRP.25-201ENST00000600454 EIF4G1Q04637 1599 aaKnown RBP21.1■□□□□ 0.97
Metazoa_SRP.25-201ENST00000600454 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
Metazoa_SRP.25-201ENST00000600454 CECR2Q9BXF3 1484 aa20.88■□□□□ 0.93
Metazoa_SRP.25-201ENST00000600454 SMARCA4P51532 1647 aa20.66■□□□□ 0.9
Metazoa_SRP.25-201ENST00000600454 BAZ1AQ9NRL2 1556 aaPredicted RBP20.56■□□□□ 0.88
Metazoa_SRP.25-201ENST00000600454 ATAD2BQ9ULI0 1458 aa20.53■□□□□ 0.88
Metazoa_SRP.25-201ENST00000600454 NCAPD3P42695 1498 aa20.51■□□□□ 0.87
Metazoa_SRP.25-201ENST00000600454 SMARCA2P51531 1590 aa20.48■□□□□ 0.87
Metazoa_SRP.25-201ENST00000600454 MROH2BQ7Z745 1585 aa20.48■□□□□ 0.87
Metazoa_SRP.25-201ENST00000600454 PEG3Q9GZU2 1588 aa20.46■□□□□ 0.87
Metazoa_SRP.25-201ENST00000600454 HMGXB3Q12766 1538 aa20.44■□□□□ 0.86
Metazoa_SRP.25-201ENST00000600454 BAZ1BQ9UIG0 1483 aaKnown RBP20.33■□□□□ 0.85
Metazoa_SRP.25-201ENST00000600454 WIZO95785 1651 aa20.28■□□□□ 0.84
Metazoa_SRP.25-201ENST00000600454 RSF1Q96T23 1441 aaPredicted RBP20.17■□□□□ 0.82
Metazoa_SRP.25-201ENST00000600454 NESP48681 1621 aa20.11■□□□□ 0.81
Metazoa_SRP.25-201ENST00000600454 TOP2AP11388 1531 aaKnown RBP20.02■□□□□ 0.8
Metazoa_SRP.25-201ENST00000600454 LAMC3Q9Y6N6 1575 aa20.01■□□□□ 0.79
Metazoa_SRP.25-201ENST00000600454 ERCC6Q03468 1493 aa19.99■□□□□ 0.79
Metazoa_SRP.25-201ENST00000600454 KIF21AQ7Z4S6 1674 aa19.92■□□□□ 0.78
Metazoa_SRP.25-201ENST00000600454 CADPSQ9ULU8 1353 aa19.88■□□□□ 0.77
Metazoa_SRP.25-201ENST00000600454 THOC2Q8NI27 1593 aaKnown RBP19.87■□□□□ 0.77
Metazoa_SRP.25-201ENST00000600454 CUX2O14529 1486 aa19.84■□□□□ 0.77
Metazoa_SRP.25-201ENST00000600454 PDS5BQ9NTI5 1447 aa19.81■□□□□ 0.76
Metazoa_SRP.25-201ENST00000600454 CFTRP13569 1480 aa19.78■□□□□ 0.76
Metazoa_SRP.25-201ENST00000600454 CCDC88BA6NC98 1476 aa19.77■□□□□ 0.76
Metazoa_SRP.25-201ENST00000600454 PRDM2Q13029 1718 aa19.73■□□□□ 0.75
Metazoa_SRP.25-201ENST00000600454 FANCD2Q9BXW9 1451 aa19.68■□□□□ 0.74
Metazoa_SRP.25-201ENST00000600454 MRC2Q9UBG0 1479 aa19.67■□□□□ 0.74
Metazoa_SRP.25-201ENST00000600454 CEP164Q9UPV0 1460 aa19.67■□□□□ 0.74
Metazoa_SRP.25-201ENST00000600454 WDR62O43379 1518 aa19.66■□□□□ 0.74
Metazoa_SRP.25-201ENST00000600454 URB2Q14146 1524 aaKnown RBP19.54■□□□□ 0.72
Metazoa_SRP.25-201ENST00000600454 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
Metazoa_SRP.25-201ENST00000600454 TOPBP1Q92547 1522 aa19.38■□□□□ 0.69
Metazoa_SRP.25-201ENST00000600454 DNMBPQ6XZF7 1577 aa19.36■□□□□ 0.69
Metazoa_SRP.25-201ENST00000600454 DNAJC5Q9H3Z4 198 aa19.31■□□□□ 0.68
Metazoa_SRP.25-201ENST00000600454 ABCC8Q09428 1581 aa19.29■□□□□ 0.68
Metazoa_SRP.25-201ENST00000600454 IFT140Q96RY7 1462 aa19.24■□□□□ 0.67
Metazoa_SRP.25-201ENST00000600454 ZNF608Q9ULD9 1512 aaPredicted RBP19.24■□□□□ 0.67
Metazoa_SRP.25-201ENST00000600454 TARBP1Q13395 1621 aaKnown RBP19.23■□□□□ 0.67
Metazoa_SRP.25-201ENST00000600454 CUX1P39880 1505 aa19.22■□□□□ 0.67
Metazoa_SRP.25-201ENST00000600454 POLA1P09884 1462 aaPredicted RBP19.22■□□□□ 0.67
Metazoa_SRP.25-201ENST00000600454 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
Metazoa_SRP.25-201ENST00000600454 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
Metazoa_SRP.25-201ENST00000600454 RAD54L2Q9Y4B4 1467 aa19.13■□□□□ 0.65
Metazoa_SRP.25-201ENST00000600454 WDR97A6NE52 1622 aa19.08■□□□□ 0.65
Metazoa_SRP.25-201ENST00000600454 AQRO60306 1485 aaKnown RBP eCLIP19.07■□□□□ 0.64
Metazoa_SRP.25-201ENST00000600454 SOGA1O94964 1423 aa19.07■□□□□ 0.64
Metazoa_SRP.25-201ENST00000600454 BIVM-ERCC5R4GMW8 1640 aa19.05■□□□□ 0.64
Metazoa_SRP.25-201ENST00000600454 SYNJ1O43426 1573 aa19.05■□□□□ 0.64
Metazoa_SRP.25-201ENST00000600454 TOP2BQ02880 1626 aa19.02■□□□□ 0.64
Metazoa_SRP.25-201ENST00000600454 TDRD9Q8NDG6 1382 aaKnown RBP18.99■□□□□ 0.63
Metazoa_SRP.25-201ENST00000600454 WRNQ14191 1432 aaPredicted RBP eCLIP18.99■□□□□ 0.63
Metazoa_SRP.25-201ENST00000600454 CHD1O14646 1710 aa18.98■□□□□ 0.63
Metazoa_SRP.25-201ENST00000600454 ABCA5Q8WWZ7 1642 aa18.95■□□□□ 0.62
Metazoa_SRP.25-201ENST00000600454 ABCA10Q8WWZ4 1543 aa18.95■□□□□ 0.62
Metazoa_SRP.25-201ENST00000600454 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
Metazoa_SRP.25-201ENST00000600454 SNAPC4Q5SXM2 1469 aa18.9■□□□□ 0.62
Metazoa_SRP.25-201ENST00000600454 OSCARQ8IYS5 282 aa18.9■□□□□ 0.62
Metazoa_SRP.25-201ENST00000600454 GRIN2BQ13224 1484 aa18.88■□□□□ 0.61
Metazoa_SRP.25-201ENST00000600454 GAPVD1Q14C86 1478 aa18.87■□□□□ 0.61
Metazoa_SRP.25-201ENST00000600454 MAGI1Q96QZ7 1491 aaPredicted RBP18.85■□□□□ 0.61
Metazoa_SRP.25-201ENST00000600454 SYNJ2O15056 1496 aa18.78■□□□□ 0.6
Metazoa_SRP.25-201ENST00000600454 RIMBP3CA6NJZ7 1639 aa18.77■□□□□ 0.6
Metazoa_SRP.25-201ENST00000600454 RIMBP3BA6NNM3 1639 aa18.77■□□□□ 0.6
Metazoa_SRP.25-201ENST00000600454 RIMBP3Q9UFD9 1639 aa18.77■□□□□ 0.6
Metazoa_SRP.25-201ENST00000600454 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
Metazoa_SRP.25-201ENST00000600454 FBLN2P98095 1184 aa18.76■□□□□ 0.59
Metazoa_SRP.25-201ENST00000600454 CLASP1Q7Z460 1538 aa18.74■□□□□ 0.59
Metazoa_SRP.25-201ENST00000600454 ARHGEF11O15085 1522 aa18.73■□□□□ 0.59
Metazoa_SRP.25-201ENST00000600454 ERICH3Q5RHP9 1530 aa18.71■□□□□ 0.59
Metazoa_SRP.25-201ENST00000600454 CHMP7Q8WUX9 453 aaPredicted RBP18.69■□□□□ 0.58
Metazoa_SRP.25-201ENST00000600454 GRIN2AQ12879 1464 aa18.67■□□□□ 0.58
Metazoa_SRP.25-201ENST00000600454 FHAD1B1AJZ9 1412 aa18.64■□□□□ 0.57
Metazoa_SRP.25-201ENST00000600454 CEP170Q5SW79 1584 aa18.63■□□□□ 0.57
Metazoa_SRP.25-201ENST00000600454 TRIM41Q8WV44 630 aa18.61■□□□□ 0.57
Metazoa_SRP.25-201ENST00000600454 NUP160Q12769 1436 aa18.59■□□□□ 0.57
Metazoa_SRP.25-201ENST00000600454 ARAP1Q96P48 1450 aa18.58■□□□□ 0.57
Metazoa_SRP.25-201ENST00000600454 KIF27Q86VH2 1401 aa18.57■□□□□ 0.56
Metazoa_SRP.25-201ENST00000600454 CUL7Q14999 1698 aa18.55■□□□□ 0.56
Metazoa_SRP.25-201ENST00000600454 IGF1RP08069 1367 aa18.53■□□□□ 0.56
Metazoa_SRP.25-201ENST00000600454 SHROOM2Q13796 1616 aa18.52■□□□□ 0.55
Metazoa_SRP.25-201ENST00000600454 ERCC6L2Q5T890 1561 aa18.51■□□□□ 0.55
Metazoa_SRP.25-201ENST00000600454 RUSC2Q8N2Y8 1516 aa18.5■□□□□ 0.55
Metazoa_SRP.25-201ENST00000600454 CYB5RLQ6IPT4 315 aa18.46■□□□□ 0.55
Metazoa_SRP.25-201ENST00000600454 CARMIL1Q5VZK9 1371 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms