RNA–Protein interactions for RNA: ENST00000600442.5

ZNF548-210, Transcript of zinc finger protein 548, humanhuman

TSL 4

Gene ZNF548, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548-210ENST00000600442 NISCHQ9Y2I1 1504 aa28.83■■■□□ 2.21
ZNF548-210ENST00000600442 ABCC9O60706 1549 aa26.19■■□□□ 1.78
ZNF548-210ENST00000600442 CCDC180Q9P1Z9 1646 aa25.9■■□□□ 1.74
ZNF548-210ENST00000600442 DNAJC5BQ9UF47 199 aa24.86■■□□□ 1.57
ZNF548-210ENST00000600442 RB1CC1Q8TDY2 1594 aa24.79■■□□□ 1.56
ZNF548-210ENST00000600442 NACADO15069 1562 aa24.54■■□□□ 1.52
ZNF548-210ENST00000600442 DCAF8L2P0C7V8 631 aa24.44■■□□□ 1.5
ZNF548-210ENST00000600442 PABPN1Q86U42 306 aaKnown RBP eCLIP24.36■■□□□ 1.49
ZNF548-210ENST00000600442 UNC13AQ9UPW8 1703 aa24.31■■□□□ 1.48
ZNF548-210ENST00000600442 ZCCHC6Q5VYS8 1495 aaKnown RBP24.15■■□□□ 1.46
ZNF548-210ENST00000600442 MYO15BQ96JP2 1530 aa24.1■■□□□ 1.45
ZNF548-210ENST00000600442 BICRAQ9NZM4 1560 aa24.09■■□□□ 1.45
ZNF548-210ENST00000600442 DCAF1Q9Y4B6 1507 aa23.91■■□□□ 1.42
ZNF548-210ENST00000600442 SHROOM4Q9ULL8 1493 aa23.67■■□□□ 1.38
ZNF548-210ENST00000600442 CC2D2AQ9P2K1 1620 aa23.65■■□□□ 1.38
ZNF548-210ENST00000600442 CECR2Q9BXF3 1484 aa23.61■■□□□ 1.37
ZNF548-210ENST00000600442 SCRIBQ14160 1630 aa23.59■■□□□ 1.37
ZNF548-210ENST00000600442 EIF4G1Q04637 1599 aaKnown RBP23.52■■□□□ 1.36
ZNF548-210ENST00000600442 DNAJC5Q9H3Z4 198 aa23.01■■□□□ 1.27
ZNF548-210ENST00000600442 NCAPD3P42695 1498 aa22.66■■□□□ 1.22
ZNF548-210ENST00000600442 CUX2O14529 1486 aa22.65■■□□□ 1.22
ZNF548-210ENST00000600442 ERCC6Q03468 1493 aa22.61■■□□□ 1.21
ZNF548-210ENST00000600442 ATAD2BQ9ULI0 1458 aa22.56■■□□□ 1.2
ZNF548-210ENST00000600442 SUPT5HO00267 1087 aaKnown RBP22.5■■□□□ 1.19
ZNF548-210ENST00000600442 SMARCA2P51531 1590 aa22.47■■□□□ 1.19
ZNF548-210ENST00000600442 SMARCA4P51532 1647 aa22.47■■□□□ 1.19
ZNF548-210ENST00000600442 HMGXB3Q12766 1538 aa22.45■■□□□ 1.18
ZNF548-210ENST00000600442 NESP48681 1621 aa22.42■■□□□ 1.18
ZNF548-210ENST00000600442 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.17
ZNF548-210ENST00000600442 BAZ1BQ9UIG0 1483 aaKnown RBP22.32■■□□□ 1.16
ZNF548-210ENST00000600442 RSF1Q96T23 1441 aaPredicted RBP22.29■■□□□ 1.16
ZNF548-210ENST00000600442 PEG3Q9GZU2 1588 aa22.25■■□□□ 1.15
ZNF548-210ENST00000600442 THOC2Q8NI27 1593 aaKnown RBP22.23■■□□□ 1.15
ZNF548-210ENST00000600442 LAMC3Q9Y6N6 1575 aa22.2■■□□□ 1.14
ZNF548-210ENST00000600442 MROH2BQ7Z745 1585 aa22.18■■□□□ 1.14
ZNF548-210ENST00000600442 KIF21AQ7Z4S6 1674 aa22.15■■□□□ 1.14
ZNF548-210ENST00000600442 PDS5BQ9NTI5 1447 aa22.07■■□□□ 1.12
ZNF548-210ENST00000600442 CADPSQ9ULU8 1353 aa21.97■■□□□ 1.11
ZNF548-210ENST00000600442 WIZO95785 1651 aa21.94■■□□□ 1.1
ZNF548-210ENST00000600442 MRC2Q9UBG0 1479 aa21.9■■□□□ 1.1
ZNF548-210ENST00000600442 TRIM41Q8WV44 630 aa21.89■■□□□ 1.09
ZNF548-210ENST00000600442 WDR62O43379 1518 aa21.85■■□□□ 1.09
ZNF548-210ENST00000600442 TOP2AP11388 1531 aaKnown RBP21.85■■□□□ 1.09
ZNF548-210ENST00000600442 CEP164Q9UPV0 1460 aa21.76■■□□□ 1.07
ZNF548-210ENST00000600442 FANCD2Q9BXW9 1451 aa21.71■■□□□ 1.07
ZNF548-210ENST00000600442 CFTRP13569 1480 aa21.65■■□□□ 1.06
ZNF548-210ENST00000600442 OSCARQ8IYS5 282 aa21.62■■□□□ 1.05
ZNF548-210ENST00000600442 CCDC88BA6NC98 1476 aa21.6■■□□□ 1.05
ZNF548-210ENST00000600442 URB2Q14146 1524 aaKnown RBP21.56■■□□□ 1.04
ZNF548-210ENST00000600442 PRDM2Q13029 1718 aa21.46■■□□□ 1.03
ZNF548-210ENST00000600442 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
ZNF548-210ENST00000600442 RIMBP3CA6NJZ7 1639 aa21.36■■□□□ 1.01
ZNF548-210ENST00000600442 RIMBP3BA6NNM3 1639 aa21.36■■□□□ 1.01
ZNF548-210ENST00000600442 RIMBP3Q9UFD9 1639 aa21.36■■□□□ 1.01
ZNF548-210ENST00000600442 ZNF608Q9ULD9 1512 aaPredicted RBP21.35■■□□□ 1.01
ZNF548-210ENST00000600442 IFT140Q96RY7 1462 aa21.33■■□□□ 1.01
ZNF548-210ENST00000600442 TOPBP1Q92547 1522 aa21.28■■□□□ 1
ZNF548-210ENST00000600442 ARHGEF11O15085 1522 aa21.24■□□□□ 0.99
ZNF548-210ENST00000600442 ABCC8Q09428 1581 aa21.21■□□□□ 0.99
ZNF548-210ENST00000600442 EIF4G3O43432 1585 aaKnown RBP21.2■□□□□ 0.98
ZNF548-210ENST00000600442 DNMBPQ6XZF7 1577 aa21.17■□□□□ 0.98
ZNF548-210ENST00000600442 CYB5RLQ6IPT4 315 aa21.15■□□□□ 0.98
ZNF548-210ENST00000600442 CHD1O14646 1710 aa21.15■□□□□ 0.98
ZNF548-210ENST00000600442 AQRO60306 1485 aaKnown RBP eCLIP21.13■□□□□ 0.974e-10■■■■■ 60.8
ZNF548-210ENST00000600442 TARBP1Q13395 1621 aaKnown RBP21.13■□□□□ 0.97
ZNF548-210ENST00000600442 FBLN2P98095 1184 aa21.07■□□□□ 0.96
ZNF548-210ENST00000600442 WRNQ14191 1432 aaPredicted RBP eCLIP21.06■□□□□ 0.96
ZNF548-210ENST00000600442 POLA1P09884 1462 aaPredicted RBP21.04■□□□□ 0.96
ZNF548-210ENST00000600442 ARAP1Q96P48 1450 aa21.01■□□□□ 0.95
ZNF548-210ENST00000600442 TRHP20396 242 aaPredicted RBP21■□□□□ 0.95
ZNF548-210ENST00000600442 RAD54L2Q9Y4B4 1467 aa20.99■□□□□ 0.95
ZNF548-210ENST00000600442 TDRD9Q8NDG6 1382 aaKnown RBP20.97■□□□□ 0.95
ZNF548-210ENST00000600442 SOGA1O94964 1423 aa20.95■□□□□ 0.95
ZNF548-210ENST00000600442 SNAPC4Q5SXM2 1469 aa20.88■□□□□ 0.93
ZNF548-210ENST00000600442 FGD5Q6ZNL6 1462 aa20.87■□□□□ 0.93
ZNF548-210ENST00000600442 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
ZNF548-210ENST00000600442 WDR97A6NE52 1622 aa20.85■□□□□ 0.93
ZNF548-210ENST00000600442 CLASP1Q7Z460 1538 aa20.84■□□□□ 0.93
ZNF548-210ENST00000600442 TOP2BQ02880 1626 aa20.83■□□□□ 0.93
ZNF548-210ENST00000600442 SYNJ1O43426 1573 aa20.81■□□□□ 0.92
ZNF548-210ENST00000600442 EEA1Q15075 1411 aa20.81■□□□□ 0.92
ZNF548-210ENST00000600442 CUX1P39880 1505 aa20.81■□□□□ 0.92
ZNF548-210ENST00000600442 MAGI1Q96QZ7 1491 aaPredicted RBP20.81■□□□□ 0.92
ZNF548-210ENST00000600442 GRIN2BQ13224 1484 aa20.78■□□□□ 0.92
ZNF548-210ENST00000600442 BIVM-ERCC5R4GMW8 1640 aa20.78■□□□□ 0.92
ZNF548-210ENST00000600442 FAM9AQ8IZU1 332 aaPredicted RBP20.75■□□□□ 0.91
ZNF548-210ENST00000600442 SYNJ2O15056 1496 aa20.75■□□□□ 0.91
ZNF548-210ENST00000600442 PBRM1Q86U86 1689 aa20.72■□□□□ 0.91
ZNF548-210ENST00000600442 GAPVD1Q14C86 1478 aa20.69■□□□□ 0.9
ZNF548-210ENST00000600442 CSRNP3Q8WYN3 585 aa20.65■□□□□ 0.9
ZNF548-210ENST00000600442 KIF27Q86VH2 1401 aa20.62■□□□□ 0.89
ZNF548-210ENST00000600442 ABCA5Q8WWZ7 1642 aa20.61■□□□□ 0.89
ZNF548-210ENST00000600442 ABCA10Q8WWZ4 1543 aa20.61■□□□□ 0.89
ZNF548-210ENST00000600442 AEBP2Q6ZN18 517 aaPredicted RBP20.59■□□□□ 0.89
ZNF548-210ENST00000600442 LOC105371045A0A1W2PR82 267 aa20.53■□□□□ 0.88
ZNF548-210ENST00000600442 ERCC6L2Q5T890 1561 aa20.53■□□□□ 0.88
ZNF548-210ENST00000600442 GRIN2AQ12879 1464 aa20.51■□□□□ 0.87
ZNF548-210ENST00000600442 RUSC2Q8N2Y8 1516 aa20.47■□□□□ 0.87
ZNF548-210ENST00000600442 CEP170Q5SW79 1584 aa20.46■□□□□ 0.87
ZNF548-210ENST00000600442 ADAMTS12P58397 1594 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms