RNA–Protein interactions for RNA: ENST00000600437.1

DLL3-204, Transcript of delta like canonical Notch ligand 3, humanhuman

TSL 1 (best)

Gene DLL3, Length 1,375 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DLL3-204ENST00000600437 NISCHQ9Y2I1 1504 aa53.26■■■■■ 6.12
DLL3-204ENST00000600437 CCDC180Q9P1Z9 1646 aa47.52■■■■■ 5.2
DLL3-204ENST00000600437 ABCC9O60706 1549 aa46.86■■■■■ 5.09
DLL3-204ENST00000600437 RB1CC1Q8TDY2 1594 aa44.9■■■■■ 4.78
DLL3-204ENST00000600437 NACADO15069 1562 aa44.76■■■■■ 4.76
DLL3-204ENST00000600437 DCAF8L2P0C7V8 631 aa44.73■■■■■ 4.75
DLL3-204ENST00000600437 MYO15BQ96JP2 1530 aa44.34■■■■■ 4.69
DLL3-204ENST00000600437 ZCCHC6Q5VYS8 1495 aaKnown RBP44.27■■■■■ 4.68
DLL3-204ENST00000600437 DCAF1Q9Y4B6 1507 aa44.02■■■■■ 4.64
DLL3-204ENST00000600437 UNC13AQ9UPW8 1703 aa43.99■■■■■ 4.63
DLL3-204ENST00000600437 PABPN1Q86U42 306 aaKnown RBP eCLIP43.75■■■■■ 4.59
DLL3-204ENST00000600437 BICRAQ9NZM4 1560 aa43.58■■■■■ 4.57
DLL3-204ENST00000600437 DNAJC5BQ9UF47 199 aa43.39■■■■■ 4.54
DLL3-204ENST00000600437 SCRIBQ14160 1630 aa43.33■■■■■ 4.53
DLL3-204ENST00000600437 SHROOM4Q9ULL8 1493 aa43■■■■■ 4.47
DLL3-204ENST00000600437 EIF4G1Q04637 1599 aaKnown RBP42.44■■■■■ 4.38
DLL3-204ENST00000600437 CC2D2AQ9P2K1 1620 aa42.39■■■■■ 4.38
DLL3-204ENST00000600437 CECR2Q9BXF3 1484 aa42.13■■■■■ 4.33
DLL3-204ENST00000600437 SMARCA4P51532 1647 aa41.41■■■■■ 4.22
DLL3-204ENST00000600437 NCAPD3P42695 1498 aa41.3■■■■■ 4.2
DLL3-204ENST00000600437 BAZ1AQ9NRL2 1556 aaPredicted RBP41.29■■■■■ 4.2
DLL3-204ENST00000600437 ATAD2BQ9ULI0 1458 aa41.26■■■■■ 4.2
DLL3-204ENST00000600437 SMARCA2P51531 1590 aa41.2■■■■■ 4.19
DLL3-204ENST00000600437 MROH2BQ7Z745 1585 aa41.05■■■■■ 4.16
DLL3-204ENST00000600437 HMGXB3Q12766 1538 aa41.04■■■■■ 4.16
DLL3-204ENST00000600437 PEG3Q9GZU2 1588 aa40.99■■■■■ 4.15
DLL3-204ENST00000600437 BAZ1BQ9UIG0 1483 aaKnown RBP40.9■■■■■ 4.14
DLL3-204ENST00000600437 WIZO95785 1651 aa40.63■■■■■ 4.09
DLL3-204ENST00000600437 RSF1Q96T23 1441 aaPredicted RBP40.51■■■■■ 4.08
DLL3-204ENST00000600437 NESP48681 1621 aa40.45■■■■■ 4.07
DLL3-204ENST00000600437 ERCC6Q03468 1493 aa40.4■■■■■ 4.06
DLL3-204ENST00000600437 LAMC3Q9Y6N6 1575 aa40.28■■■■■ 4.04
DLL3-204ENST00000600437 TOP2AP11388 1531 aaKnown RBP40.11■■■■■ 4.01
DLL3-204ENST00000600437 CUX2O14529 1486 aa40.09■■■■■ 4.01
DLL3-204ENST00000600437 CADPSQ9ULU8 1353 aa40.09■■■■■ 4.01
DLL3-204ENST00000600437 PDS5BQ9NTI5 1447 aa40.01■■■■■ 4
DLL3-204ENST00000600437 KIF21AQ7Z4S6 1674 aa39.99■■■■□ 3.99
DLL3-204ENST00000600437 THOC2Q8NI27 1593 aaKnown RBP39.89■■■■□ 3.98
DLL3-204ENST00000600437 CFTRP13569 1480 aa39.76■■■■□ 3.95
DLL3-204ENST00000600437 CCDC88BA6NC98 1476 aa39.68■■■■□ 3.94
DLL3-204ENST00000600437 FANCD2Q9BXW9 1451 aa39.62■■■■□ 3.93
DLL3-204ENST00000600437 MRC2Q9UBG0 1479 aa39.61■■■■□ 3.93
DLL3-204ENST00000600437 CEP164Q9UPV0 1460 aa39.6■■■■□ 3.93
DLL3-204ENST00000600437 PRDM2Q13029 1718 aa39.51■■■■□ 3.91
DLL3-204ENST00000600437 WDR62O43379 1518 aa39.49■■■■□ 3.91
DLL3-204ENST00000600437 SUPT5HO00267 1087 aaKnown RBP39.48■■■■□ 3.91
DLL3-204ENST00000600437 DNAJC5Q9H3Z4 198 aa39.35■■■■□ 3.89
DLL3-204ENST00000600437 URB2Q14146 1524 aaKnown RBP39.25■■■■□ 3.87
DLL3-204ENST00000600437 TOPBP1Q92547 1522 aa38.95■■■■□ 3.83
DLL3-204ENST00000600437 ABCC8Q09428 1581 aa38.93■■■■□ 3.82
DLL3-204ENST00000600437 DNMBPQ6XZF7 1577 aa38.87■■■■□ 3.81
DLL3-204ENST00000600437 IFT140Q96RY7 1462 aa38.78■■■■□ 3.8
DLL3-204ENST00000600437 ZNF608Q9ULD9 1512 aaPredicted RBP38.65■■■■□ 3.78
DLL3-204ENST00000600437 POLA1P09884 1462 aaPredicted RBP38.59■■■■□ 3.77
DLL3-204ENST00000600437 TARBP1Q13395 1621 aaKnown RBP38.57■■■■□ 3.76
DLL3-204ENST00000600437 CUX1P39880 1505 aa38.52■■■■□ 3.76
DLL3-204ENST00000600437 EIF4G3O43432 1585 aaKnown RBP38.49■■■■□ 3.75
DLL3-204ENST00000600437 FGD5Q6ZNL6 1462 aa38.45■■■■□ 3.75
DLL3-204ENST00000600437 RAD54L2Q9Y4B4 1467 aa38.45■■■■□ 3.75
DLL3-204ENST00000600437 SOGA1O94964 1423 aa38.45■■■■□ 3.75
DLL3-204ENST00000600437 OSCARQ8IYS5 282 aa38.43■■■■□ 3.74
DLL3-204ENST00000600437 AQRO60306 1485 aaKnown RBP eCLIP38.41■■■■□ 3.74
DLL3-204ENST00000600437 TDRD9Q8NDG6 1382 aaKnown RBP38.27■■■■□ 3.72
DLL3-204ENST00000600437 WDR97A6NE52 1622 aa38.21■■■■□ 3.71
DLL3-204ENST00000600437 WRNQ14191 1432 aaPredicted RBP eCLIP38.16■■■■□ 3.7
DLL3-204ENST00000600437 CHD1O14646 1710 aa38.13■■■■□ 3.7
DLL3-204ENST00000600437 BIVM-ERCC5R4GMW8 1640 aa38.11■■■■□ 3.69
DLL3-204ENST00000600437 TOP2BQ02880 1626 aa38.1■■■■□ 3.69
DLL3-204ENST00000600437 SYNJ1O43426 1573 aa38.07■■■■□ 3.69
DLL3-204ENST00000600437 ABCA10Q8WWZ4 1543 aa38.05■■■■□ 3.68
DLL3-204ENST00000600437 FBLN2P98095 1184 aa38.05■■■■□ 3.68
DLL3-204ENST00000600437 GRIN2BQ13224 1484 aa38.02■■■■□ 3.68
DLL3-204ENST00000600437 SNAPC4Q5SXM2 1469 aa38.02■■■■□ 3.68
DLL3-204ENST00000600437 GAPVD1Q14C86 1478 aa37.99■■■■□ 3.67
DLL3-204ENST00000600437 PBRM1Q86U86 1689 aa37.97■■■■□ 3.67
DLL3-204ENST00000600437 MAGI1Q96QZ7 1491 aaPredicted RBP37.94■■■■□ 3.66
DLL3-204ENST00000600437 ABCA5Q8WWZ7 1642 aa37.93■■■■□ 3.66
DLL3-204ENST00000600437 TRIM41Q8WV44 630 aa37.91■■■■□ 3.66
DLL3-204ENST00000600437 CHMP7Q8WUX9 453 aaPredicted RBP37.87■■■■□ 3.65
DLL3-204ENST00000600437 RIMBP3CA6NJZ7 1639 aa37.85■■■■□ 3.65
DLL3-204ENST00000600437 RIMBP3BA6NNM3 1639 aa37.85■■■■□ 3.65
DLL3-204ENST00000600437 RIMBP3Q9UFD9 1639 aa37.85■■■■□ 3.65
DLL3-204ENST00000600437 SYNJ2O15056 1496 aa37.81■■■■□ 3.64
DLL3-204ENST00000600437 ARHGEF11O15085 1522 aa37.76■■■■□ 3.63
DLL3-204ENST00000600437 CLASP1Q7Z460 1538 aa37.64■■■■□ 3.62
DLL3-204ENST00000600437 ADAMTS12P58397 1594 aa37.59■■■■□ 3.61
DLL3-204ENST00000600437 ERICH3Q5RHP9 1530 aa37.58■■■■□ 3.61
DLL3-204ENST00000600437 GRIN2AQ12879 1464 aa37.53■■■■□ 3.6
DLL3-204ENST00000600437 FHAD1B1AJZ9 1412 aa37.52■■■■□ 3.6
DLL3-204ENST00000600437 CYB5RLQ6IPT4 315 aa37.49■■■■□ 3.59
DLL3-204ENST00000600437 ARAP1Q96P48 1450 aa37.42■■■■□ 3.58
DLL3-204ENST00000600437 CEP170Q5SW79 1584 aa37.37■■■■□ 3.57
DLL3-204ENST00000600437 NUP160Q12769 1436 aa37.37■■■■□ 3.57
DLL3-204ENST00000600437 KIF27Q86VH2 1401 aa37.36■■■■□ 3.57
DLL3-204ENST00000600437 IGF1RP08069 1367 aa37.27■■■■□ 3.56
DLL3-204ENST00000600437 CUL7Q14999 1698 aa37.19■■■■□ 3.54
DLL3-204ENST00000600437 SHROOM2Q13796 1616 aa37.16■■■■□ 3.54
DLL3-204ENST00000600437 ERCC6L2Q5T890 1561 aa37.13■■■■□ 3.53
DLL3-204ENST00000600437 CARMIL1Q5VZK9 1371 aa37.05■■■■□ 3.52
DLL3-204ENST00000600437 RUSC2Q8N2Y8 1516 aa37.05■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms