RNA–Protein interactions for RNA: ENST00000600397.1

ZNF552-204, Transcript of zinc finger protein 552, humanhuman

TSL 2

Gene ZNF552, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF552-204ENST00000600397 NISCHQ9Y2I1 1504 aa38.04■■■■□ 3.68
ZNF552-204ENST00000600397 CCDC180Q9P1Z9 1646 aa34.08■■■■□ 3.05
ZNF552-204ENST00000600397 ABCC9O60706 1549 aa33.57■■■□□ 2.96
ZNF552-204ENST00000600397 RB1CC1Q8TDY2 1594 aa32.26■■■□□ 2.75
ZNF552-204ENST00000600397 NACADO15069 1562 aa32.15■■■□□ 2.74
ZNF552-204ENST00000600397 MYO15BQ96JP2 1530 aa31.91■■■□□ 2.7
ZNF552-204ENST00000600397 DCAF8L2P0C7V8 631 aa31.76■■■□□ 2.67
ZNF552-204ENST00000600397 ZCCHC6Q5VYS8 1495 aaKnown RBP31.62■■■□□ 2.65
ZNF552-204ENST00000600397 DCAF1Q9Y4B6 1507 aa31.58■■■□□ 2.65
ZNF552-204ENST00000600397 UNC13AQ9UPW8 1703 aa31.35■■■□□ 2.61
ZNF552-204ENST00000600397 PABPN1Q86U42 306 aaKnown RBP eCLIP31.22■■■□□ 2.59
ZNF552-204ENST00000600397 BICRAQ9NZM4 1560 aa31.2■■■□□ 2.58
ZNF552-204ENST00000600397 DNAJC5BQ9UF47 199 aa31.11■■■□□ 2.57
ZNF552-204ENST00000600397 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
ZNF552-204ENST00000600397 SCRIBQ14160 1630 aa30.89■■■□□ 2.54
ZNF552-204ENST00000600397 EIF4G1Q04637 1599 aaKnown RBP30.45■■■□□ 2.47
ZNF552-204ENST00000600397 CC2D2AQ9P2K1 1620 aa30.4■■■□□ 2.46
ZNF552-204ENST00000600397 CECR2Q9BXF3 1484 aa30.28■■■□□ 2.44
ZNF552-204ENST00000600397 NCAPD3P42695 1498 aa29.65■■■□□ 2.34
ZNF552-204ENST00000600397 SMARCA4P51532 1647 aa29.58■■■□□ 2.33
ZNF552-204ENST00000600397 BAZ1AQ9NRL2 1556 aaPredicted RBP29.56■■■□□ 2.32
ZNF552-204ENST00000600397 SMARCA2P51531 1590 aa29.56■■■□□ 2.32
ZNF552-204ENST00000600397 ATAD2BQ9ULI0 1458 aa29.55■■■□□ 2.32
ZNF552-204ENST00000600397 HMGXB3Q12766 1538 aa29.49■■■□□ 2.31
ZNF552-204ENST00000600397 PEG3Q9GZU2 1588 aa29.4■■■□□ 2.3
ZNF552-204ENST00000600397 BAZ1BQ9UIG0 1483 aaKnown RBP29.29■■■□□ 2.28
ZNF552-204ENST00000600397 MROH2BQ7Z745 1585 aa29.23■■■□□ 2.27
ZNF552-204ENST00000600397 ERCC6Q03468 1493 aa29.04■■■□□ 2.24
ZNF552-204ENST00000600397 CUX2O14529 1486 aa28.98■■■□□ 2.23
ZNF552-204ENST00000600397 LAMC3Q9Y6N6 1575 aa28.94■■■□□ 2.22
ZNF552-204ENST00000600397 NESP48681 1621 aa28.9■■■□□ 2.22
ZNF552-204ENST00000600397 WIZO95785 1651 aa28.86■■■□□ 2.21
ZNF552-204ENST00000600397 RSF1Q96T23 1441 aaPredicted RBP28.78■■■□□ 2.2
ZNF552-204ENST00000600397 PDS5BQ9NTI5 1447 aa28.76■■■□□ 2.19
ZNF552-204ENST00000600397 CADPSQ9ULU8 1353 aa28.73■■■□□ 2.19
ZNF552-204ENST00000600397 TOP2AP11388 1531 aaKnown RBP28.65■■■□□ 2.18
ZNF552-204ENST00000600397 THOC2Q8NI27 1593 aaKnown RBP28.65■■■□□ 2.18
ZNF552-204ENST00000600397 KIF21AQ7Z4S6 1674 aa28.57■■■□□ 2.16
ZNF552-204ENST00000600397 DNAJC5Q9H3Z4 198 aa28.5■■■□□ 2.15
ZNF552-204ENST00000600397 CFTRP13569 1480 aa28.49■■■□□ 2.15
ZNF552-204ENST00000600397 MRC2Q9UBG0 1479 aa28.46■■■□□ 2.15
ZNF552-204ENST00000600397 CEP164Q9UPV0 1460 aa28.4■■■□□ 2.14
ZNF552-204ENST00000600397 WDR62O43379 1518 aa28.38■■■□□ 2.13
ZNF552-204ENST00000600397 FANCD2Q9BXW9 1451 aa28.37■■■□□ 2.13
ZNF552-204ENST00000600397 CCDC88BA6NC98 1476 aa28.25■■■□□ 2.11
ZNF552-204ENST00000600397 PRDM2Q13029 1718 aa28.2■■■□□ 2.1
ZNF552-204ENST00000600397 URB2Q14146 1524 aaKnown RBP28.08■■■□□ 2.09
ZNF552-204ENST00000600397 ABCC8Q09428 1581 aa27.96■■■□□ 2.07
ZNF552-204ENST00000600397 TOPBP1Q92547 1522 aa27.87■■■□□ 2.05
ZNF552-204ENST00000600397 IFT140Q96RY7 1462 aa27.85■■■□□ 2.05
ZNF552-204ENST00000600397 DNMBPQ6XZF7 1577 aa27.83■■■□□ 2.05
ZNF552-204ENST00000600397 ZNF608Q9ULD9 1512 aaPredicted RBP27.64■■■□□ 2.02
ZNF552-204ENST00000600397 OSCARQ8IYS5 282 aa27.62■■■□□ 2.01
ZNF552-204ENST00000600397 POLA1P09884 1462 aaPredicted RBP27.6■■■□□ 2.01
ZNF552-204ENST00000600397 SUPT5HO00267 1087 aaKnown RBP27.59■■■□□ 2.01
ZNF552-204ENST00000600397 TARBP1Q13395 1621 aaKnown RBP27.59■■■□□ 2.01
ZNF552-204ENST00000600397 EIF4G3O43432 1585 aaKnown RBP27.57■■■□□ 2
ZNF552-204ENST00000600397 WDR97A6NE52 1622 aa27.51■■□□□ 1.99
ZNF552-204ENST00000600397 CUX1P39880 1505 aa27.47■■□□□ 1.99
ZNF552-204ENST00000600397 SOGA1O94964 1423 aa27.47■■□□□ 1.99
ZNF552-204ENST00000600397 FGD5Q6ZNL6 1462 aa27.45■■□□□ 1.99
ZNF552-204ENST00000600397 AQRO60306 1485 aaKnown RBP eCLIP27.43■■□□□ 1.98
ZNF552-204ENST00000600397 RAD54L2Q9Y4B4 1467 aa27.4■■□□□ 1.98
ZNF552-204ENST00000600397 TDRD9Q8NDG6 1382 aaKnown RBP27.32■■□□□ 1.96
ZNF552-204ENST00000600397 MAGI1Q96QZ7 1491 aaPredicted RBP27.26■■□□□ 1.95
ZNF552-204ENST00000600397 GRIN2BQ13224 1484 aa27.25■■□□□ 1.95
ZNF552-204ENST00000600397 ABCA10Q8WWZ4 1543 aa27.24■■□□□ 1.95
ZNF552-204ENST00000600397 CHD1O14646 1710 aa27.24■■□□□ 1.95
ZNF552-204ENST00000600397 TRIM41Q8WV44 630 aa27.23■■□□□ 1.95
ZNF552-204ENST00000600397 SNAPC4Q5SXM2 1469 aa27.21■■□□□ 1.95
ZNF552-204ENST00000600397 WRNQ14191 1432 aaPredicted RBP eCLIP27.19■■□□□ 1.94
ZNF552-204ENST00000600397 RIMBP3CA6NJZ7 1639 aa27.18■■□□□ 1.94
ZNF552-204ENST00000600397 RIMBP3BA6NNM3 1639 aa27.18■■□□□ 1.94
ZNF552-204ENST00000600397 TOP2BQ02880 1626 aa27.18■■□□□ 1.94
ZNF552-204ENST00000600397 RIMBP3Q9UFD9 1639 aa27.18■■□□□ 1.94
ZNF552-204ENST00000600397 ARHGEF11O15085 1522 aa27.17■■□□□ 1.94
ZNF552-204ENST00000600397 BIVM-ERCC5R4GMW8 1640 aa27.17■■□□□ 1.94
ZNF552-204ENST00000600397 GAPVD1Q14C86 1478 aa27.16■■□□□ 1.94
ZNF552-204ENST00000600397 FBLN2P98095 1184 aa27.15■■□□□ 1.94
ZNF552-204ENST00000600397 SYNJ2O15056 1496 aa27.13■■□□□ 1.93
ZNF552-204ENST00000600397 ABCA5Q8WWZ7 1642 aa27.13■■□□□ 1.93
ZNF552-204ENST00000600397 PBRM1Q86U86 1689 aa27.09■■□□□ 1.93
ZNF552-204ENST00000600397 CHMP7Q8WUX9 453 aaPredicted RBP27.09■■□□□ 1.93
ZNF552-204ENST00000600397 SYNJ1O43426 1573 aa27.08■■□□□ 1.93
ZNF552-204ENST00000600397 CLASP1Q7Z460 1538 aa27.03■■□□□ 1.92
ZNF552-204ENST00000600397 ERICH3Q5RHP9 1530 aa26.93■■□□□ 1.9
ZNF552-204ENST00000600397 ARAP1Q96P48 1450 aa26.91■■□□□ 1.9
ZNF552-204ENST00000600397 ADAMTS12P58397 1594 aa26.9■■□□□ 1.9
ZNF552-204ENST00000600397 GRIN2AQ12879 1464 aa26.88■■□□□ 1.89
ZNF552-204ENST00000600397 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
ZNF552-204ENST00000600397 CYB5RLQ6IPT4 315 aa26.86■■□□□ 1.89
ZNF552-204ENST00000600397 NUP160Q12769 1436 aa26.81■■□□□ 1.88
ZNF552-204ENST00000600397 CEP170Q5SW79 1584 aa26.71■■□□□ 1.87
ZNF552-204ENST00000600397 KIF27Q86VH2 1401 aa26.67■■□□□ 1.86
ZNF552-204ENST00000600397 SHROOM2Q13796 1616 aa26.64■■□□□ 1.85
ZNF552-204ENST00000600397 CUL7Q14999 1698 aa26.59■■□□□ 1.85
ZNF552-204ENST00000600397 IGF1RP08069 1367 aa26.57■■□□□ 1.84
ZNF552-204ENST00000600397 RUSC2Q8N2Y8 1516 aa26.52■■□□□ 1.84
ZNF552-204ENST00000600397 ERCC6L2Q5T890 1561 aa26.5■■□□□ 1.83
ZNF552-204ENST00000600397 JPH4Q96JJ6 628 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms