RNA–Protein interactions for RNA: ENST00000600396.1

VAV1-208, Transcript of vav guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene VAV1, Length 689 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAV1-208ENST00000600396 NISCHQ9Y2I1 1504 aa37.3■■■■□ 3.56
VAV1-208ENST00000600396 ABCC9O60706 1549 aa34.46■■■■□ 3.11
VAV1-208ENST00000600396 CCDC180Q9P1Z9 1646 aa33.68■■■□□ 2.98
VAV1-208ENST00000600396 DNAJC5BQ9UF47 199 aa32.93■■■□□ 2.86
VAV1-208ENST00000600396 RB1CC1Q8TDY2 1594 aa32.48■■■□□ 2.79
VAV1-208ENST00000600396 NACADO15069 1562 aa32.07■■■□□ 2.72
VAV1-208ENST00000600396 PABPN1Q86U42 306 aaKnown RBP eCLIP32.07■■■□□ 2.72
VAV1-208ENST00000600396 DCAF8L2P0C7V8 631 aa32.05■■■□□ 2.72
VAV1-208ENST00000600396 UNC13AQ9UPW8 1703 aa31.61■■■□□ 2.65
VAV1-208ENST00000600396 BICRAQ9NZM4 1560 aa31.46■■■□□ 2.63
VAV1-208ENST00000600396 MYO15BQ96JP2 1530 aa31.37■■■□□ 2.61
VAV1-208ENST00000600396 CECR2Q9BXF3 1484 aa31.12■■■□□ 2.57
VAV1-208ENST00000600396 CC2D2AQ9P2K1 1620 aa31.04■■■□□ 2.56
VAV1-208ENST00000600396 SHROOM4Q9ULL8 1493 aa31.01■■■□□ 2.55
VAV1-208ENST00000600396 EIF4G1Q04637 1599 aaKnown RBP30.8■■■□□ 2.52
VAV1-208ENST00000600396 DNAJC5Q9H3Z4 198 aa30.78■■■□□ 2.52
VAV1-208ENST00000600396 ZCCHC6Q5VYS8 1495 aaKnown RBP30.72■■■□□ 2.51
VAV1-208ENST00000600396 SCRIBQ14160 1630 aa30.72■■■□□ 2.51
VAV1-208ENST00000600396 DCAF1Q9Y4B6 1507 aa30.72■■■□□ 2.51
VAV1-208ENST00000600396 CUX2O14529 1486 aa29.95■■■□□ 2.39
VAV1-208ENST00000600396 ERCC6Q03468 1493 aa29.87■■■□□ 2.37
VAV1-208ENST00000600396 NCAPD3P42695 1498 aa29.64■■■□□ 2.34
VAV1-208ENST00000600396 ATAD2BQ9ULI0 1458 aa29.45■■■□□ 2.31
VAV1-208ENST00000600396 NESP48681 1621 aa29.38■■■□□ 2.29
VAV1-208ENST00000600396 SMARCA2P51531 1590 aa29.33■■■□□ 2.29
VAV1-208ENST00000600396 HMGXB3Q12766 1538 aa29.3■■■□□ 2.28
VAV1-208ENST00000600396 TRIM41Q8WV44 630 aa29.25■■■□□ 2.27
VAV1-208ENST00000600396 SMARCA4P51532 1647 aa29.2■■■□□ 2.27
VAV1-208ENST00000600396 BAZ1BQ9UIG0 1483 aaKnown RBP29.16■■■□□ 2.26
VAV1-208ENST00000600396 THOC2Q8NI27 1593 aaKnown RBP29.13■■■□□ 2.25
VAV1-208ENST00000600396 LAMC3Q9Y6N6 1575 aa29.05■■■□□ 2.24
VAV1-208ENST00000600396 PDS5BQ9NTI5 1447 aa29.01■■■□□ 2.23
VAV1-208ENST00000600396 BAZ1AQ9NRL2 1556 aaPredicted RBP29.01■■■□□ 2.23
VAV1-208ENST00000600396 KIF21AQ7Z4S6 1674 aa28.91■■■□□ 2.22
VAV1-208ENST00000600396 PEG3Q9GZU2 1588 aa28.88■■■□□ 2.21
VAV1-208ENST00000600396 CADPSQ9ULU8 1353 aa28.75■■■□□ 2.19
VAV1-208ENST00000600396 MRC2Q9UBG0 1479 aa28.72■■■□□ 2.19
VAV1-208ENST00000600396 MROH2BQ7Z745 1585 aa28.72■■■□□ 2.19
VAV1-208ENST00000600396 OSCARQ8IYS5 282 aa28.62■■■□□ 2.17
VAV1-208ENST00000600396 WDR62O43379 1518 aa28.62■■■□□ 2.17
VAV1-208ENST00000600396 CEP164Q9UPV0 1460 aa28.5■■■□□ 2.15
VAV1-208ENST00000600396 FANCD2Q9BXW9 1451 aa28.4■■■□□ 2.14
VAV1-208ENST00000600396 WIZO95785 1651 aa28.33■■■□□ 2.13
VAV1-208ENST00000600396 CFTRP13569 1480 aa28.23■■■□□ 2.11
VAV1-208ENST00000600396 URB2Q14146 1524 aaKnown RBP28.16■■■□□ 2.1
VAV1-208ENST00000600396 RIMBP3CA6NJZ7 1639 aa28.14■■■□□ 2.1
VAV1-208ENST00000600396 RIMBP3BA6NNM3 1639 aa28.14■■■□□ 2.1
VAV1-208ENST00000600396 RIMBP3Q9UFD9 1639 aa28.14■■■□□ 2.1
VAV1-208ENST00000600396 CYB5RLQ6IPT4 315 aa28.01■■■□□ 2.07
VAV1-208ENST00000600396 ARHGEF11O15085 1522 aa28.01■■■□□ 2.07
VAV1-208ENST00000600396 TRHP20396 242 aaPredicted RBP27.97■■■□□ 2.07
VAV1-208ENST00000600396 IFT140Q96RY7 1462 aa27.95■■■□□ 2.07
VAV1-208ENST00000600396 ZNF608Q9ULD9 1512 aaPredicted RBP27.95■■■□□ 2.06
VAV1-208ENST00000600396 TOP2AP11388 1531 aaKnown RBP27.93■■■□□ 2.06
VAV1-208ENST00000600396 RSF1Q96T23 1441 aaPredicted RBP27.92■■■□□ 2.06
VAV1-208ENST00000600396 PRDM2Q13029 1718 aa27.78■■■□□ 2.04
VAV1-208ENST00000600396 TOPBP1Q92547 1522 aa27.77■■■□□ 2.04
VAV1-208ENST00000600396 FBLN2P98095 1184 aa27.76■■■□□ 2.03
VAV1-208ENST00000600396 ABCC8Q09428 1581 aa27.72■■■□□ 2.03
VAV1-208ENST00000600396 EIF4G3O43432 1585 aaKnown RBP27.71■■■□□ 2.03
VAV1-208ENST00000600396 AEBP2Q6ZN18 517 aaPredicted RBP27.68■■■□□ 2.02
VAV1-208ENST00000600396 ARAP1Q96P48 1450 aa27.68■■■□□ 2.02
VAV1-208ENST00000600396 CCDC88BA6NC98 1476 aa27.67■■■□□ 2.02
VAV1-208ENST00000600396 AQRO60306 1485 aaKnown RBP eCLIP27.67■■■□□ 2.02
VAV1-208ENST00000600396 CHD1O14646 1710 aa27.62■■■□□ 2.01
VAV1-208ENST00000600396 DNMBPQ6XZF7 1577 aa27.58■■■□□ 2.01
VAV1-208ENST00000600396 TARBP1Q13395 1621 aaKnown RBP27.51■■□□□ 1.99
VAV1-208ENST00000600396 POLA1P09884 1462 aaPredicted RBP27.44■■□□□ 1.98
VAV1-208ENST00000600396 CHMP7Q8WUX9 453 aaPredicted RBP27.42■■□□□ 1.98
VAV1-208ENST00000600396 TDRD9Q8NDG6 1382 aaKnown RBP27.42■■□□□ 1.98
VAV1-208ENST00000600396 SOGA1O94964 1423 aa27.39■■□□□ 1.97
VAV1-208ENST00000600396 RAD54L2Q9Y4B4 1467 aa27.38■■□□□ 1.97
VAV1-208ENST00000600396 SNAPC4Q5SXM2 1469 aa27.33■■□□□ 1.97
VAV1-208ENST00000600396 CLASP1Q7Z460 1538 aa27.29■■□□□ 1.96
VAV1-208ENST00000600396 SYNJ1O43426 1573 aa27.29■■□□□ 1.96
VAV1-208ENST00000600396 MAGI1Q96QZ7 1491 aaPredicted RBP27.22■■□□□ 1.95
VAV1-208ENST00000600396 WDR97A6NE52 1622 aa27.19■■□□□ 1.94
VAV1-208ENST00000600396 GRIN2BQ13224 1484 aa27.19■■□□□ 1.94
VAV1-208ENST00000600396 FGD5Q6ZNL6 1462 aa27.18■■□□□ 1.94
VAV1-208ENST00000600396 SYNJ2O15056 1496 aa27.15■■□□□ 1.94
VAV1-208ENST00000600396 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.94
VAV1-208ENST00000600396 CUX1P39880 1505 aa27.01■■□□□ 1.91
VAV1-208ENST00000600396 PBRM1Q86U86 1689 aa26.92■■□□□ 1.9
VAV1-208ENST00000600396 ERCC6L2Q5T890 1561 aa26.84■■□□□ 1.89
VAV1-208ENST00000600396 ABCA10Q8WWZ4 1543 aa26.82■■□□□ 1.88
VAV1-208ENST00000600396 GRIN2AQ12879 1464 aa26.81■■□□□ 1.88
VAV1-208ENST00000600396 ABCA5Q8WWZ7 1642 aa26.78■■□□□ 1.88
VAV1-208ENST00000600396 CEP170Q5SW79 1584 aa26.76■■□□□ 1.87
VAV1-208ENST00000600396 NUP160Q12769 1436 aa26.72■■□□□ 1.87
VAV1-208ENST00000600396 WRNQ14191 1432 aaPredicted RBP eCLIP26.66■■□□□ 1.86
VAV1-208ENST00000600396 ADAMTS12P58397 1594 aa26.64■■□□□ 1.86
VAV1-208ENST00000600396 NPM1P06748 294 aaKnown RBP eCLIP26.64■■□□□ 1.86
VAV1-208ENST00000600396 FAM69CQ0P6D2 419 aa26.64■■□□□ 1.86
VAV1-208ENST00000600396 FHAD1B1AJZ9 1412 aa26.64■■□□□ 1.85
VAV1-208ENST00000600396 KIF13AQ9H1H9 1805 aa26.62■■□□□ 1.85
VAV1-208ENST00000600396 SHROOM2Q13796 1616 aa26.61■■□□□ 1.85
VAV1-208ENST00000600396 PRG4Q92954 1404 aaPredicted RBP26.59■■□□□ 1.85
VAV1-208ENST00000600396 JPH4Q96JJ6 628 aa26.59■■□□□ 1.85
VAV1-208ENST00000600396 ABCC10Q5T3U5 1492 aa26.5■■□□□ 1.83
VAV1-208ENST00000600396 KDM4FA0A1W2PPD8 638 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms