RNA–Protein interactions for RNA: ENST00000600393.1

FCHO1-233, Transcript of FCH domain only 1, humanhuman

TSL 4

Gene FCHO1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FCHO1-233ENST00000600393 NISCHQ9Y2I1 1504 aa32.3■■■□□ 2.76
FCHO1-233ENST00000600393 CCDC180Q9P1Z9 1646 aa28.91■■■□□ 2.22
FCHO1-233ENST00000600393 ABCC9O60706 1549 aa28.91■■■□□ 2.22
FCHO1-233ENST00000600393 RB1CC1Q8TDY2 1594 aa27.47■■□□□ 1.99
FCHO1-233ENST00000600393 DNAJC5BQ9UF47 199 aa27.29■■□□□ 1.96
FCHO1-233ENST00000600393 NACADO15069 1562 aa27.28■■□□□ 1.96
FCHO1-233ENST00000600393 DCAF8L2P0C7V8 631 aa27.23■■□□□ 1.95
FCHO1-233ENST00000600393 UNC13AQ9UPW8 1703 aa26.95■■□□□ 1.9
FCHO1-233ENST00000600393 PABPN1Q86U42 306 aaKnown RBP eCLIP26.93■■□□□ 1.9
FCHO1-233ENST00000600393 MYO15BQ96JP2 1530 aa26.89■■□□□ 1.89
FCHO1-233ENST00000600393 ZCCHC6Q5VYS8 1495 aaKnown RBP26.81■■□□□ 1.88
FCHO1-233ENST00000600393 BICRAQ9NZM4 1560 aa26.75■■□□□ 1.87
FCHO1-233ENST00000600393 DCAF1Q9Y4B6 1507 aa26.61■■□□□ 1.85
FCHO1-233ENST00000600393 SCRIBQ14160 1630 aa26.47■■□□□ 1.83
FCHO1-233ENST00000600393 SHROOM4Q9ULL8 1493 aa26.24■■□□□ 1.79
FCHO1-233ENST00000600393 CC2D2AQ9P2K1 1620 aa26.1■■□□□ 1.77
FCHO1-233ENST00000600393 EIF4G1Q04637 1599 aaKnown RBP26.05■■□□□ 1.76
FCHO1-233ENST00000600393 CECR2Q9BXF3 1484 aa25.98■■□□□ 1.75
FCHO1-233ENST00000600393 DNAJC5Q9H3Z4 198 aa25.44■■□□□ 1.66
FCHO1-233ENST00000600393 SMARCA4P51532 1647 aa25.21■■□□□ 1.63
FCHO1-233ENST00000600393 NCAPD3P42695 1498 aa25.19■■□□□ 1.62
FCHO1-233ENST00000600393 ATAD2BQ9ULI0 1458 aa25.18■■□□□ 1.62
FCHO1-233ENST00000600393 SMARCA2P51531 1590 aa25.08■■□□□ 1.61
FCHO1-233ENST00000600393 HMGXB3Q12766 1538 aa25.04■■□□□ 1.6
FCHO1-233ENST00000600393 BAZ1AQ9NRL2 1556 aaPredicted RBP25.04■■□□□ 1.6
FCHO1-233ENST00000600393 MROH2BQ7Z745 1585 aa24.95■■□□□ 1.58
FCHO1-233ENST00000600393 BAZ1BQ9UIG0 1483 aaKnown RBP24.95■■□□□ 1.58
FCHO1-233ENST00000600393 ERCC6Q03468 1493 aa24.9■■□□□ 1.58
FCHO1-233ENST00000600393 PEG3Q9GZU2 1588 aa24.9■■□□□ 1.58
FCHO1-233ENST00000600393 NESP48681 1621 aa24.89■■□□□ 1.57
FCHO1-233ENST00000600393 CUX2O14529 1486 aa24.78■■□□□ 1.56
FCHO1-233ENST00000600393 WIZO95785 1651 aa24.66■■□□□ 1.54
FCHO1-233ENST00000600393 LAMC3Q9Y6N6 1575 aa24.61■■□□□ 1.53
FCHO1-233ENST00000600393 THOC2Q8NI27 1593 aaKnown RBP24.59■■□□□ 1.53
FCHO1-233ENST00000600393 KIF21AQ7Z4S6 1674 aa24.56■■□□□ 1.52
FCHO1-233ENST00000600393 PDS5BQ9NTI5 1447 aa24.44■■□□□ 1.5
FCHO1-233ENST00000600393 CADPSQ9ULU8 1353 aa24.43■■□□□ 1.5
FCHO1-233ENST00000600393 RSF1Q96T23 1441 aaPredicted RBP24.43■■□□□ 1.5
FCHO1-233ENST00000600393 TOP2AP11388 1531 aaKnown RBP24.31■■□□□ 1.48
FCHO1-233ENST00000600393 MRC2Q9UBG0 1479 aa24.29■■□□□ 1.48
FCHO1-233ENST00000600393 WDR62O43379 1518 aa24.23■■□□□ 1.47
FCHO1-233ENST00000600393 CEP164Q9UPV0 1460 aa24.22■■□□□ 1.47
FCHO1-233ENST00000600393 FANCD2Q9BXW9 1451 aa24.21■■□□□ 1.47
FCHO1-233ENST00000600393 CFTRP13569 1480 aa24.19■■□□□ 1.46
FCHO1-233ENST00000600393 TRIM41Q8WV44 630 aa24.13■■□□□ 1.45
FCHO1-233ENST00000600393 URB2Q14146 1524 aaKnown RBP24.05■■□□□ 1.44
FCHO1-233ENST00000600393 CCDC88BA6NC98 1476 aa24.04■■□□□ 1.44
FCHO1-233ENST00000600393 PRDM2Q13029 1718 aa24■■□□□ 1.43
FCHO1-233ENST00000600393 TOPBP1Q92547 1522 aa23.78■■□□□ 1.4
FCHO1-233ENST00000600393 ZNF608Q9ULD9 1512 aaPredicted RBP23.74■■□□□ 1.39
FCHO1-233ENST00000600393 IFT140Q96RY7 1462 aa23.69■■□□□ 1.38
FCHO1-233ENST00000600393 DNMBPQ6XZF7 1577 aa23.68■■□□□ 1.38
FCHO1-233ENST00000600393 OSCARQ8IYS5 282 aa23.62■■□□□ 1.37
FCHO1-233ENST00000600393 EIF4G3O43432 1585 aaKnown RBP23.61■■□□□ 1.37
FCHO1-233ENST00000600393 ABCC8Q09428 1581 aa23.6■■□□□ 1.37
FCHO1-233ENST00000600393 TARBP1Q13395 1621 aaKnown RBP23.56■■□□□ 1.36
FCHO1-233ENST00000600393 POLA1P09884 1462 aaPredicted RBP23.55■■□□□ 1.36
FCHO1-233ENST00000600393 AQRO60306 1485 aaKnown RBP eCLIP23.52■■□□□ 1.363e-6■■■□□ 17
FCHO1-233ENST00000600393 RAD54L2Q9Y4B4 1467 aa23.49■■□□□ 1.35
FCHO1-233ENST00000600393 SUPT5HO00267 1087 aaKnown RBP23.46■■□□□ 1.35
FCHO1-233ENST00000600393 CUX1P39880 1505 aa23.43■■□□□ 1.34
FCHO1-233ENST00000600393 CHD1O14646 1710 aa23.42■■□□□ 1.34
FCHO1-233ENST00000600393 RIMBP3CA6NJZ7 1639 aa23.42■■□□□ 1.34
FCHO1-233ENST00000600393 RIMBP3BA6NNM3 1639 aa23.42■■□□□ 1.34
FCHO1-233ENST00000600393 RIMBP3Q9UFD9 1639 aa23.42■■□□□ 1.34
FCHO1-233ENST00000600393 FGD5Q6ZNL6 1462 aa23.42■■□□□ 1.34
FCHO1-233ENST00000600393 SOGA1O94964 1423 aa23.39■■□□□ 1.33
FCHO1-233ENST00000600393 TDRD9Q8NDG6 1382 aaKnown RBP23.38■■□□□ 1.33
FCHO1-233ENST00000600393 ARHGEF11O15085 1522 aa23.35■■□□□ 1.33
FCHO1-233ENST00000600393 FBLN2P98095 1184 aa23.31■■□□□ 1.32
FCHO1-233ENST00000600393 SNAPC4Q5SXM2 1469 aa23.29■■□□□ 1.32
FCHO1-233ENST00000600393 WDR97A6NE52 1622 aa23.26■■□□□ 1.31
FCHO1-233ENST00000600393 GRIN2BQ13224 1484 aa23.17■■□□□ 1.3
FCHO1-233ENST00000600393 PBRM1Q86U86 1689 aa23.16■■□□□ 1.3
FCHO1-233ENST00000600393 MAGI1Q96QZ7 1491 aaPredicted RBP23.16■■□□□ 1.3
FCHO1-233ENST00000600393 ARAP1Q96P48 1450 aa23.15■■□□□ 1.3
FCHO1-233ENST00000600393 CYB5RLQ6IPT4 315 aa23.13■■□□□ 1.29
FCHO1-233ENST00000600393 CLASP1Q7Z460 1538 aa23.13■■□□□ 1.29
FCHO1-233ENST00000600393 GAPVD1Q14C86 1478 aa23.12■■□□□ 1.29
FCHO1-233ENST00000600393 ABCA10Q8WWZ4 1543 aa23.12■■□□□ 1.29
FCHO1-233ENST00000600393 ABCA5Q8WWZ7 1642 aa23.11■■□□□ 1.29
FCHO1-233ENST00000600393 CHMP7Q8WUX9 453 aaPredicted RBP23.1■■□□□ 1.29
FCHO1-233ENST00000600393 SYNJ2O15056 1496 aa23.09■■□□□ 1.29
FCHO1-233ENST00000600393 SYNJ1O43426 1573 aa23.09■■□□□ 1.29
FCHO1-233ENST00000600393 BIVM-ERCC5R4GMW8 1640 aa23.05■■□□□ 1.28
FCHO1-233ENST00000600393 TOP2BQ02880 1626 aa23.04■■□□□ 1.28
FCHO1-233ENST00000600393 WRNQ14191 1432 aaPredicted RBP eCLIP23.03■■□□□ 1.28
FCHO1-233ENST00000600393 TRHP20396 242 aaPredicted RBP22.97■■□□□ 1.27
FCHO1-233ENST00000600393 ADAMTS12P58397 1594 aa22.95■■□□□ 1.26
FCHO1-233ENST00000600393 GRIN2AQ12879 1464 aa22.92■■□□□ 1.26
FCHO1-233ENST00000600393 CEP170Q5SW79 1584 aa22.87■■□□□ 1.25
FCHO1-233ENST00000600393 ERCC6L2Q5T890 1561 aa22.84■■□□□ 1.25
FCHO1-233ENST00000600393 NUP160Q12769 1436 aa22.82■■□□□ 1.24
FCHO1-233ENST00000600393 ERICH3Q5RHP9 1530 aa22.81■■□□□ 1.24
FCHO1-233ENST00000600393 FHAD1B1AJZ9 1412 aa22.81■■□□□ 1.24
FCHO1-233ENST00000600393 AEBP2Q6ZN18 517 aaPredicted RBP22.73■■□□□ 1.23
FCHO1-233ENST00000600393 SHROOM2Q13796 1616 aa22.71■■□□□ 1.23
FCHO1-233ENST00000600393 RUSC2Q8N2Y8 1516 aa22.62■■□□□ 1.21
FCHO1-233ENST00000600393 PRG4Q92954 1404 aaPredicted RBP22.6■■□□□ 1.21
FCHO1-233ENST00000600393 IGF1RP08069 1367 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms