RNA–Protein interactions for RNA: ENST00000600352.1

NPAS1-205, Transcript of neuronal PAS domain protein 1, humanhuman

TSL 3

Gene NPAS1, Length 764 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1-205ENST00000600352 NISCHQ9Y2I1 1504 aa43.4■■■■■ 4.54
NPAS1-205ENST00000600352 CCDC180Q9P1Z9 1646 aa38.64■■■■□ 3.78
NPAS1-205ENST00000600352 ABCC9O60706 1549 aa37.77■■■■□ 3.64
NPAS1-205ENST00000600352 RB1CC1Q8TDY2 1594 aa36.32■■■■□ 3.41
NPAS1-205ENST00000600352 NACADO15069 1562 aa36.27■■■■□ 3.4
NPAS1-205ENST00000600352 ZCCHC6Q5VYS8 1495 aaKnown RBP36.18■■■■□ 3.38
NPAS1-205ENST00000600352 DCAF8L2P0C7V8 631 aa36.1■■■■□ 3.37
NPAS1-205ENST00000600352 MYO15BQ96JP2 1530 aa36.08■■■■□ 3.37
NPAS1-205ENST00000600352 DCAF1Q9Y4B6 1507 aa35.92■■■■□ 3.34
NPAS1-205ENST00000600352 UNC13AQ9UPW8 1703 aa35.63■■■■□ 3.29
NPAS1-205ENST00000600352 BICRAQ9NZM4 1560 aa35.33■■■■□ 3.25
NPAS1-205ENST00000600352 PABPN1Q86U42 306 aaKnown RBP eCLIP35.25■■■■□ 3.23
NPAS1-205ENST00000600352 SCRIBQ14160 1630 aa35.24■■■■□ 3.23
NPAS1-205ENST00000600352 SHROOM4Q9ULL8 1493 aa34.86■■■■□ 3.17
NPAS1-205ENST00000600352 DNAJC5BQ9UF47 199 aa34.74■■■■□ 3.15
NPAS1-205ENST00000600352 EIF4G1Q04637 1599 aaKnown RBP34.34■■■■□ 3.09
NPAS1-205ENST00000600352 CC2D2AQ9P2K1 1620 aa34.2■■■■□ 3.07
NPAS1-205ENST00000600352 CECR2Q9BXF3 1484 aa33.94■■■■□ 3.02
NPAS1-205ENST00000600352 SMARCA4P51532 1647 aa33.71■■■□□ 2.99
NPAS1-205ENST00000600352 BAZ1AQ9NRL2 1556 aaPredicted RBP33.62■■■□□ 2.97
NPAS1-205ENST00000600352 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
NPAS1-205ENST00000600352 NCAPD3P42695 1498 aa33.48■■■□□ 2.95
NPAS1-205ENST00000600352 MROH2BQ7Z745 1585 aa33.47■■■□□ 2.95
NPAS1-205ENST00000600352 SMARCA2P51531 1590 aa33.44■■■□□ 2.94
NPAS1-205ENST00000600352 PEG3Q9GZU2 1588 aa33.39■■■□□ 2.94
NPAS1-205ENST00000600352 HMGXB3Q12766 1538 aa33.34■■■□□ 2.93
NPAS1-205ENST00000600352 BAZ1BQ9UIG0 1483 aaKnown RBP33.19■■■□□ 2.9
NPAS1-205ENST00000600352 WIZO95785 1651 aa33.13■■■□□ 2.89
NPAS1-205ENST00000600352 RSF1Q96T23 1441 aaPredicted RBP33.04■■■□□ 2.88
NPAS1-205ENST00000600352 TOP2AP11388 1531 aaKnown RBP32.75■■■□□ 2.83
NPAS1-205ENST00000600352 NESP48681 1621 aa32.73■■■□□ 2.83
NPAS1-205ENST00000600352 LAMC3Q9Y6N6 1575 aa32.61■■■□□ 2.81
NPAS1-205ENST00000600352 ERCC6Q03468 1493 aa32.5■■■□□ 2.79
NPAS1-205ENST00000600352 CADPSQ9ULU8 1353 aa32.47■■■□□ 2.79
NPAS1-205ENST00000600352 KIF21AQ7Z4S6 1674 aa32.37■■■□□ 2.77
NPAS1-205ENST00000600352 CCDC88BA6NC98 1476 aa32.35■■■□□ 2.77
NPAS1-205ENST00000600352 PDS5BQ9NTI5 1447 aa32.32■■■□□ 2.76
NPAS1-205ENST00000600352 CFTRP13569 1480 aa32.31■■■□□ 2.76
NPAS1-205ENST00000600352 THOC2Q8NI27 1593 aaKnown RBP32.28■■■□□ 2.76
NPAS1-205ENST00000600352 CUX2O14529 1486 aa32.23■■■□□ 2.75
NPAS1-205ENST00000600352 PRDM2Q13029 1718 aa32.14■■■□□ 2.74
NPAS1-205ENST00000600352 FANCD2Q9BXW9 1451 aa32.11■■■□□ 2.73
NPAS1-205ENST00000600352 SUPT5HO00267 1087 aaKnown RBP32.07■■■□□ 2.72
NPAS1-205ENST00000600352 CEP164Q9UPV0 1460 aa32.07■■■□□ 2.72
NPAS1-205ENST00000600352 MRC2Q9UBG0 1479 aa32.04■■■□□ 2.72
NPAS1-205ENST00000600352 WDR62O43379 1518 aa31.98■■■□□ 2.71
NPAS1-205ENST00000600352 URB2Q14146 1524 aaKnown RBP31.85■■■□□ 2.69
NPAS1-205ENST00000600352 TOPBP1Q92547 1522 aa31.63■■■□□ 2.65
NPAS1-205ENST00000600352 DNMBPQ6XZF7 1577 aa31.6■■■□□ 2.65
NPAS1-205ENST00000600352 ABCC8Q09428 1581 aa31.55■■■□□ 2.64
NPAS1-205ENST00000600352 IFT140Q96RY7 1462 aa31.4■■■□□ 2.62
NPAS1-205ENST00000600352 CUX1P39880 1505 aa31.4■■■□□ 2.62
NPAS1-205ENST00000600352 POLA1P09884 1462 aaPredicted RBP31.36■■■□□ 2.61
NPAS1-205ENST00000600352 TARBP1Q13395 1621 aaKnown RBP31.33■■■□□ 2.61
NPAS1-205ENST00000600352 ZNF608Q9ULD9 1512 aaPredicted RBP31.31■■■□□ 2.6
NPAS1-205ENST00000600352 FGD5Q6ZNL6 1462 aa31.27■■■□□ 2.6
NPAS1-205ENST00000600352 DNAJC5Q9H3Z4 198 aa31.23■■■□□ 2.59
NPAS1-205ENST00000600352 RAD54L2Q9Y4B4 1467 aa31.22■■■□□ 2.59
NPAS1-205ENST00000600352 EIF4G3O43432 1585 aaKnown RBP31.21■■■□□ 2.59
NPAS1-205ENST00000600352 SOGA1O94964 1423 aa31.17■■■□□ 2.58
NPAS1-205ENST00000600352 BIVM-ERCC5R4GMW8 1640 aa31.14■■■□□ 2.58
NPAS1-205ENST00000600352 SYNJ1O43426 1573 aa31.13■■■□□ 2.57
NPAS1-205ENST00000600352 WRNQ14191 1432 aaPredicted RBP eCLIP31.12■■■□□ 2.57
NPAS1-205ENST00000600352 TOP2BQ02880 1626 aa31.12■■■□□ 2.57
NPAS1-205ENST00000600352 WDR97A6NE52 1622 aa31.11■■■□□ 2.57
NPAS1-205ENST00000600352 AQRO60306 1485 aaKnown RBP eCLIP31.09■■■□□ 2.57
NPAS1-205ENST00000600352 TDRD9Q8NDG6 1382 aaKnown RBP31.01■■■□□ 2.55
NPAS1-205ENST00000600352 ABCA10Q8WWZ4 1543 aa30.97■■■□□ 2.55
NPAS1-205ENST00000600352 ABCA5Q8WWZ7 1642 aa30.9■■■□□ 2.54
NPAS1-205ENST00000600352 PBRM1Q86U86 1689 aa30.85■■■□□ 2.53
NPAS1-205ENST00000600352 CHD1O14646 1710 aa30.84■■■□□ 2.53
NPAS1-205ENST00000600352 GRIN2BQ13224 1484 aa30.83■■■□□ 2.53
NPAS1-205ENST00000600352 GAPVD1Q14C86 1478 aa30.83■■■□□ 2.53
NPAS1-205ENST00000600352 SNAPC4Q5SXM2 1469 aa30.82■■■□□ 2.53
NPAS1-205ENST00000600352 OSCARQ8IYS5 282 aa30.79■■■□□ 2.52
NPAS1-205ENST00000600352 MAGI1Q96QZ7 1491 aaPredicted RBP30.76■■■□□ 2.52
NPAS1-205ENST00000600352 SYNJ2O15056 1496 aa30.63■■■□□ 2.49
NPAS1-205ENST00000600352 FBLN2P98095 1184 aa30.62■■■□□ 2.49
NPAS1-205ENST00000600352 ADAMTS12P58397 1594 aa30.59■■■□□ 2.49
NPAS1-205ENST00000600352 ERICH3Q5RHP9 1530 aa30.58■■■□□ 2.49
NPAS1-205ENST00000600352 CHMP7Q8WUX9 453 aaPredicted RBP30.54■■■□□ 2.48
NPAS1-205ENST00000600352 CLASP1Q7Z460 1538 aa30.5■■■□□ 2.47
NPAS1-205ENST00000600352 FHAD1B1AJZ9 1412 aa30.47■■■□□ 2.47
NPAS1-205ENST00000600352 GRIN2AQ12879 1464 aa30.45■■■□□ 2.47
NPAS1-205ENST00000600352 RIMBP3CA6NJZ7 1639 aa30.45■■■□□ 2.47
NPAS1-205ENST00000600352 RIMBP3BA6NNM3 1639 aa30.45■■■□□ 2.47
NPAS1-205ENST00000600352 RIMBP3Q9UFD9 1639 aa30.45■■■□□ 2.47
NPAS1-205ENST00000600352 KIF27Q86VH2 1401 aa30.45■■■□□ 2.46
NPAS1-205ENST00000600352 ARHGEF11O15085 1522 aa30.41■■■□□ 2.46
NPAS1-205ENST00000600352 IGF1RP08069 1367 aa30.36■■■□□ 2.45
NPAS1-205ENST00000600352 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
NPAS1-205ENST00000600352 NUP160Q12769 1436 aa30.34■■■□□ 2.45
NPAS1-205ENST00000600352 CUL7Q14999 1698 aa30.32■■■□□ 2.44
NPAS1-205ENST00000600352 TRIM41Q8WV44 630 aa30.26■■■□□ 2.43
NPAS1-205ENST00000600352 RUSC2Q8N2Y8 1516 aa30.26■■■□□ 2.43
NPAS1-205ENST00000600352 ARAP1Q96P48 1450 aa30.19■■■□□ 2.42
NPAS1-205ENST00000600352 SHROOM2Q13796 1616 aa30.16■■■□□ 2.42
NPAS1-205ENST00000600352 CARMIL1Q5VZK9 1371 aa30.15■■■□□ 2.42
NPAS1-205ENST00000600352 ERCC6L2Q5T890 1561 aa30.1■■■□□ 2.41
NPAS1-205ENST00000600352 CYB5RLQ6IPT4 315 aa30.02■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms