RNA–Protein interactions for RNA: ENST00000600350.1

PAK4-211, Transcript of p21 (RAC1) activated kinase 4, humanhuman

TSL 2

Gene PAK4, Length 549 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAK4-211ENST00000600350 NISCHQ9Y2I1 1504 aa31.15■■■□□ 2.58
PAK4-211ENST00000600350 CCDC180Q9P1Z9 1646 aa27.76■■■□□ 2.03
PAK4-211ENST00000600350 ABCC9O60706 1549 aa27.19■■□□□ 1.94
PAK4-211ENST00000600350 RB1CC1Q8TDY2 1594 aa26.18■■□□□ 1.78
PAK4-211ENST00000600350 NACADO15069 1562 aa26.15■■□□□ 1.78
PAK4-211ENST00000600350 MYO15BQ96JP2 1530 aa26.01■■□□□ 1.75
PAK4-211ENST00000600350 DCAF8L2P0C7V8 631 aa25.98■■□□□ 1.75
PAK4-211ENST00000600350 ZCCHC6Q5VYS8 1495 aaKnown RBP25.93■■□□□ 1.74
PAK4-211ENST00000600350 DCAF1Q9Y4B6 1507 aa25.83■■□□□ 1.73
PAK4-211ENST00000600350 UNC13AQ9UPW8 1703 aa25.51■■□□□ 1.67
PAK4-211ENST00000600350 PABPN1Q86U42 306 aaKnown RBP eCLIP25.38■■□□□ 1.65
PAK4-211ENST00000600350 BICRAQ9NZM4 1560 aa25.36■■□□□ 1.65
PAK4-211ENST00000600350 SCRIBQ14160 1630 aa25.24■■□□□ 1.63
PAK4-211ENST00000600350 SHROOM4Q9ULL8 1493 aa25.21■■□□□ 1.63
PAK4-211ENST00000600350 DNAJC5BQ9UF47 199 aa25.05■■□□□ 1.6
PAK4-211ENST00000600350 EIF4G1Q04637 1599 aaKnown RBP24.71■■□□□ 1.55
PAK4-211ENST00000600350 CC2D2AQ9P2K1 1620 aa24.62■■□□□ 1.53
PAK4-211ENST00000600350 CECR2Q9BXF3 1484 aa24.49■■□□□ 1.51
PAK4-211ENST00000600350 SMARCA4P51532 1647 aa24.17■■□□□ 1.46
PAK4-211ENST00000600350 BAZ1AQ9NRL2 1556 aaPredicted RBP24.17■■□□□ 1.46
PAK4-211ENST00000600350 NCAPD3P42695 1498 aa24.13■■□□□ 1.45
PAK4-211ENST00000600350 ATAD2BQ9ULI0 1458 aa24.09■■□□□ 1.45
PAK4-211ENST00000600350 SMARCA2P51531 1590 aa24.08■■□□□ 1.45
PAK4-211ENST00000600350 PEG3Q9GZU2 1588 aa24■■□□□ 1.43
PAK4-211ENST00000600350 HMGXB3Q12766 1538 aa24■■□□□ 1.43
PAK4-211ENST00000600350 MROH2BQ7Z745 1585 aa23.97■■□□□ 1.43
PAK4-211ENST00000600350 BAZ1BQ9UIG0 1483 aaKnown RBP23.88■■□□□ 1.41
PAK4-211ENST00000600350 RSF1Q96T23 1441 aaPredicted RBP23.68■■□□□ 1.38
PAK4-211ENST00000600350 WIZO95785 1651 aa23.68■■□□□ 1.38
PAK4-211ENST00000600350 LAMC3Q9Y6N6 1575 aa23.5■■□□□ 1.35
PAK4-211ENST00000600350 NESP48681 1621 aa23.49■■□□□ 1.35
PAK4-211ENST00000600350 ERCC6Q03468 1493 aa23.49■■□□□ 1.35
PAK4-211ENST00000600350 TOP2AP11388 1531 aaKnown RBP23.48■■□□□ 1.35
PAK4-211ENST00000600350 CADPSQ9ULU8 1353 aa23.4■■□□□ 1.34
PAK4-211ENST00000600350 PDS5BQ9NTI5 1447 aa23.35■■□□□ 1.33
PAK4-211ENST00000600350 CUX2O14529 1486 aa23.33■■□□□ 1.33
PAK4-211ENST00000600350 CFTRP13569 1480 aa23.25■■□□□ 1.31
PAK4-211ENST00000600350 KIF21AQ7Z4S6 1674 aa23.21■■□□□ 1.31
PAK4-211ENST00000600350 THOC2Q8NI27 1593 aaKnown RBP23.2■■□□□ 1.3
PAK4-211ENST00000600350 CCDC88BA6NC98 1476 aa23.18■■□□□ 1.3
PAK4-211ENST00000600350 FANCD2Q9BXW9 1451 aa23.11■■□□□ 1.29
PAK4-211ENST00000600350 CEP164Q9UPV0 1460 aa23.11■■□□□ 1.29
PAK4-211ENST00000600350 MRC2Q9UBG0 1479 aa23.1■■□□□ 1.29
PAK4-211ENST00000600350 WDR62O43379 1518 aa23.03■■□□□ 1.28
PAK4-211ENST00000600350 PRDM2Q13029 1718 aa23.02■■□□□ 1.28
PAK4-211ENST00000600350 SUPT5HO00267 1087 aaKnown RBP22.91■■□□□ 1.26
PAK4-211ENST00000600350 URB2Q14146 1524 aaKnown RBP22.87■■□□□ 1.25
PAK4-211ENST00000600350 ABCC8Q09428 1581 aa22.78■■□□□ 1.24
PAK4-211ENST00000600350 TOPBP1Q92547 1522 aa22.72■■□□□ 1.23
PAK4-211ENST00000600350 DNAJC5Q9H3Z4 198 aa22.71■■□□□ 1.23
PAK4-211ENST00000600350 DNMBPQ6XZF7 1577 aa22.7■■□□□ 1.22
PAK4-211ENST00000600350 IFT140Q96RY7 1462 aa22.64■■□□□ 1.21
PAK4-211ENST00000600350 POLA1P09884 1462 aaPredicted RBP22.53■■□□□ 1.2
PAK4-211ENST00000600350 CUX1P39880 1505 aa22.51■■□□□ 1.19
PAK4-211ENST00000600350 ZNF608Q9ULD9 1512 aaPredicted RBP22.49■■□□□ 1.19
PAK4-211ENST00000600350 TARBP1Q13395 1621 aaKnown RBP22.49■■□□□ 1.19
PAK4-211ENST00000600350 FGD5Q6ZNL6 1462 aa22.44■■□□□ 1.18
PAK4-211ENST00000600350 SOGA1O94964 1423 aa22.43■■□□□ 1.18
PAK4-211ENST00000600350 EIF4G3O43432 1585 aaKnown RBP22.42■■□□□ 1.18
PAK4-211ENST00000600350 RAD54L2Q9Y4B4 1467 aa22.39■■□□□ 1.17
PAK4-211ENST00000600350 WDR97A6NE52 1622 aa22.38■■□□□ 1.17
PAK4-211ENST00000600350 AQRO60306 1485 aaKnown RBP eCLIP22.35■■□□□ 1.173e-12■■■■■ 47.9
PAK4-211ENST00000600350 WRNQ14191 1432 aaPredicted RBP eCLIP22.34■■□□□ 1.17
PAK4-211ENST00000600350 OSCARQ8IYS5 282 aa22.32■■□□□ 1.16
PAK4-211ENST00000600350 TDRD9Q8NDG6 1382 aaKnown RBP22.3■■□□□ 1.16
PAK4-211ENST00000600350 TOP2BQ02880 1626 aa22.3■■□□□ 1.16
PAK4-211ENST00000600350 BIVM-ERCC5R4GMW8 1640 aa22.29■■□□□ 1.16
PAK4-211ENST00000600350 ABCA10Q8WWZ4 1543 aa22.26■■□□□ 1.15
PAK4-211ENST00000600350 SYNJ1O43426 1573 aa22.25■■□□□ 1.15
PAK4-211ENST00000600350 GRIN2BQ13224 1484 aa22.21■■□□□ 1.15
PAK4-211ENST00000600350 GAPVD1Q14C86 1478 aa22.18■■□□□ 1.14
PAK4-211ENST00000600350 MAGI1Q96QZ7 1491 aaPredicted RBP22.17■■□□□ 1.14
PAK4-211ENST00000600350 ABCA5Q8WWZ7 1642 aa22.16■■□□□ 1.14
PAK4-211ENST00000600350 SNAPC4Q5SXM2 1469 aa22.15■■□□□ 1.14
PAK4-211ENST00000600350 CHD1O14646 1710 aa22.11■■□□□ 1.13
PAK4-211ENST00000600350 PBRM1Q86U86 1689 aa22.1■■□□□ 1.13
PAK4-211ENST00000600350 FBLN2P98095 1184 aa22.08■■□□□ 1.13
PAK4-211ENST00000600350 SYNJ2O15056 1496 aa22.08■■□□□ 1.12
PAK4-211ENST00000600350 CHMP7Q8WUX9 453 aaPredicted RBP22.05■■□□□ 1.12
PAK4-211ENST00000600350 ERICH3Q5RHP9 1530 aa22■■□□□ 1.11
PAK4-211ENST00000600350 ADAMTS12P58397 1594 aa21.95■■□□□ 1.1
PAK4-211ENST00000600350 FHAD1B1AJZ9 1412 aa21.94■■□□□ 1.1
PAK4-211ENST00000600350 ARHGEF11O15085 1522 aa21.94■■□□□ 1.1
PAK4-211ENST00000600350 CLASP1Q7Z460 1538 aa21.93■■□□□ 1.1
PAK4-211ENST00000600350 RIMBP3CA6NJZ7 1639 aa21.92■■□□□ 1.1
PAK4-211ENST00000600350 RIMBP3BA6NNM3 1639 aa21.92■■□□□ 1.1
PAK4-211ENST00000600350 RIMBP3Q9UFD9 1639 aa21.92■■□□□ 1.1
PAK4-211ENST00000600350 GRIN2AQ12879 1464 aa21.91■■□□□ 1.1
PAK4-211ENST00000600350 KIF27Q86VH2 1401 aa21.89■■□□□ 1.1
PAK4-211ENST00000600350 NUP160Q12769 1436 aa21.84■■□□□ 1.09
PAK4-211ENST00000600350 TRIM41Q8WV44 630 aa21.84■■□□□ 1.09
PAK4-211ENST00000600350 IGF1RP08069 1367 aa21.81■■□□□ 1.08
PAK4-211ENST00000600350 CEP170Q5SW79 1584 aa21.78■■□□□ 1.08
PAK4-211ENST00000600350 CUL7Q14999 1698 aa21.76■■□□□ 1.07
PAK4-211ENST00000600350 ARAP1Q96P48 1450 aa21.74■■□□□ 1.07
PAK4-211ENST00000600350 CYB5RLQ6IPT4 315 aa21.71■■□□□ 1.07
PAK4-211ENST00000600350 SHROOM2Q13796 1616 aa21.67■■□□□ 1.06
PAK4-211ENST00000600350 CARMIL1Q5VZK9 1371 aa21.67■■□□□ 1.06
PAK4-211ENST00000600350 RUSC2Q8N2Y8 1516 aa21.63■■□□□ 1.05
PAK4-211ENST00000600350 KIAA0586Q9BVV6 1533 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms