RNA–Protein interactions for RNA: ENST00000600296.5

U2AF1L4-220, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 3

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-220ENST00000600296 NISCHQ9Y2I1 1504 aa38.54■■■■□ 3.76
U2AF1L4-220ENST00000600296 CCDC180Q9P1Z9 1646 aa34.02■■■■□ 3.04
U2AF1L4-220ENST00000600296 ABCC9O60706 1549 aa32.67■■■□□ 2.82
U2AF1L4-220ENST00000600296 ZCCHC6Q5VYS8 1495 aaKnown RBP32.35■■■□□ 2.77
U2AF1L4-220ENST00000600296 DCAF1Q9Y4B6 1507 aa32.02■■■□□ 2.72
U2AF1L4-220ENST00000600296 MYO15BQ96JP2 1530 aa31.82■■■□□ 2.68
U2AF1L4-220ENST00000600296 NACADO15069 1562 aa31.65■■■□□ 2.66
U2AF1L4-220ENST00000600296 DCAF8L2P0C7V8 631 aa31.46■■■□□ 2.63
U2AF1L4-220ENST00000600296 RB1CC1Q8TDY2 1594 aa31.46■■■□□ 2.63
U2AF1L4-220ENST00000600296 SCRIBQ14160 1630 aa30.97■■■□□ 2.55
U2AF1L4-220ENST00000600296 UNC13AQ9UPW8 1703 aa30.94■■■□□ 2.54
U2AF1L4-220ENST00000600296 SHROOM4Q9ULL8 1493 aa30.8■■■□□ 2.52
U2AF1L4-220ENST00000600296 PABPN1Q86U42 306 aaKnown RBP eCLIP30.6■■■□□ 2.49
U2AF1L4-220ENST00000600296 BICRAQ9NZM4 1560 aa30.54■■■□□ 2.48
U2AF1L4-220ENST00000600296 DNAJC5BQ9UF47 199 aa30.43■■■□□ 2.46
U2AF1L4-220ENST00000600296 CECR2Q9BXF3 1484 aa29.87■■■□□ 2.37
U2AF1L4-220ENST00000600296 BAZ1AQ9NRL2 1556 aaPredicted RBP29.82■■■□□ 2.36
U2AF1L4-220ENST00000600296 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
U2AF1L4-220ENST00000600296 MROH2BQ7Z745 1585 aa29.71■■■□□ 2.35
U2AF1L4-220ENST00000600296 RSF1Q96T23 1441 aaPredicted RBP29.66■■■□□ 2.34
U2AF1L4-220ENST00000600296 EIF4G1Q04637 1599 aaKnown RBP29.6■■■□□ 2.33
U2AF1L4-220ENST00000600296 PEG3Q9GZU2 1588 aa29.52■■■□□ 2.32
U2AF1L4-220ENST00000600296 WIZO95785 1651 aa29.48■■■□□ 2.31
U2AF1L4-220ENST00000600296 CC2D2AQ9P2K1 1620 aa29.45■■■□□ 2.31
U2AF1L4-220ENST00000600296 SUPT5HO00267 1087 aaKnown RBP29.36■■■□□ 2.29
U2AF1L4-220ENST00000600296 SMARCA2P51531 1590 aa29.35■■■□□ 2.29
U2AF1L4-220ENST00000600296 ATAD2BQ9ULI0 1458 aa29.3■■■□□ 2.28
U2AF1L4-220ENST00000600296 TOP2AP11388 1531 aaKnown RBP29.22■■■□□ 2.27
U2AF1L4-220ENST00000600296 HMGXB3Q12766 1538 aa29.19■■■□□ 2.26
U2AF1L4-220ENST00000600296 NCAPD3P42695 1498 aa29.15■■■□□ 2.26
U2AF1L4-220ENST00000600296 BAZ1BQ9UIG0 1483 aaKnown RBP29.09■■■□□ 2.25
U2AF1L4-220ENST00000600296 CCDC88BA6NC98 1476 aa28.78■■■□□ 2.2
U2AF1L4-220ENST00000600296 PRDM2Q13029 1718 aa28.48■■■□□ 2.15
U2AF1L4-220ENST00000600296 CFTRP13569 1480 aa28.38■■■□□ 2.13
U2AF1L4-220ENST00000600296 LAMC3Q9Y6N6 1575 aa28.3■■■□□ 2.12
U2AF1L4-220ENST00000600296 CADPSQ9ULU8 1353 aa28.29■■■□□ 2.12
U2AF1L4-220ENST00000600296 NESP48681 1621 aa28.21■■■□□ 2.11
U2AF1L4-220ENST00000600296 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
U2AF1L4-220ENST00000600296 ABCC8Q09428 1581 aa28.04■■■□□ 2.08
U2AF1L4-220ENST00000600296 CHIC1Q5VXU3 224 aa28.04■■■□□ 2.08
U2AF1L4-220ENST00000600296 FANCD2Q9BXW9 1451 aa28■■■□□ 2.07
U2AF1L4-220ENST00000600296 KIF21AQ7Z4S6 1674 aa27.99■■■□□ 2.07
U2AF1L4-220ENST00000600296 PDS5BQ9NTI5 1447 aa27.94■■■□□ 2.06
U2AF1L4-220ENST00000600296 BIVM-ERCC5R4GMW8 1640 aa27.92■■■□□ 2.06
U2AF1L4-220ENST00000600296 WRNQ14191 1432 aaPredicted RBP eCLIP27.92■■■□□ 2.06
U2AF1L4-220ENST00000600296 SYNJ1O43426 1573 aa27.9■■■□□ 2.06
U2AF1L4-220ENST00000600296 CEP164Q9UPV0 1460 aa27.89■■■□□ 2.05
U2AF1L4-220ENST00000600296 TOP2BQ02880 1626 aa27.88■■■□□ 2.05
U2AF1L4-220ENST00000600296 CUX2O14529 1486 aa27.84■■■□□ 2.05
U2AF1L4-220ENST00000600296 CUX1P39880 1505 aa27.83■■■□□ 2.05
U2AF1L4-220ENST00000600296 DNMBPQ6XZF7 1577 aa27.78■■■□□ 2.04
U2AF1L4-220ENST00000600296 TRIM41Q8WV44 630 aa27.71■■■□□ 2.03
U2AF1L4-220ENST00000600296 URB2Q14146 1524 aaKnown RBP27.71■■■□□ 2.03
U2AF1L4-220ENST00000600296 TOPBP1Q92547 1522 aa27.69■■■□□ 2.02
U2AF1L4-220ENST00000600296 THOC2Q8NI27 1593 aaKnown RBP27.69■■■□□ 2.02
U2AF1L4-220ENST00000600296 MRC2Q9UBG0 1479 aa27.68■■■□□ 2.02
U2AF1L4-220ENST00000600296 WDR62O43379 1518 aa27.62■■■□□ 2.01
U2AF1L4-220ENST00000600296 FGD5Q6ZNL6 1462 aa27.56■■■□□ 2
U2AF1L4-220ENST00000600296 POLA1P09884 1462 aaPredicted RBP27.51■■■□□ 2
U2AF1L4-220ENST00000600296 DNAJC5Q9H3Z4 198 aa27.51■■□□□ 1.99
U2AF1L4-220ENST00000600296 WDR97A6NE52 1622 aa27.49■■□□□ 1.99
U2AF1L4-220ENST00000600296 TARBP1Q13395 1621 aaKnown RBP27.4■■□□□ 1.98
U2AF1L4-220ENST00000600296 EEA1Q15075 1411 aa27.38■■□□□ 1.97
U2AF1L4-220ENST00000600296 ABCA10Q8WWZ4 1543 aa27.37■■□□□ 1.97
U2AF1L4-220ENST00000600296 SOGA1O94964 1423 aa27.36■■□□□ 1.97
U2AF1L4-220ENST00000600296 RAD54L2Q9Y4B4 1467 aa27.32■■□□□ 1.96
U2AF1L4-220ENST00000600296 RUSC2Q8N2Y8 1516 aa27.3■■□□□ 1.96
U2AF1L4-220ENST00000600296 ABCA5Q8WWZ7 1642 aa27.27■■□□□ 1.96
U2AF1L4-220ENST00000600296 IFT140Q96RY7 1462 aa27.26■■□□□ 1.95
U2AF1L4-220ENST00000600296 KIF27Q86VH2 1401 aa27.24■■□□□ 1.95
U2AF1L4-220ENST00000600296 PBRM1Q86U86 1689 aa27.13■■□□□ 1.93
U2AF1L4-220ENST00000600296 KIF21BO75037 1637 aa27.12■■□□□ 1.93
U2AF1L4-220ENST00000600296 EIF4G3O43432 1585 aaKnown RBP27.09■■□□□ 1.93
U2AF1L4-220ENST00000600296 ERICH3Q5RHP9 1530 aa27.08■■□□□ 1.93
U2AF1L4-220ENST00000600296 FAM9AQ8IZU1 332 aaPredicted RBP27.07■■□□□ 1.92
U2AF1L4-220ENST00000600296 GAPVD1Q14C86 1478 aa27.06■■□□□ 1.92
U2AF1L4-220ENST00000600296 CUL7Q14999 1698 aa27.06■■□□□ 1.92
U2AF1L4-220ENST00000600296 ZNF608Q9ULD9 1512 aaPredicted RBP27.06■■□□□ 1.92
U2AF1L4-220ENST00000600296 CSRNP3Q8WYN3 585 aa27.05■■□□□ 1.92
U2AF1L4-220ENST00000600296 PRXQ9BXM0 1461 aa27.02■■□□□ 1.92
U2AF1L4-220ENST00000600296 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
U2AF1L4-220ENST00000600296 IGF1RP08069 1367 aa27■■□□□ 1.91
U2AF1L4-220ENST00000600296 AQRO60306 1485 aaKnown RBP eCLIP26.96■■□□□ 1.91
U2AF1L4-220ENST00000600296 GRIN2BQ13224 1484 aa26.95■■□□□ 1.91
U2AF1L4-220ENST00000600296 GOLGA3Q08378 1498 aa26.93■■□□□ 1.9
U2AF1L4-220ENST00000600296 ADAMTS12P58397 1594 aa26.92■■□□□ 1.9
U2AF1L4-220ENST00000600296 RAPGEF2Q9Y4G8 1499 aa26.87■■□□□ 1.89
U2AF1L4-220ENST00000600296 CARMIL1Q5VZK9 1371 aa26.84■■□□□ 1.89
U2AF1L4-220ENST00000600296 MAGI1Q96QZ7 1491 aaPredicted RBP26.82■■□□□ 1.88
U2AF1L4-220ENST00000600296 LOC105371045A0A1W2PR82 267 aa26.8■■□□□ 1.88
U2AF1L4-220ENST00000600296 SNAPC4Q5SXM2 1469 aa26.8■■□□□ 1.88
U2AF1L4-220ENST00000600296 OSCARQ8IYS5 282 aa26.79■■□□□ 1.88
U2AF1L4-220ENST00000600296 FHAD1B1AJZ9 1412 aa26.79■■□□□ 1.88
U2AF1L4-220ENST00000600296 CTTNBP2Q8WZ74 1663 aa26.73■■□□□ 1.87
U2AF1L4-220ENST00000600296 TNIKQ9UKE5 1360 aa26.72■■□□□ 1.87
U2AF1L4-220ENST00000600296 SYNJ2O15056 1496 aa26.68■■□□□ 1.86
U2AF1L4-220ENST00000600296 GRIN2AQ12879 1464 aa26.63■■□□□ 1.85
U2AF1L4-220ENST00000600296 CHD1O14646 1710 aa26.62■■□□□ 1.85
U2AF1L4-220ENST00000600296 EHMT2Q96KQ7 1210 aa26.58■■□□□ 1.85
U2AF1L4-220ENST00000600296 UBTFP17480 764 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms