RNA–Protein interactions for RNA: ENST00000600227.5

FKRP-218, Transcript of fukutin related protein, humanhuman

TSL 4

Gene FKRP, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FKRP-218ENST00000600227 NISCHQ9Y2I1 1504 aa46.67■■■■■ 5.06
FKRP-218ENST00000600227 CCDC180Q9P1Z9 1646 aa41.53■■■■■ 4.24
FKRP-218ENST00000600227 ABCC9O60706 1549 aa40.37■■■■■ 4.05
FKRP-218ENST00000600227 RB1CC1Q8TDY2 1594 aa38.95■■■■□ 3.83
FKRP-218ENST00000600227 NACADO15069 1562 aa38.95■■■■□ 3.83
FKRP-218ENST00000600227 ZCCHC6Q5VYS8 1495 aaKnown RBP38.92■■■■□ 3.82
FKRP-218ENST00000600227 MYO15BQ96JP2 1530 aa38.8■■■■□ 3.8
FKRP-218ENST00000600227 DCAF8L2P0C7V8 631 aa38.71■■■■□ 3.79
FKRP-218ENST00000600227 DCAF1Q9Y4B6 1507 aa38.68■■■■□ 3.78
FKRP-218ENST00000600227 UNC13AQ9UPW8 1703 aa38.15■■■■□ 3.7
FKRP-218ENST00000600227 BICRAQ9NZM4 1560 aa37.8■■■■□ 3.64
FKRP-218ENST00000600227 SCRIBQ14160 1630 aa37.8■■■■□ 3.64
FKRP-218ENST00000600227 PABPN1Q86U42 306 aaKnown RBP eCLIP37.66■■■■□ 3.62
FKRP-218ENST00000600227 SHROOM4Q9ULL8 1493 aa37.45■■■■□ 3.59
FKRP-218ENST00000600227 DNAJC5BQ9UF47 199 aa36.89■■■■□ 3.5
FKRP-218ENST00000600227 EIF4G1Q04637 1599 aaKnown RBP36.78■■■■□ 3.48
FKRP-218ENST00000600227 CC2D2AQ9P2K1 1620 aa36.59■■■■□ 3.45
FKRP-218ENST00000600227 CECR2Q9BXF3 1484 aa36.31■■■■□ 3.4
FKRP-218ENST00000600227 SMARCA4P51532 1647 aa36.21■■■■□ 3.39
FKRP-218ENST00000600227 BAZ1AQ9NRL2 1556 aaPredicted RBP36.17■■■■□ 3.38
FKRP-218ENST00000600227 MROH2BQ7Z745 1585 aa35.95■■■■□ 3.35
FKRP-218ENST00000600227 ATAD2BQ9ULI0 1458 aa35.94■■■■□ 3.34
FKRP-218ENST00000600227 SMARCA2P51531 1590 aa35.93■■■■□ 3.34
FKRP-218ENST00000600227 NCAPD3P42695 1498 aa35.92■■■■□ 3.34
FKRP-218ENST00000600227 PEG3Q9GZU2 1588 aa35.89■■■■□ 3.34
FKRP-218ENST00000600227 HMGXB3Q12766 1538 aa35.8■■■■□ 3.32
FKRP-218ENST00000600227 BAZ1BQ9UIG0 1483 aaKnown RBP35.64■■■■□ 3.3
FKRP-218ENST00000600227 WIZO95785 1651 aa35.59■■■■□ 3.29
FKRP-218ENST00000600227 RSF1Q96T23 1441 aaPredicted RBP35.57■■■■□ 3.28
FKRP-218ENST00000600227 TOP2AP11388 1531 aaKnown RBP35.23■■■■□ 3.23
FKRP-218ENST00000600227 LAMC3Q9Y6N6 1575 aa34.98■■■■□ 3.19
FKRP-218ENST00000600227 NESP48681 1621 aa34.98■■■■□ 3.19
FKRP-218ENST00000600227 CADPSQ9ULU8 1353 aa34.84■■■■□ 3.17
FKRP-218ENST00000600227 CCDC88BA6NC98 1476 aa34.77■■■■□ 3.16
FKRP-218ENST00000600227 ERCC6Q03468 1493 aa34.77■■■■□ 3.16
FKRP-218ENST00000600227 CFTRP13569 1480 aa34.7■■■■□ 3.15
FKRP-218ENST00000600227 PDS5BQ9NTI5 1447 aa34.67■■■■□ 3.14
FKRP-218ENST00000600227 KIF21AQ7Z4S6 1674 aa34.65■■■■□ 3.14
FKRP-218ENST00000600227 SUPT5HO00267 1087 aaKnown RBP34.6■■■■□ 3.13
FKRP-218ENST00000600227 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
FKRP-218ENST00000600227 THOC2Q8NI27 1593 aaKnown RBP34.52■■■■□ 3.12
FKRP-218ENST00000600227 FANCD2Q9BXW9 1451 aa34.45■■■■□ 3.1
FKRP-218ENST00000600227 CUX2O14529 1486 aa34.43■■■■□ 3.1
FKRP-218ENST00000600227 CEP164Q9UPV0 1460 aa34.41■■■■□ 3.1
FKRP-218ENST00000600227 MRC2Q9UBG0 1479 aa34.34■■■■□ 3.09
FKRP-218ENST00000600227 WDR62O43379 1518 aa34.27■■■■□ 3.08
FKRP-218ENST00000600227 URB2Q14146 1524 aaKnown RBP34.12■■■■□ 3.05
FKRP-218ENST00000600227 ABCC8Q09428 1581 aa33.94■■■■□ 3.02
FKRP-218ENST00000600227 DNMBPQ6XZF7 1577 aa33.94■■■■□ 3.02
FKRP-218ENST00000600227 TOPBP1Q92547 1522 aa33.93■■■■□ 3.02
FKRP-218ENST00000600227 CUX1P39880 1505 aa33.73■■■□□ 2.99
FKRP-218ENST00000600227 IFT140Q96RY7 1462 aa33.69■■■□□ 2.98
FKRP-218ENST00000600227 POLA1P09884 1462 aaPredicted RBP33.65■■■□□ 2.98
FKRP-218ENST00000600227 TARBP1Q13395 1621 aaKnown RBP33.61■■■□□ 2.97
FKRP-218ENST00000600227 FGD5Q6ZNL6 1462 aa33.58■■■□□ 2.97
FKRP-218ENST00000600227 BIVM-ERCC5R4GMW8 1640 aa33.53■■■□□ 2.96
FKRP-218ENST00000600227 WRNQ14191 1432 aaPredicted RBP eCLIP33.52■■■□□ 2.96
FKRP-218ENST00000600227 ZNF608Q9ULD9 1512 aaPredicted RBP33.51■■■□□ 2.95
FKRP-218ENST00000600227 TOP2BQ02880 1626 aa33.5■■■□□ 2.95
FKRP-218ENST00000600227 SYNJ1O43426 1573 aa33.48■■■□□ 2.95
FKRP-218ENST00000600227 RAD54L2Q9Y4B4 1467 aa33.46■■■□□ 2.95
FKRP-218ENST00000600227 SOGA1O94964 1423 aa33.45■■■□□ 2.95
FKRP-218ENST00000600227 EIF4G3O43432 1585 aaKnown RBP33.44■■■□□ 2.94
FKRP-218ENST00000600227 WDR97A6NE52 1622 aa33.4■■■□□ 2.94
FKRP-218ENST00000600227 AQRO60306 1485 aaKnown RBP eCLIP33.3■■■□□ 2.92
FKRP-218ENST00000600227 ABCA10Q8WWZ4 1543 aa33.28■■■□□ 2.92
FKRP-218ENST00000600227 TDRD9Q8NDG6 1382 aaKnown RBP33.23■■■□□ 2.91
FKRP-218ENST00000600227 ABCA5Q8WWZ7 1642 aa33.19■■■□□ 2.9
FKRP-218ENST00000600227 DNAJC5Q9H3Z4 198 aa33.14■■■□□ 2.9
FKRP-218ENST00000600227 PBRM1Q86U86 1689 aa33.11■■■□□ 2.89
FKRP-218ENST00000600227 GAPVD1Q14C86 1478 aa33.11■■■□□ 2.89
FKRP-218ENST00000600227 GRIN2BQ13224 1484 aa33.1■■■□□ 2.89
FKRP-218ENST00000600227 SNAPC4Q5SXM2 1469 aa33.04■■■□□ 2.88
FKRP-218ENST00000600227 MAGI1Q96QZ7 1491 aaPredicted RBP33.02■■■□□ 2.88
FKRP-218ENST00000600227 CHD1O14646 1710 aa33■■■□□ 2.87
FKRP-218ENST00000600227 OSCARQ8IYS5 282 aa32.91■■■□□ 2.86
FKRP-218ENST00000600227 ERICH3Q5RHP9 1530 aa32.9■■■□□ 2.86
FKRP-218ENST00000600227 SYNJ2O15056 1496 aa32.87■■■□□ 2.85
FKRP-218ENST00000600227 ADAMTS12P58397 1594 aa32.85■■■□□ 2.85
FKRP-218ENST00000600227 KIF27Q86VH2 1401 aa32.8■■■□□ 2.84
FKRP-218ENST00000600227 FBLN2P98095 1184 aa32.78■■■□□ 2.84
FKRP-218ENST00000600227 CHMP7Q8WUX9 453 aaPredicted RBP32.74■■■□□ 2.83
FKRP-218ENST00000600227 FHAD1B1AJZ9 1412 aa32.73■■■□□ 2.83
FKRP-218ENST00000600227 TRIM41Q8WV44 630 aa32.7■■■□□ 2.83
FKRP-218ENST00000600227 GRIN2AQ12879 1464 aa32.68■■■□□ 2.82
FKRP-218ENST00000600227 CLASP1Q7Z460 1538 aa32.66■■■□□ 2.82
FKRP-218ENST00000600227 CUL7Q14999 1698 aa32.65■■■□□ 2.82
FKRP-218ENST00000600227 IGF1RP08069 1367 aa32.64■■■□□ 2.82
FKRP-218ENST00000600227 NUP160Q12769 1436 aa32.55■■■□□ 2.8
FKRP-218ENST00000600227 CEP170Q5SW79 1584 aa32.54■■■□□ 2.8
FKRP-218ENST00000600227 RUSC2Q8N2Y8 1516 aa32.54■■■□□ 2.8
FKRP-218ENST00000600227 RIMBP3CA6NJZ7 1639 aa32.49■■■□□ 2.79
FKRP-218ENST00000600227 RIMBP3BA6NNM3 1639 aa32.49■■■□□ 2.79
FKRP-218ENST00000600227 RIMBP3Q9UFD9 1639 aa32.49■■■□□ 2.79
FKRP-218ENST00000600227 ARHGEF11O15085 1522 aa32.48■■■□□ 2.79
FKRP-218ENST00000600227 CARMIL1Q5VZK9 1371 aa32.43■■■□□ 2.78
FKRP-218ENST00000600227 CHIC1Q5VXU3 224 aa32.41■■■□□ 2.78
FKRP-218ENST00000600227 SHROOM2Q13796 1616 aa32.34■■■□□ 2.77
FKRP-218ENST00000600227 RAPGEF2Q9Y4G8 1499 aa32.29■■■□□ 2.76
FKRP-218ENST00000600227 EEA1Q15075 1411 aa32.27■■■□□ 2.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms