RNA–Protein interactions for RNA: ENST00000600216.5

TUBB4A-211, Transcript of tubulin beta 4A class IVa, humanhuman

TSL 5

Gene TUBB4A, Length 530 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4A-211ENST00000600216 NISCHQ9Y2I1 1504 aa35.19■■■■□ 3.22
TUBB4A-211ENST00000600216 ABCC9O60706 1549 aa32.02■■■□□ 2.72
TUBB4A-211ENST00000600216 CCDC180Q9P1Z9 1646 aa31.67■■■□□ 2.66
TUBB4A-211ENST00000600216 DNAJC5BQ9UF47 199 aa31.07■■■□□ 2.56
TUBB4A-211ENST00000600216 RB1CC1Q8TDY2 1594 aa30.24■■■□□ 2.43
TUBB4A-211ENST00000600216 NACADO15069 1562 aa30■■■□□ 2.39
TUBB4A-211ENST00000600216 DCAF8L2P0C7V8 631 aa29.73■■■□□ 2.35
TUBB4A-211ENST00000600216 PABPN1Q86U42 306 aaKnown RBP eCLIP29.61■■■□□ 2.33
TUBB4A-211ENST00000600216 MYO15BQ96JP2 1530 aa29.56■■■□□ 2.32
TUBB4A-211ENST00000600216 UNC13AQ9UPW8 1703 aa29.47■■■□□ 2.31
TUBB4A-211ENST00000600216 DNAJC5Q9H3Z4 198 aa29.34■■■□□ 2.29
TUBB4A-211ENST00000600216 BICRAQ9NZM4 1560 aa29.32■■■□□ 2.28
TUBB4A-211ENST00000600216 ZCCHC6Q5VYS8 1495 aaKnown RBP29.13■■■□□ 2.25
TUBB4A-211ENST00000600216 DCAF1Q9Y4B6 1507 aa29.1■■■□□ 2.25
TUBB4A-211ENST00000600216 SHROOM4Q9ULL8 1493 aa29.03■■■□□ 2.24
TUBB4A-211ENST00000600216 CECR2Q9BXF3 1484 aa28.98■■■□□ 2.23
TUBB4A-211ENST00000600216 CC2D2AQ9P2K1 1620 aa28.91■■■□□ 2.22
TUBB4A-211ENST00000600216 SCRIBQ14160 1630 aa28.8■■■□□ 2.2
TUBB4A-211ENST00000600216 EIF4G1Q04637 1599 aaKnown RBP28.64■■■□□ 2.18
TUBB4A-211ENST00000600216 CUX2O14529 1486 aa28.08■■■□□ 2.09
TUBB4A-211ENST00000600216 ERCC6Q03468 1493 aa27.7■■■□□ 2.03
TUBB4A-211ENST00000600216 NCAPD3P42695 1498 aa27.7■■■□□ 2.02
TUBB4A-211ENST00000600216 ATAD2BQ9ULI0 1458 aa27.57■■■□□ 2
TUBB4A-211ENST00000600216 TRIM41Q8WV44 630 aa27.51■■□□□ 1.99
TUBB4A-211ENST00000600216 SMARCA2P51531 1590 aa27.51■■□□□ 1.99
TUBB4A-211ENST00000600216 HMGXB3Q12766 1538 aa27.48■■□□□ 1.99
TUBB4A-211ENST00000600216 SMARCA4P51532 1647 aa27.48■■□□□ 1.99
TUBB4A-211ENST00000600216 BAZ1AQ9NRL2 1556 aaPredicted RBP27.35■■□□□ 1.97
TUBB4A-211ENST00000600216 BAZ1BQ9UIG0 1483 aaKnown RBP27.3■■□□□ 1.96
TUBB4A-211ENST00000600216 NESP48681 1621 aa27.25■■□□□ 1.95
TUBB4A-211ENST00000600216 PEG3Q9GZU2 1588 aa27.25■■□□□ 1.95
TUBB4A-211ENST00000600216 THOC2Q8NI27 1593 aaKnown RBP27.19■■□□□ 1.94
TUBB4A-211ENST00000600216 LAMC3Q9Y6N6 1575 aa27.1■■□□□ 1.93
TUBB4A-211ENST00000600216 MROH2BQ7Z745 1585 aa27.08■■□□□ 1.93
TUBB4A-211ENST00000600216 PDS5BQ9NTI5 1447 aa26.97■■□□□ 1.91
TUBB4A-211ENST00000600216 KIF21AQ7Z4S6 1674 aa26.89■■□□□ 1.89
TUBB4A-211ENST00000600216 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
TUBB4A-211ENST00000600216 WIZO95785 1651 aa26.73■■□□□ 1.87
TUBB4A-211ENST00000600216 MRC2Q9UBG0 1479 aa26.72■■□□□ 1.87
TUBB4A-211ENST00000600216 WDR62O43379 1518 aa26.65■■□□□ 1.86
TUBB4A-211ENST00000600216 OSCARQ8IYS5 282 aa26.59■■□□□ 1.85
TUBB4A-211ENST00000600216 CEP164Q9UPV0 1460 aa26.58■■□□□ 1.85
TUBB4A-211ENST00000600216 FANCD2Q9BXW9 1451 aa26.53■■□□□ 1.84
TUBB4A-211ENST00000600216 CFTRP13569 1480 aa26.49■■□□□ 1.83
TUBB4A-211ENST00000600216 RSF1Q96T23 1441 aaPredicted RBP26.48■■□□□ 1.83
TUBB4A-211ENST00000600216 TOP2AP11388 1531 aaKnown RBP26.43■■□□□ 1.82
TUBB4A-211ENST00000600216 RIMBP3CA6NJZ7 1639 aa26.4■■□□□ 1.82
TUBB4A-211ENST00000600216 RIMBP3BA6NNM3 1639 aa26.4■■□□□ 1.82
TUBB4A-211ENST00000600216 RIMBP3Q9UFD9 1639 aa26.4■■□□□ 1.82
TUBB4A-211ENST00000600216 URB2Q14146 1524 aaKnown RBP26.29■■□□□ 1.8
TUBB4A-211ENST00000600216 ARHGEF11O15085 1522 aa26.19■■□□□ 1.78
TUBB4A-211ENST00000600216 PRDM2Q13029 1718 aa26.18■■□□□ 1.78
TUBB4A-211ENST00000600216 AEBP2Q6ZN18 517 aaPredicted RBP26.12■■□□□ 1.77
TUBB4A-211ENST00000600216 CCDC88BA6NC98 1476 aa26.11■■□□□ 1.77
TUBB4A-211ENST00000600216 TRHP20396 242 aaPredicted RBP26.07■■□□□ 1.76
TUBB4A-211ENST00000600216 IFT140Q96RY7 1462 aa26.06■■□□□ 1.76
TUBB4A-211ENST00000600216 CYB5RLQ6IPT4 315 aa26.02■■□□□ 1.76
TUBB4A-211ENST00000600216 TOPBP1Q92547 1522 aa25.99■■□□□ 1.75
TUBB4A-211ENST00000600216 ZNF608Q9ULD9 1512 aaPredicted RBP25.98■■□□□ 1.75
TUBB4A-211ENST00000600216 ABCC8Q09428 1581 aa25.98■■□□□ 1.75
TUBB4A-211ENST00000600216 DNMBPQ6XZF7 1577 aa25.9■■□□□ 1.74
TUBB4A-211ENST00000600216 ARAP1Q96P48 1450 aa25.86■■□□□ 1.73
TUBB4A-211ENST00000600216 EIF4G3O43432 1585 aaKnown RBP25.86■■□□□ 1.73
TUBB4A-211ENST00000600216 TARBP1Q13395 1621 aaKnown RBP25.77■■□□□ 1.72
TUBB4A-211ENST00000600216 AQRO60306 1485 aaKnown RBP eCLIP25.73■■□□□ 1.71
TUBB4A-211ENST00000600216 POLA1P09884 1462 aaPredicted RBP25.72■■□□□ 1.71
TUBB4A-211ENST00000600216 CHD1O14646 1710 aa25.67■■□□□ 1.7
TUBB4A-211ENST00000600216 FBLN2P98095 1184 aa25.61■■□□□ 1.69
TUBB4A-211ENST00000600216 SOGA1O94964 1423 aa25.6■■□□□ 1.69
TUBB4A-211ENST00000600216 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
TUBB4A-211ENST00000600216 TDRD9Q8NDG6 1382 aaKnown RBP25.56■■□□□ 1.68
TUBB4A-211ENST00000600216 WDR97A6NE52 1622 aa25.55■■□□□ 1.68
TUBB4A-211ENST00000600216 FGD5Q6ZNL6 1462 aa25.53■■□□□ 1.68
TUBB4A-211ENST00000600216 SNAPC4Q5SXM2 1469 aa25.48■■□□□ 1.67
TUBB4A-211ENST00000600216 CUX1P39880 1505 aa25.46■■□□□ 1.67
TUBB4A-211ENST00000600216 MAGI1Q96QZ7 1491 aaPredicted RBP25.45■■□□□ 1.66
TUBB4A-211ENST00000600216 GRIN2BQ13224 1484 aa25.41■■□□□ 1.66
TUBB4A-211ENST00000600216 CHMP7Q8WUX9 453 aaPredicted RBP25.41■■□□□ 1.66
TUBB4A-211ENST00000600216 CLASP1Q7Z460 1538 aa25.41■■□□□ 1.66
TUBB4A-211ENST00000600216 SYNJ1O43426 1573 aa25.39■■□□□ 1.66
TUBB4A-211ENST00000600216 SYNJ2O15056 1496 aa25.36■■□□□ 1.65
TUBB4A-211ENST00000600216 GAPVD1Q14C86 1478 aa25.29■■□□□ 1.64
TUBB4A-211ENST00000600216 PBRM1Q86U86 1689 aa25.26■■□□□ 1.63
TUBB4A-211ENST00000600216 ABCA10Q8WWZ4 1543 aa25.25■■□□□ 1.63
TUBB4A-211ENST00000600216 ILDR1Q86SU0 546 aaPredicted RBP25.21■■□□□ 1.63
TUBB4A-211ENST00000600216 ABCA5Q8WWZ7 1642 aa25.21■■□□□ 1.63
TUBB4A-211ENST00000600216 SUPT5HO00267 1087 aaKnown RBP25.13■■□□□ 1.61
TUBB4A-211ENST00000600216 WRNQ14191 1432 aaPredicted RBP eCLIP25.12■■□□□ 1.61
TUBB4A-211ENST00000600216 GRIN2AQ12879 1464 aa25.09■■□□□ 1.61
TUBB4A-211ENST00000600216 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
TUBB4A-211ENST00000600216 TOP2BQ02880 1626 aa25.03■■□□□ 1.6
TUBB4A-211ENST00000600216 BIVM-ERCC5R4GMW8 1640 aa25.02■■□□□ 1.6
TUBB4A-211ENST00000600216 NUP160Q12769 1436 aa25.01■■□□□ 1.59
TUBB4A-211ENST00000600216 FHAD1B1AJZ9 1412 aa24.98■■□□□ 1.59
TUBB4A-211ENST00000600216 CEP170Q5SW79 1584 aa24.97■■□□□ 1.59
TUBB4A-211ENST00000600216 ERCC6L2Q5T890 1561 aa24.95■■□□□ 1.58
TUBB4A-211ENST00000600216 KIF13AQ9H1H9 1805 aa24.94■■□□□ 1.58
TUBB4A-211ENST00000600216 ERICH3Q5RHP9 1530 aa24.94■■□□□ 1.58
TUBB4A-211ENST00000600216 SHROOM2Q13796 1616 aa24.9■■□□□ 1.58
TUBB4A-211ENST00000600216 KDM4FA0A1W2PPD8 638 aa24.84■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms