RNA–Protein interactions for RNA: ENST00000600078.5

RAB4B-206, Transcript of RAB4B, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4B, Length 715 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4B-206ENST00000600078 NISCHQ9Y2I1 1504 aa46.08■■■■■ 4.97
RAB4B-206ENST00000600078 ABCC9O60706 1549 aa42.53■■■■■ 4.4
RAB4B-206ENST00000600078 CCDC180Q9P1Z9 1646 aa41.79■■■■■ 4.28
RAB4B-206ENST00000600078 DNAJC5BQ9UF47 199 aa40.61■■■■■ 4.09
RAB4B-206ENST00000600078 RB1CC1Q8TDY2 1594 aa40.14■■■■■ 4.02
RAB4B-206ENST00000600078 NACADO15069 1562 aa39.65■■■■□ 3.94
RAB4B-206ENST00000600078 PABPN1Q86U42 306 aaKnown RBP eCLIP39.4■■■■□ 3.9
RAB4B-206ENST00000600078 UNC13AQ9UPW8 1703 aa39.32■■■■□ 3.89
RAB4B-206ENST00000600078 DCAF8L2P0C7V8 631 aa39.1■■■■□ 3.85
RAB4B-206ENST00000600078 BICRAQ9NZM4 1560 aa39.04■■■■□ 3.84
RAB4B-206ENST00000600078 MYO15BQ96JP2 1530 aa38.83■■■■□ 3.81
RAB4B-206ENST00000600078 CC2D2AQ9P2K1 1620 aa38.42■■■■□ 3.74
RAB4B-206ENST00000600078 SHROOM4Q9ULL8 1493 aa38.41■■■■□ 3.74
RAB4B-206ENST00000600078 CECR2Q9BXF3 1484 aa38.4■■■■□ 3.74
RAB4B-206ENST00000600078 ZCCHC6Q5VYS8 1495 aaKnown RBP38.22■■■■□ 3.71
RAB4B-206ENST00000600078 EIF4G1Q04637 1599 aaKnown RBP38.13■■■■□ 3.69
RAB4B-206ENST00000600078 DCAF1Q9Y4B6 1507 aa38.02■■■■□ 3.68
RAB4B-206ENST00000600078 SCRIBQ14160 1630 aa37.99■■■■□ 3.67
RAB4B-206ENST00000600078 DNAJC5Q9H3Z4 198 aa37.89■■■■□ 3.66
RAB4B-206ENST00000600078 CUX2O14529 1486 aa37.02■■■■□ 3.52
RAB4B-206ENST00000600078 ERCC6Q03468 1493 aa36.77■■■■□ 3.48
RAB4B-206ENST00000600078 NCAPD3P42695 1498 aa36.58■■■■□ 3.45
RAB4B-206ENST00000600078 ATAD2BQ9ULI0 1458 aa36.37■■■■□ 3.41
RAB4B-206ENST00000600078 NESP48681 1621 aa36.32■■■■□ 3.4
RAB4B-206ENST00000600078 HMGXB3Q12766 1538 aa36.29■■■■□ 3.4
RAB4B-206ENST00000600078 SMARCA2P51531 1590 aa36.23■■■■□ 3.39
RAB4B-206ENST00000600078 THOC2Q8NI27 1593 aaKnown RBP36.19■■■■□ 3.38
RAB4B-206ENST00000600078 SMARCA4P51532 1647 aa36.16■■■■□ 3.38
RAB4B-206ENST00000600078 BAZ1BQ9UIG0 1483 aaKnown RBP35.97■■■■□ 3.35
RAB4B-206ENST00000600078 LAMC3Q9Y6N6 1575 aa35.93■■■■□ 3.34
RAB4B-206ENST00000600078 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.33
RAB4B-206ENST00000600078 TRIM41Q8WV44 630 aa35.87■■■■□ 3.33
RAB4B-206ENST00000600078 BAZ1AQ9NRL2 1556 aaPredicted RBP35.83■■■■□ 3.33
RAB4B-206ENST00000600078 PEG3Q9GZU2 1588 aa35.82■■■■□ 3.32
RAB4B-206ENST00000600078 PDS5BQ9NTI5 1447 aa35.7■■■■□ 3.31
RAB4B-206ENST00000600078 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
RAB4B-206ENST00000600078 MRC2Q9UBG0 1479 aa35.49■■■■□ 3.27
RAB4B-206ENST00000600078 WDR62O43379 1518 aa35.46■■■■□ 3.27
RAB4B-206ENST00000600078 CADPSQ9ULU8 1353 aa35.4■■■■□ 3.26
RAB4B-206ENST00000600078 CEP164Q9UPV0 1460 aa35.17■■■■□ 3.22
RAB4B-206ENST00000600078 OSCARQ8IYS5 282 aa35.09■■■■□ 3.21
RAB4B-206ENST00000600078 WIZO95785 1651 aa35.06■■■■□ 3.2
RAB4B-206ENST00000600078 FANCD2Q9BXW9 1451 aa35.04■■■■□ 3.2
RAB4B-206ENST00000600078 RSF1Q96T23 1441 aaPredicted RBP35.01■■■■□ 3.2
RAB4B-206ENST00000600078 RIMBP3CA6NJZ7 1639 aa34.87■■■■□ 3.17
RAB4B-206ENST00000600078 RIMBP3BA6NNM3 1639 aa34.87■■■■□ 3.17
RAB4B-206ENST00000600078 RIMBP3Q9UFD9 1639 aa34.87■■■■□ 3.17
RAB4B-206ENST00000600078 CFTRP13569 1480 aa34.86■■■■□ 3.17
RAB4B-206ENST00000600078 URB2Q14146 1524 aaKnown RBP34.84■■■■□ 3.17
RAB4B-206ENST00000600078 ARHGEF11O15085 1522 aa34.65■■■■□ 3.14
RAB4B-206ENST00000600078 TOP2AP11388 1531 aaKnown RBP34.6■■■■□ 3.13
RAB4B-206ENST00000600078 PRDM2Q13029 1718 aa34.55■■■■□ 3.12
RAB4B-206ENST00000600078 ZNF608Q9ULD9 1512 aaPredicted RBP34.54■■■■□ 3.12
RAB4B-206ENST00000600078 IFT140Q96RY7 1462 aa34.48■■■■□ 3.11
RAB4B-206ENST00000600078 EIF4G3O43432 1585 aaKnown RBP34.36■■■■□ 3.09
RAB4B-206ENST00000600078 SUPT5HO00267 1087 aaKnown RBP34.34■■■■□ 3.09
RAB4B-206ENST00000600078 CYB5RLQ6IPT4 315 aa34.33■■■■□ 3.09
RAB4B-206ENST00000600078 TOPBP1Q92547 1522 aa34.3■■■■□ 3.08
RAB4B-206ENST00000600078 CHD1O14646 1710 aa34.27■■■■□ 3.08
RAB4B-206ENST00000600078 ARAP1Q96P48 1450 aa34.26■■■■□ 3.07
RAB4B-206ENST00000600078 TRHP20396 242 aaPredicted RBP34.21■■■■□ 3.07
RAB4B-206ENST00000600078 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
RAB4B-206ENST00000600078 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
RAB4B-206ENST00000600078 DNMBPQ6XZF7 1577 aa34.12■■■■□ 3.05
RAB4B-206ENST00000600078 TARBP1Q13395 1621 aaKnown RBP34.1■■■■□ 3.05
RAB4B-206ENST00000600078 AQRO60306 1485 aaKnown RBP eCLIP34.07■■■■□ 3.052e-6■■□□□ 13
RAB4B-206ENST00000600078 FBLN2P98095 1184 aa33.95■■■■□ 3.03
RAB4B-206ENST00000600078 POLA1P09884 1462 aaPredicted RBP33.9■■■■□ 3.02
RAB4B-206ENST00000600078 CLASP1Q7Z460 1538 aa33.84■■■■□ 3.01
RAB4B-206ENST00000600078 AEBP2Q6ZN18 517 aaPredicted RBP33.83■■■■□ 3.01
RAB4B-206ENST00000600078 RAD54L2Q9Y4B4 1467 aa33.76■■■■□ 3
RAB4B-206ENST00000600078 SNAPC4Q5SXM2 1469 aa33.75■■■□□ 2.99
RAB4B-206ENST00000600078 TDRD9Q8NDG6 1382 aaKnown RBP33.72■■■□□ 2.99
RAB4B-206ENST00000600078 SYNJ1O43426 1573 aa33.71■■■□□ 2.99
RAB4B-206ENST00000600078 WDR97A6NE52 1622 aa33.69■■■□□ 2.98
RAB4B-206ENST00000600078 SOGA1O94964 1423 aa33.67■■■□□ 2.98
RAB4B-206ENST00000600078 MAGI1Q96QZ7 1491 aaPredicted RBP33.62■■■□□ 2.97
RAB4B-206ENST00000600078 CHMP7Q8WUX9 453 aaPredicted RBP33.57■■■□□ 2.96
RAB4B-206ENST00000600078 FGD5Q6ZNL6 1462 aa33.56■■■□□ 2.96
RAB4B-206ENST00000600078 SYNJ2O15056 1496 aa33.51■■■□□ 2.96
RAB4B-206ENST00000600078 GRIN2BQ13224 1484 aa33.51■■■□□ 2.96
RAB4B-206ENST00000600078 GAPVD1Q14C86 1478 aa33.48■■■□□ 2.95
RAB4B-206ENST00000600078 CUX1P39880 1505 aa33.42■■■□□ 2.94
RAB4B-206ENST00000600078 PBRM1Q86U86 1689 aa33.41■■■□□ 2.94
RAB4B-206ENST00000600078 ERCC6L2Q5T890 1561 aa33.25■■■□□ 2.91
RAB4B-206ENST00000600078 ABCA5Q8WWZ7 1642 aa33.21■■■□□ 2.91
RAB4B-206ENST00000600078 ABCA10Q8WWZ4 1543 aa33.13■■■□□ 2.89
RAB4B-206ENST00000600078 CEP170Q5SW79 1584 aa33.1■■■□□ 2.89
RAB4B-206ENST00000600078 GRIN2AQ12879 1464 aa33.1■■■□□ 2.89
RAB4B-206ENST00000600078 KIF13AQ9H1H9 1805 aa33.08■■■□□ 2.89
RAB4B-206ENST00000600078 NUP160Q12769 1436 aa33.02■■■□□ 2.88
RAB4B-206ENST00000600078 SHROOM2Q13796 1616 aa33.02■■■□□ 2.88
RAB4B-206ENST00000600078 ADAMTS12P58397 1594 aa33.02■■■□□ 2.88
RAB4B-206ENST00000600078 WRNQ14191 1432 aaPredicted RBP eCLIP33.02■■■□□ 2.88
RAB4B-206ENST00000600078 TOP2BQ02880 1626 aa32.9■■■□□ 2.86
RAB4B-206ENST00000600078 BIVM-ERCC5R4GMW8 1640 aa32.89■■■□□ 2.86
RAB4B-206ENST00000600078 FHAD1B1AJZ9 1412 aa32.82■■■□□ 2.84
RAB4B-206ENST00000600078 PRG4Q92954 1404 aaPredicted RBP32.74■■■□□ 2.83
RAB4B-206ENST00000600078 ABCC10Q5T3U5 1492 aa32.72■■■□□ 2.83
RAB4B-206ENST00000600078 ERICH3Q5RHP9 1530 aa32.71■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms