RNA–Protein interactions for RNA: ENST00000599981.5

DDX49-210, Transcript of DEAD-box helicase 49, humanhuman

TSL 2

Gene DDX49, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-210ENST00000599981 NISCHQ9Y2I1 1504 aa39.75■■■■□ 3.95
DDX49-210ENST00000599981 ABCC9O60706 1549 aa37.11■■■■□ 3.53
DDX49-210ENST00000599981 CCDC180Q9P1Z9 1646 aa36.18■■■■□ 3.38
DDX49-210ENST00000599981 DNAJC5BQ9UF47 199 aa35.61■■■■□ 3.29
DDX49-210ENST00000599981 RB1CC1Q8TDY2 1594 aa34.9■■■■□ 3.18
DDX49-210ENST00000599981 NACADO15069 1562 aa34.39■■■■□ 3.1
DDX49-210ENST00000599981 PABPN1Q86U42 306 aaKnown RBP eCLIP34.36■■■■□ 3.09
DDX49-210ENST00000599981 UNC13AQ9UPW8 1703 aa34.16■■■■□ 3.06
DDX49-210ENST00000599981 DCAF8L2P0C7V8 631 aa34.01■■■■□ 3.03
DDX49-210ENST00000599981 BICRAQ9NZM4 1560 aa33.89■■■■□ 3.02
DDX49-210ENST00000599981 MYO15BQ96JP2 1530 aa33.55■■■□□ 2.96
DDX49-210ENST00000599981 CECR2Q9BXF3 1484 aa33.53■■■□□ 2.96
DDX49-210ENST00000599981 CC2D2AQ9P2K1 1620 aa33.49■■■□□ 2.95
DDX49-210ENST00000599981 DNAJC5Q9H3Z4 198 aa33.44■■■□□ 2.94
DDX49-210ENST00000599981 SHROOM4Q9ULL8 1493 aa33.33■■■□□ 2.93
DDX49-210ENST00000599981 EIF4G1Q04637 1599 aaKnown RBP33.17■■■□□ 2.9
DDX49-210ENST00000599981 ZCCHC6Q5VYS8 1495 aaKnown RBP32.97■■■□□ 2.87
DDX49-210ENST00000599981 SCRIBQ14160 1630 aa32.91■■■□□ 2.86
DDX49-210ENST00000599981 DCAF1Q9Y4B6 1507 aa32.77■■■□□ 2.84
DDX49-210ENST00000599981 CUX2O14529 1486 aa32.39■■■□□ 2.78
DDX49-210ENST00000599981 ERCC6Q03468 1493 aa32.15■■■□□ 2.74
DDX49-210ENST00000599981 NCAPD3P42695 1498 aa31.72■■■□□ 2.67
DDX49-210ENST00000599981 TRIM41Q8WV44 630 aa31.64■■■□□ 2.66
DDX49-210ENST00000599981 NESP48681 1621 aa31.59■■■□□ 2.65
DDX49-210ENST00000599981 ATAD2BQ9ULI0 1458 aa31.51■■■□□ 2.63
DDX49-210ENST00000599981 THOC2Q8NI27 1593 aaKnown RBP31.51■■■□□ 2.63
DDX49-210ENST00000599981 HMGXB3Q12766 1538 aa31.44■■■□□ 2.62
DDX49-210ENST00000599981 SMARCA2P51531 1590 aa31.4■■■□□ 2.62
DDX49-210ENST00000599981 SMARCA4P51532 1647 aa31.27■■■□□ 2.6
DDX49-210ENST00000599981 LAMC3Q9Y6N6 1575 aa31.23■■■□□ 2.59
DDX49-210ENST00000599981 KIF21AQ7Z4S6 1674 aa31.22■■■□□ 2.59
DDX49-210ENST00000599981 BAZ1BQ9UIG0 1483 aaKnown RBP31.19■■■□□ 2.58
DDX49-210ENST00000599981 PDS5BQ9NTI5 1447 aa31.05■■■□□ 2.56
DDX49-210ENST00000599981 BAZ1AQ9NRL2 1556 aaPredicted RBP30.96■■■□□ 2.55
DDX49-210ENST00000599981 PEG3Q9GZU2 1588 aa30.94■■■□□ 2.54
DDX49-210ENST00000599981 MRC2Q9UBG0 1479 aa30.87■■■□□ 2.53
DDX49-210ENST00000599981 WDR62O43379 1518 aa30.83■■■□□ 2.53
DDX49-210ENST00000599981 CADPSQ9ULU8 1353 aa30.71■■■□□ 2.51
DDX49-210ENST00000599981 OSCARQ8IYS5 282 aa30.7■■■□□ 2.51
DDX49-210ENST00000599981 MROH2BQ7Z745 1585 aa30.63■■■□□ 2.49
DDX49-210ENST00000599981 CEP164Q9UPV0 1460 aa30.56■■■□□ 2.48
DDX49-210ENST00000599981 RIMBP3CA6NJZ7 1639 aa30.49■■■□□ 2.47
DDX49-210ENST00000599981 RIMBP3BA6NNM3 1639 aa30.49■■■□□ 2.47
DDX49-210ENST00000599981 RIMBP3Q9UFD9 1639 aa30.49■■■□□ 2.47
DDX49-210ENST00000599981 FANCD2Q9BXW9 1451 aa30.41■■■□□ 2.46
DDX49-210ENST00000599981 ARHGEF11O15085 1522 aa30.27■■■□□ 2.44
DDX49-210ENST00000599981 WIZO95785 1651 aa30.26■■■□□ 2.43
DDX49-210ENST00000599981 RSF1Q96T23 1441 aaPredicted RBP30.22■■■□□ 2.43
DDX49-210ENST00000599981 URB2Q14146 1524 aaKnown RBP30.22■■■□□ 2.43
DDX49-210ENST00000599981 CFTRP13569 1480 aa30.17■■■□□ 2.42
DDX49-210ENST00000599981 TRHP20396 242 aaPredicted RBP30.1■■■□□ 2.41
DDX49-210ENST00000599981 CYB5RLQ6IPT4 315 aa30.07■■■□□ 2.4
DDX49-210ENST00000599981 ZNF608Q9ULD9 1512 aaPredicted RBP30.01■■■□□ 2.4
DDX49-210ENST00000599981 AEBP2Q6ZN18 517 aaPredicted RBP29.97■■■□□ 2.39
DDX49-210ENST00000599981 IFT140Q96RY7 1462 aa29.96■■■□□ 2.39
DDX49-210ENST00000599981 PRDM2Q13029 1718 aa29.9■■■□□ 2.38
DDX49-210ENST00000599981 ARAP1Q96P48 1450 aa29.89■■■□□ 2.38
DDX49-210ENST00000599981 EIF4G3O43432 1585 aaKnown RBP29.86■■■□□ 2.37
DDX49-210ENST00000599981 TOP2AP11388 1531 aaKnown RBP29.85■■■□□ 2.37
DDX49-210ENST00000599981 CHD1O14646 1710 aa29.84■■■□□ 2.37
DDX49-210ENST00000599981 TOPBP1Q92547 1522 aa29.72■■■□□ 2.35
DDX49-210ENST00000599981 FBLN2P98095 1184 aa29.63■■■□□ 2.33
DDX49-210ENST00000599981 AQRO60306 1485 aaKnown RBP eCLIP29.6■■■□□ 2.33
DDX49-210ENST00000599981 SUPT5HO00267 1087 aaKnown RBP29.58■■■□□ 2.33
DDX49-210ENST00000599981 ABCC8Q09428 1581 aa29.58■■■□□ 2.33
DDX49-210ENST00000599981 DNMBPQ6XZF7 1577 aa29.55■■■□□ 2.32
DDX49-210ENST00000599981 TARBP1Q13395 1621 aaKnown RBP29.54■■■□□ 2.32
DDX49-210ENST00000599981 CCDC88BA6NC98 1476 aa29.54■■■□□ 2.32
DDX49-210ENST00000599981 CLASP1Q7Z460 1538 aa29.41■■■□□ 2.3
DDX49-210ENST00000599981 POLA1P09884 1462 aaPredicted RBP29.36■■■□□ 2.29
DDX49-210ENST00000599981 SYNJ1O43426 1573 aa29.33■■■□□ 2.29
DDX49-210ENST00000599981 SNAPC4Q5SXM2 1469 aa29.3■■■□□ 2.28
DDX49-210ENST00000599981 RAD54L2Q9Y4B4 1467 aa29.26■■■□□ 2.27
DDX49-210ENST00000599981 TDRD9Q8NDG6 1382 aaKnown RBP29.26■■■□□ 2.27
DDX49-210ENST00000599981 CHMP7Q8WUX9 453 aaPredicted RBP29.23■■■□□ 2.27
DDX49-210ENST00000599981 WDR97A6NE52 1622 aa29.18■■■□□ 2.26
DDX49-210ENST00000599981 SOGA1O94964 1423 aa29.18■■■□□ 2.26
DDX49-210ENST00000599981 GAPVD1Q14C86 1478 aa29.17■■■□□ 2.26
DDX49-210ENST00000599981 MAGI1Q96QZ7 1491 aaPredicted RBP29.17■■■□□ 2.26
DDX49-210ENST00000599981 SYNJ2O15056 1496 aa29.09■■■□□ 2.25
DDX49-210ENST00000599981 GRIN2BQ13224 1484 aa29.06■■■□□ 2.24
DDX49-210ENST00000599981 FGD5Q6ZNL6 1462 aa29.04■■■□□ 2.24
DDX49-210ENST00000599981 PBRM1Q86U86 1689 aa28.96■■■□□ 2.23
DDX49-210ENST00000599981 ERCC6L2Q5T890 1561 aa28.88■■■□□ 2.21
DDX49-210ENST00000599981 KIF13AQ9H1H9 1805 aa28.86■■■□□ 2.21
DDX49-210ENST00000599981 CUX1P39880 1505 aa28.84■■■□□ 2.21
DDX49-210ENST00000599981 CEP170Q5SW79 1584 aa28.75■■■□□ 2.19
DDX49-210ENST00000599981 ILDR1Q86SU0 546 aaPredicted RBP28.75■■■□□ 2.19
DDX49-210ENST00000599981 ABCA5Q8WWZ7 1642 aa28.72■■■□□ 2.19
DDX49-210ENST00000599981 GRIN2AQ12879 1464 aa28.7■■■□□ 2.18
DDX49-210ENST00000599981 SHROOM2Q13796 1616 aa28.64■■■□□ 2.18
DDX49-210ENST00000599981 ABCA10Q8WWZ4 1543 aa28.63■■■□□ 2.17
DDX49-210ENST00000599981 NUP160Q12769 1436 aa28.61■■■□□ 2.17
DDX49-210ENST00000599981 ADAMTS12P58397 1594 aa28.58■■■□□ 2.17
DDX49-210ENST00000599981 KDM4FA0A1W2PPD8 638 aa28.56■■■□□ 2.16
DDX49-210ENST00000599981 FAM69CQ0P6D2 419 aa28.53■■■□□ 2.16
DDX49-210ENST00000599981 ABCC10Q5T3U5 1492 aa28.52■■■□□ 2.16
DDX49-210ENST00000599981 KDM6BO15054 1643 aa28.5■■■□□ 2.15
DDX49-210ENST00000599981 WRNQ14191 1432 aaPredicted RBP eCLIP28.47■■■□□ 2.15
DDX49-210ENST00000599981 DIP2BQ9P265 1576 aa28.45■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms