RNA–Protein interactions for RNA: ENST00000599938.5

ZNF558-206, Transcript of zinc finger protein 558, humanhuman

TSL 5

Gene ZNF558, Length 780 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF558-206ENST00000599938 NISCHQ9Y2I1 1504 aa68.99■■■■■ 8.64
ZNF558-206ENST00000599938 CCDC180Q9P1Z9 1646 aa61.54■■■■■ 7.44
ZNF558-206ENST00000599938 ABCC9O60706 1549 aa60.5■■■■■ 7.28
ZNF558-206ENST00000599938 RB1CC1Q8TDY2 1594 aa58.06■■■■■ 6.88
ZNF558-206ENST00000599938 NACADO15069 1562 aa57.9■■■■■ 6.86
ZNF558-206ENST00000599938 DCAF8L2P0C7V8 631 aa57.73■■■■■ 6.83
ZNF558-206ENST00000599938 ZCCHC6Q5VYS8 1495 aaKnown RBP57.45■■■■■ 6.79
ZNF558-206ENST00000599938 MYO15BQ96JP2 1530 aa57.41■■■■■ 6.78
ZNF558-206ENST00000599938 DCAF1Q9Y4B6 1507 aa57.06■■■■■ 6.73
ZNF558-206ENST00000599938 UNC13AQ9UPW8 1703 aa56.76■■■■■ 6.68
ZNF558-206ENST00000599938 PABPN1Q86U42 306 aaKnown RBP eCLIP56.42■■■■■ 6.62
ZNF558-206ENST00000599938 BICRAQ9NZM4 1560 aa56.29■■■■■ 6.6
ZNF558-206ENST00000599938 SCRIBQ14160 1630 aa56.15■■■■■ 6.58
ZNF558-206ENST00000599938 DNAJC5BQ9UF47 199 aa55.7■■■■■ 6.51
ZNF558-206ENST00000599938 SHROOM4Q9ULL8 1493 aa55.69■■■■■ 6.51
ZNF558-206ENST00000599938 EIF4G1Q04637 1599 aaKnown RBP54.86■■■■■ 6.37
ZNF558-206ENST00000599938 CC2D2AQ9P2K1 1620 aa54.71■■■■■ 6.35
ZNF558-206ENST00000599938 CECR2Q9BXF3 1484 aa54.39■■■■■ 6.3
ZNF558-206ENST00000599938 SMARCA4P51532 1647 aa53.64■■■■■ 6.18
ZNF558-206ENST00000599938 BAZ1AQ9NRL2 1556 aaPredicted RBP53.53■■■■■ 6.16
ZNF558-206ENST00000599938 ATAD2BQ9ULI0 1458 aa53.39■■■■■ 6.14
ZNF558-206ENST00000599938 NCAPD3P42695 1498 aa53.38■■■■■ 6.14
ZNF558-206ENST00000599938 SMARCA2P51531 1590 aa53.35■■■■■ 6.13
ZNF558-206ENST00000599938 MROH2BQ7Z745 1585 aa53.17■■■■■ 6.1
ZNF558-206ENST00000599938 HMGXB3Q12766 1538 aa53.16■■■■■ 6.1
ZNF558-206ENST00000599938 PEG3Q9GZU2 1588 aa53.1■■■■■ 6.09
ZNF558-206ENST00000599938 BAZ1BQ9UIG0 1483 aaKnown RBP52.98■■■■■ 6.07
ZNF558-206ENST00000599938 WIZO95785 1651 aa52.61■■■■■ 6.01
ZNF558-206ENST00000599938 RSF1Q96T23 1441 aaPredicted RBP52.42■■■■■ 5.98
ZNF558-206ENST00000599938 NESP48681 1621 aa52.24■■■■■ 5.95
ZNF558-206ENST00000599938 ERCC6Q03468 1493 aa52.19■■■■■ 5.95
ZNF558-206ENST00000599938 LAMC3Q9Y6N6 1575 aa52.08■■■■■ 5.93
ZNF558-206ENST00000599938 TOP2AP11388 1531 aaKnown RBP52.05■■■■■ 5.92
ZNF558-206ENST00000599938 CADPSQ9ULU8 1353 aa51.81■■■■■ 5.88
ZNF558-206ENST00000599938 CUX2O14529 1486 aa51.73■■■■■ 5.87
ZNF558-206ENST00000599938 PDS5BQ9NTI5 1447 aa51.72■■■■■ 5.87
ZNF558-206ENST00000599938 KIF21AQ7Z4S6 1674 aa51.66■■■■■ 5.86
ZNF558-206ENST00000599938 THOC2Q8NI27 1593 aaKnown RBP51.57■■■■■ 5.85
ZNF558-206ENST00000599938 CFTRP13569 1480 aa51.46■■■■■ 5.83
ZNF558-206ENST00000599938 CCDC88BA6NC98 1476 aa51.38■■■■■ 5.82
ZNF558-206ENST00000599938 FANCD2Q9BXW9 1451 aa51.27■■■■■ 5.8
ZNF558-206ENST00000599938 CEP164Q9UPV0 1460 aa51.26■■■■■ 5.8
ZNF558-206ENST00000599938 MRC2Q9UBG0 1479 aa51.24■■■■■ 5.79
ZNF558-206ENST00000599938 PRDM2Q13029 1718 aa51.13■■■■■ 5.78
ZNF558-206ENST00000599938 WDR62O43379 1518 aa51.09■■■■■ 5.77
ZNF558-206ENST00000599938 SUPT5HO00267 1087 aaKnown RBP50.85■■■■■ 5.73
ZNF558-206ENST00000599938 URB2Q14146 1524 aaKnown RBP50.77■■■■■ 5.72
ZNF558-206ENST00000599938 TOPBP1Q92547 1522 aa50.41■■■■■ 5.66
ZNF558-206ENST00000599938 DNAJC5Q9H3Z4 198 aa50.41■■■■■ 5.66
ZNF558-206ENST00000599938 ABCC8Q09428 1581 aa50.36■■■■■ 5.65
ZNF558-206ENST00000599938 DNMBPQ6XZF7 1577 aa50.34■■■■■ 5.65
ZNF558-206ENST00000599938 IFT140Q96RY7 1462 aa50.17■■■■■ 5.62
ZNF558-206ENST00000599938 ZNF608Q9ULD9 1512 aaPredicted RBP49.97■■■■■ 5.59
ZNF558-206ENST00000599938 POLA1P09884 1462 aaPredicted RBP49.97■■■■■ 5.59
ZNF558-206ENST00000599938 CUX1P39880 1505 aa49.92■■■■■ 5.58
ZNF558-206ENST00000599938 TARBP1Q13395 1621 aaKnown RBP49.89■■■■■ 5.58
ZNF558-206ENST00000599938 EIF4G3O43432 1585 aaKnown RBP49.82■■■■■ 5.57
ZNF558-206ENST00000599938 FGD5Q6ZNL6 1462 aa49.81■■■■■ 5.56
ZNF558-206ENST00000599938 RAD54L2Q9Y4B4 1467 aa49.74■■■■■ 5.55
ZNF558-206ENST00000599938 SOGA1O94964 1423 aa49.71■■■■■ 5.55
ZNF558-206ENST00000599938 AQRO60306 1485 aaKnown RBP eCLIP49.63■■■■■ 5.536e-9■■■■□ 19.9
ZNF558-206ENST00000599938 WDR97A6NE52 1622 aa49.49■■■■■ 5.51
ZNF558-206ENST00000599938 TDRD9Q8NDG6 1382 aaKnown RBP49.48■■■■■ 5.51
ZNF558-206ENST00000599938 WRNQ14191 1432 aaPredicted RBP eCLIP49.47■■■■■ 5.51
ZNF558-206ENST00000599938 OSCARQ8IYS5 282 aa49.44■■■■■ 5.51
ZNF558-206ENST00000599938 BIVM-ERCC5R4GMW8 1640 aa49.42■■■■■ 5.5
ZNF558-206ENST00000599938 TOP2BQ02880 1626 aa49.41■■■■■ 5.5
ZNF558-206ENST00000599938 SYNJ1O43426 1573 aa49.4■■■■■ 5.5
ZNF558-206ENST00000599938 ABCA10Q8WWZ4 1543 aa49.29■■■■■ 5.48
ZNF558-206ENST00000599938 CHD1O14646 1710 aa49.25■■■■■ 5.47
ZNF558-206ENST00000599938 SNAPC4Q5SXM2 1469 aa49.22■■■■■ 5.47
ZNF558-206ENST00000599938 GRIN2BQ13224 1484 aa49.2■■■■■ 5.47
ZNF558-206ENST00000599938 GAPVD1Q14C86 1478 aa49.17■■■■■ 5.46
ZNF558-206ENST00000599938 ABCA5Q8WWZ7 1642 aa49.16■■■■■ 5.46
ZNF558-206ENST00000599938 PBRM1Q86U86 1689 aa49.15■■■■■ 5.46
ZNF558-206ENST00000599938 MAGI1Q96QZ7 1491 aaPredicted RBP49.12■■■■■ 5.45
ZNF558-206ENST00000599938 FBLN2P98095 1184 aa49.09■■■■■ 5.45
ZNF558-206ENST00000599938 SYNJ2O15056 1496 aa48.93■■■■■ 5.42
ZNF558-206ENST00000599938 CHMP7Q8WUX9 453 aaPredicted RBP48.89■■■■■ 5.42
ZNF558-206ENST00000599938 RIMBP3CA6NJZ7 1639 aa48.79■■■■■ 5.4
ZNF558-206ENST00000599938 RIMBP3BA6NNM3 1639 aa48.79■■■■■ 5.4
ZNF558-206ENST00000599938 RIMBP3Q9UFD9 1639 aa48.79■■■■■ 5.4
ZNF558-206ENST00000599938 ARHGEF11O15085 1522 aa48.74■■■■■ 5.39
ZNF558-206ENST00000599938 ADAMTS12P58397 1594 aa48.74■■■■■ 5.39
ZNF558-206ENST00000599938 TRIM41Q8WV44 630 aa48.71■■■■■ 5.39
ZNF558-206ENST00000599938 ERICH3Q5RHP9 1530 aa48.71■■■■■ 5.39
ZNF558-206ENST00000599938 CLASP1Q7Z460 1538 aa48.68■■■■■ 5.38
ZNF558-206ENST00000599938 GRIN2AQ12879 1464 aa48.6■■■■■ 5.37
ZNF558-206ENST00000599938 FHAD1B1AJZ9 1412 aa48.58■■■■■ 5.37
ZNF558-206ENST00000599938 KIF27Q86VH2 1401 aa48.46■■■■■ 5.35
ZNF558-206ENST00000599938 CEP170Q5SW79 1584 aa48.38■■■■■ 5.33
ZNF558-206ENST00000599938 NUP160Q12769 1436 aa48.37■■■■■ 5.33
ZNF558-206ENST00000599938 ARAP1Q96P48 1450 aa48.33■■■■■ 5.33
ZNF558-206ENST00000599938 CUL7Q14999 1698 aa48.24■■■■■ 5.31
ZNF558-206ENST00000599938 IGF1RP08069 1367 aa48.24■■■■■ 5.31
ZNF558-206ENST00000599938 CYB5RLQ6IPT4 315 aa48.23■■■■■ 5.31
ZNF558-206ENST00000599938 SHROOM2Q13796 1616 aa48.06■■■■■ 5.28
ZNF558-206ENST00000599938 RUSC2Q8N2Y8 1516 aa48.03■■■■■ 5.28
ZNF558-206ENST00000599938 ERCC6L2Q5T890 1561 aa47.98■■■■■ 5.27
ZNF558-206ENST00000599938 CARMIL1Q5VZK9 1371 aa47.98■■■■■ 5.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms