RNA–Protein interactions for RNA: ENST00000599926.5

SPTBN4-214, Transcript of spectrin beta, non-erythrocytic 4, humanhuman

TSL 3

Gene SPTBN4, Length 525 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4-214ENST00000599926 NISCHQ9Y2I1 1504 aa33.02■■■□□ 2.88
SPTBN4-214ENST00000599926 CCDC180Q9P1Z9 1646 aa29.45■■■□□ 2.31
SPTBN4-214ENST00000599926 ABCC9O60706 1549 aa29.35■■■□□ 2.29
SPTBN4-214ENST00000599926 RB1CC1Q8TDY2 1594 aa27.99■■■□□ 2.07
SPTBN4-214ENST00000599926 NACADO15069 1562 aa27.86■■■□□ 2.05
SPTBN4-214ENST00000599926 DCAF8L2P0C7V8 631 aa27.84■■■□□ 2.05
SPTBN4-214ENST00000599926 MYO15BQ96JP2 1530 aa27.57■■■□□ 2
SPTBN4-214ENST00000599926 DNAJC5BQ9UF47 199 aa27.42■■□□□ 1.98
SPTBN4-214ENST00000599926 PABPN1Q86U42 306 aaKnown RBP eCLIP27.41■■□□□ 1.98
SPTBN4-214ENST00000599926 ZCCHC6Q5VYS8 1495 aaKnown RBP27.4■■□□□ 1.98
SPTBN4-214ENST00000599926 DCAF1Q9Y4B6 1507 aa27.29■■□□□ 1.96
SPTBN4-214ENST00000599926 UNC13AQ9UPW8 1703 aa27.24■■□□□ 1.95
SPTBN4-214ENST00000599926 BICRAQ9NZM4 1560 aa27.18■■□□□ 1.94
SPTBN4-214ENST00000599926 SCRIBQ14160 1630 aa26.88■■□□□ 1.89
SPTBN4-214ENST00000599926 SHROOM4Q9ULL8 1493 aa26.84■■□□□ 1.89
SPTBN4-214ENST00000599926 EIF4G1Q04637 1599 aaKnown RBP26.49■■□□□ 1.83
SPTBN4-214ENST00000599926 CC2D2AQ9P2K1 1620 aa26.48■■□□□ 1.83
SPTBN4-214ENST00000599926 CECR2Q9BXF3 1484 aa26.42■■□□□ 1.82
SPTBN4-214ENST00000599926 NCAPD3P42695 1498 aa25.78■■□□□ 1.72
SPTBN4-214ENST00000599926 ATAD2BQ9ULI0 1458 aa25.71■■□□□ 1.71
SPTBN4-214ENST00000599926 SMARCA4P51532 1647 aa25.67■■□□□ 1.7
SPTBN4-214ENST00000599926 SMARCA2P51531 1590 aa25.61■■□□□ 1.69
SPTBN4-214ENST00000599926 BAZ1AQ9NRL2 1556 aaPredicted RBP25.61■■□□□ 1.69
SPTBN4-214ENST00000599926 HMGXB3Q12766 1538 aa25.54■■□□□ 1.68
SPTBN4-214ENST00000599926 MROH2BQ7Z745 1585 aa25.45■■□□□ 1.66
SPTBN4-214ENST00000599926 BAZ1BQ9UIG0 1483 aaKnown RBP25.45■■□□□ 1.66
SPTBN4-214ENST00000599926 PEG3Q9GZU2 1588 aa25.44■■□□□ 1.66
SPTBN4-214ENST00000599926 ERCC6Q03468 1493 aa25.31■■□□□ 1.64
SPTBN4-214ENST00000599926 NESP48681 1621 aa25.26■■□□□ 1.63
SPTBN4-214ENST00000599926 CUX2O14529 1486 aa25.2■■□□□ 1.62
SPTBN4-214ENST00000599926 WIZO95785 1651 aa25.1■■□□□ 1.61
SPTBN4-214ENST00000599926 LAMC3Q9Y6N6 1575 aa25.1■■□□□ 1.61
SPTBN4-214ENST00000599926 RSF1Q96T23 1441 aaPredicted RBP25.03■■□□□ 1.6
SPTBN4-214ENST00000599926 DNAJC5Q9H3Z4 198 aa25.02■■□□□ 1.6
SPTBN4-214ENST00000599926 CADPSQ9ULU8 1353 aa25.01■■□□□ 1.59
SPTBN4-214ENST00000599926 PDS5BQ9NTI5 1447 aa24.99■■□□□ 1.59
SPTBN4-214ENST00000599926 THOC2Q8NI27 1593 aaKnown RBP24.92■■□□□ 1.58
SPTBN4-214ENST00000599926 KIF21AQ7Z4S6 1674 aa24.85■■□□□ 1.57
SPTBN4-214ENST00000599926 TOP2AP11388 1531 aaKnown RBP24.83■■□□□ 1.57
SPTBN4-214ENST00000599926 CFTRP13569 1480 aa24.75■■□□□ 1.55
SPTBN4-214ENST00000599926 MRC2Q9UBG0 1479 aa24.75■■□□□ 1.55
SPTBN4-214ENST00000599926 FANCD2Q9BXW9 1451 aa24.69■■□□□ 1.54
SPTBN4-214ENST00000599926 CEP164Q9UPV0 1460 aa24.68■■□□□ 1.54
SPTBN4-214ENST00000599926 WDR62O43379 1518 aa24.66■■□□□ 1.54
SPTBN4-214ENST00000599926 CCDC88BA6NC98 1476 aa24.59■■□□□ 1.53
SPTBN4-214ENST00000599926 URB2Q14146 1524 aaKnown RBP24.47■■□□□ 1.51
SPTBN4-214ENST00000599926 PRDM2Q13029 1718 aa24.34■■□□□ 1.49
SPTBN4-214ENST00000599926 TOPBP1Q92547 1522 aa24.24■■□□□ 1.47
SPTBN4-214ENST00000599926 ABCC8Q09428 1581 aa24.2■■□□□ 1.47
SPTBN4-214ENST00000599926 IFT140Q96RY7 1462 aa24.19■■□□□ 1.46
SPTBN4-214ENST00000599926 OSCARQ8IYS5 282 aa24.15■■□□□ 1.46
SPTBN4-214ENST00000599926 ZNF608Q9ULD9 1512 aaPredicted RBP24.15■■□□□ 1.46
SPTBN4-214ENST00000599926 DNMBPQ6XZF7 1577 aa24.14■■□□□ 1.45
SPTBN4-214ENST00000599926 SUPT5HO00267 1087 aaKnown RBP24.09■■□□□ 1.45
SPTBN4-214ENST00000599926 POLA1P09884 1462 aaPredicted RBP24■■□□□ 1.43
SPTBN4-214ENST00000599926 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
SPTBN4-214ENST00000599926 AQRO60306 1485 aaKnown RBP eCLIP23.97■■□□□ 1.43
SPTBN4-214ENST00000599926 TARBP1Q13395 1621 aaKnown RBP23.97■■□□□ 1.43
SPTBN4-214ENST00000599926 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.43
SPTBN4-214ENST00000599926 SOGA1O94964 1423 aa23.93■■□□□ 1.42
SPTBN4-214ENST00000599926 RAD54L2Q9Y4B4 1467 aa23.93■■□□□ 1.42
SPTBN4-214ENST00000599926 CUX1P39880 1505 aa23.89■■□□□ 1.42
SPTBN4-214ENST00000599926 FGD5Q6ZNL6 1462 aa23.88■■□□□ 1.41
SPTBN4-214ENST00000599926 TDRD9Q8NDG6 1382 aaKnown RBP23.87■■□□□ 1.41
SPTBN4-214ENST00000599926 FBLN2P98095 1184 aa23.78■■□□□ 1.4
SPTBN4-214ENST00000599926 WDR97A6NE52 1622 aa23.73■■□□□ 1.39
SPTBN4-214ENST00000599926 RIMBP3CA6NJZ7 1639 aa23.7■■□□□ 1.39
SPTBN4-214ENST00000599926 RIMBP3BA6NNM3 1639 aa23.7■■□□□ 1.39
SPTBN4-214ENST00000599926 RIMBP3Q9UFD9 1639 aa23.7■■□□□ 1.39
SPTBN4-214ENST00000599926 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.38
SPTBN4-214ENST00000599926 ARHGEF11O15085 1522 aa23.69■■□□□ 1.38
SPTBN4-214ENST00000599926 CHD1O14646 1710 aa23.69■■□□□ 1.38
SPTBN4-214ENST00000599926 GRIN2BQ13224 1484 aa23.68■■□□□ 1.38
SPTBN4-214ENST00000599926 MAGI1Q96QZ7 1491 aaPredicted RBP23.65■■□□□ 1.38
SPTBN4-214ENST00000599926 CHMP7Q8WUX9 453 aaPredicted RBP23.65■■□□□ 1.38
SPTBN4-214ENST00000599926 ABCA10Q8WWZ4 1543 aa23.64■■□□□ 1.37
SPTBN4-214ENST00000599926 GAPVD1Q14C86 1478 aa23.62■■□□□ 1.37
SPTBN4-214ENST00000599926 WRNQ14191 1432 aaPredicted RBP eCLIP23.59■■□□□ 1.37
SPTBN4-214ENST00000599926 SYNJ2O15056 1496 aa23.57■■□□□ 1.36
SPTBN4-214ENST00000599926 CYB5RLQ6IPT4 315 aa23.56■■□□□ 1.36
SPTBN4-214ENST00000599926 TOP2BQ02880 1626 aa23.54■■□□□ 1.36
SPTBN4-214ENST00000599926 ABCA5Q8WWZ7 1642 aa23.53■■□□□ 1.36
SPTBN4-214ENST00000599926 SYNJ1O43426 1573 aa23.52■■□□□ 1.36
SPTBN4-214ENST00000599926 BIVM-ERCC5R4GMW8 1640 aa23.51■■□□□ 1.35
SPTBN4-214ENST00000599926 CLASP1Q7Z460 1538 aa23.5■■□□□ 1.35
SPTBN4-214ENST00000599926 ARAP1Q96P48 1450 aa23.49■■□□□ 1.35
SPTBN4-214ENST00000599926 PBRM1Q86U86 1689 aa23.48■■□□□ 1.35
SPTBN4-214ENST00000599926 GRIN2AQ12879 1464 aa23.36■■□□□ 1.33
SPTBN4-214ENST00000599926 FHAD1B1AJZ9 1412 aa23.34■■□□□ 1.33
SPTBN4-214ENST00000599926 ADAMTS12P58397 1594 aa23.34■■□□□ 1.33
SPTBN4-214ENST00000599926 ERICH3Q5RHP9 1530 aa23.33■■□□□ 1.32
SPTBN4-214ENST00000599926 NUP160Q12769 1436 aa23.3■■□□□ 1.32
SPTBN4-214ENST00000599926 CEP170Q5SW79 1584 aa23.24■■□□□ 1.31
SPTBN4-214ENST00000599926 TRHP20396 242 aaPredicted RBP23.22■■□□□ 1.31
SPTBN4-214ENST00000599926 ERCC6L2Q5T890 1561 aa23.16■■□□□ 1.3
SPTBN4-214ENST00000599926 IGF1RP08069 1367 aa23.14■■□□□ 1.3
SPTBN4-214ENST00000599926 KIF27Q86VH2 1401 aa23.14■■□□□ 1.29
SPTBN4-214ENST00000599926 SHROOM2Q13796 1616 aa23.11■■□□□ 1.29
SPTBN4-214ENST00000599926 JPH4Q96JJ6 628 aa23.1■■□□□ 1.29
SPTBN4-214ENST00000599926 PRG4Q92954 1404 aaPredicted RBP23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms